RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 MALP21145 153 aa13.59□□□□□ -0.23
RPUSD3-206ENST00000433535 SVBPQ8N300 66 aa13.59□□□□□ -0.23
RPUSD3-206ENST00000433535 LAMTOR2Q9Y2Q5 125 aa13.59□□□□□ -0.23
RPUSD3-206ENST00000433535 CSDC2Q9Y534 153 aaKnown RBP13.59□□□□□ -0.23
RPUSD3-206ENST00000433535 C1orf196B1AJZ1 125 aa13.58□□□□□ -0.24
RPUSD3-206ENST00000433535 COX7A2LO14548 114 aa13.58□□□□□ -0.24
RPUSD3-206ENST00000433535 NDUFA5Q16718 116 aa13.58□□□□□ -0.24
RPUSD3-206ENST00000433535 SNAPINO95295 136 aa13.57□□□□□ -0.24
RPUSD3-206ENST00000433535 PTTG1IPP53801 180 aa13.57□□□□□ -0.24
RPUSD3-206ENST00000433535 GAGE2BQ13066 116 aa13.57□□□□□ -0.24
RPUSD3-206ENST00000433535 ODF1Q14990 250 aa13.57□□□□□ -0.24
RPUSD3-206ENST00000433535 LINC01600Q96MT4 127 aa13.57□□□□□ -0.24
RPUSD3-206ENST00000433535 TCAPO15273 167 aa13.56□□□□□ -0.24
RPUSD3-206ENST00000433535 SMAGPQ0VAQ4 97 aa13.56□□□□□ -0.24
RPUSD3-206ENST00000433535 SLC7A5P1Q8MH63 180 aa13.56□□□□□ -0.24
RPUSD3-206ENST00000433535 GNB1LQ9BYB4 327 aa13.56□□□□□ -0.24
RPUSD3-206ENST00000433535 C5orf38Q86SI9 138 aa13.55□□□□□ -0.24
RPUSD3-206ENST00000433535 CAMK2N2Q96S95 79 aa13.55□□□□□ -0.24
RPUSD3-206ENST00000433535 LOC107984640A0A0U1RRK4 108 aa13.54□□□□□ -0.24
RPUSD3-206ENST00000433535 UBR4Q5T4S7 5183 aa13.54□□□□□ -0.24
RPUSD3-206ENST00000433535 RPL39P62891 51 aaKnown RBP13.53□□□□□ -0.24
RPUSD3-206ENST00000433535 MAP1LC3AQ9H492 121 aa13.53□□□□□ -0.24
RPUSD3-206ENST00000433535 LOC389332A0A1B0GUA5 103 aa13.52□□□□□ -0.25
RPUSD3-206ENST00000433535 KIAA1644Q3SXP7 199 aa13.52□□□□□ -0.25
RPUSD3-206ENST00000433535 COX19Q49B96 90 aa13.52□□□□□ -0.25
RPUSD3-206ENST00000433535 SPINK6Q6UWN8 80 aa13.52□□□□□ -0.25
RPUSD3-206ENST00000433535 Q6ZRP5 223 aa13.52□□□□□ -0.25
RPUSD3-206ENST00000433535 TMEM18Q96B42 140 aa13.52□□□□□ -0.25
RPUSD3-206ENST00000433535 TIMM21Q9BVV7 248 aa13.52□□□□□ -0.25
RPUSD3-206ENST00000433535 A0A1W2PNN7 141 aa13.51□□□□□ -0.25
RPUSD3-206ENST00000433535 APOMO95445 188 aa13.51□□□□□ -0.25
RPUSD3-206ENST00000433535 SPAG11BQ08648 103 aa13.51□□□□□ -0.25
RPUSD3-206ENST00000433535 Q8N8P6 123 aa13.51□□□□□ -0.25
RPUSD3-206ENST00000433535 TGIF2-C20orf24A0A0A6YYL0 155 aa13.5□□□□□ -0.25
RPUSD3-206ENST00000433535 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.5□□□□□ -0.25
RPUSD3-206ENST00000433535 RPL18AQ02543 176 aaKnown RBP13.5□□□□□ -0.25
RPUSD3-206ENST00000433535 FAM104AQ969W3 186 aa13.5□□□□□ -0.25
RPUSD3-206ENST00000433535 A0A0J9YXV3 536 aa13.49□□□□□ -0.25
RPUSD3-206ENST00000433535 MT-ND6P03923 174 aa13.49□□□□□ -0.25
RPUSD3-206ENST00000433535 RAB5AP20339 215 aa13.49□□□□□ -0.25
RPUSD3-206ENST00000433535 C2orf48Q96LS8 159 aa13.49□□□□□ -0.25
RPUSD3-206ENST00000433535 OPRPNQ99935 248 aaPredicted RBP13.49□□□□□ -0.25
RPUSD3-206ENST00000433535 SRSF9Q13242 221 aaKnown RBP eCLIP13.48□□□□□ -0.25
RPUSD3-206ENST00000433535 REG3GQ6UW15 175 aa13.48□□□□□ -0.25
RPUSD3-206ENST00000433535 YPEL4Q96NS1 127 aa13.48□□□□□ -0.25
RPUSD3-206ENST00000433535 ALKBH7Q9BT30 221 aaPredicted RBP13.47□□□□□ -0.25
RPUSD3-206ENST00000433535 MRPL18Q9H0U6 180 aaKnown RBP13.47□□□□□ -0.25
RPUSD3-206ENST00000433535 IFI27P40305 119 aaPredicted RBP13.46□□□□□ -0.25
RPUSD3-206ENST00000433535 C9orf116Q5BN46 136 aaPredicted RBP13.46□□□□□ -0.25
RPUSD3-206ENST00000433535 NXT2Q9NPJ8 142 aaKnown RBP13.46□□□□□ -0.25
RPUSD3-206ENST00000433535 SPANXA1Q9NS26 97 aa13.46□□□□□ -0.25
RPUSD3-206ENST00000433535 TNXBP22105 4242 aa13.45□□□□□ -0.26
RPUSD3-206ENST00000433535 ORAOV1Q8WV07 137 aa13.45□□□□□ -0.26
RPUSD3-206ENST00000433535 K7EMI3 77 aa13.44□□□□□ -0.26
RPUSD3-206ENST00000433535 FABP9Q0Z7S8 132 aa13.44□□□□□ -0.26
RPUSD3-206ENST00000433535 OR10D4PQ8NGN7 298 aa13.44□□□□□ -0.26
RPUSD3-206ENST00000433535 IGHV3OR16-9A0A0B4J2B5 98 aa13.43□□□□□ -0.26
RPUSD3-206ENST00000433535 IFITM10A6NMD0 228 aa13.43□□□□□ -0.26
RPUSD3-206ENST00000433535 KRTAP10-8P60410 259 aa13.43□□□□□ -0.26
RPUSD3-206ENST00000433535 MRPS36P82909 103 aaKnown RBP13.43□□□□□ -0.26
RPUSD3-206ENST00000433535 PYGO1Q9Y3Y4 419 aa13.43□□□□□ -0.26
RPUSD3-206ENST00000433535 ORMDL2Q53FV1 153 aa13.42□□□□□ -0.26
RPUSD3-206ENST00000433535 PHF5AQ7RTV0 110 aaKnown RBP13.42□□□□□ -0.26
RPUSD3-206ENST00000433535 PSORS1C2Q9UIG4 136 aa13.42□□□□□ -0.26
RPUSD3-206ENST00000433535 TRAPPC1Q9Y5R8 145 aa13.41□□□□□ -0.26
RPUSD3-206ENST00000433535 LINC01546A6NGU7 62 aa13.4□□□□□ -0.26
RPUSD3-206ENST00000433535 RNF151Q2KHN1 245 aa13.4□□□□□ -0.26
RPUSD3-206ENST00000433535 C10orf25Q5T742 122 aa13.4□□□□□ -0.26
RPUSD3-206ENST00000433535 C2orf66Q6UXQ4 117 aa13.4□□□□□ -0.26
RPUSD3-206ENST00000433535 MRPL35Q9NZE8 188 aaKnown RBP13.4□□□□□ -0.26
RPUSD3-206ENST00000433535 CBLN2Q8IUK8 224 aa13.39□□□□□ -0.27
RPUSD3-206ENST00000433535 CYSLTR1Q9Y271 337 aa13.39□□□□□ -0.27
RPUSD3-206ENST00000433535 IGLV4-3A0A075B6K6 122 aa13.38□□□□□ -0.27
RPUSD3-206ENST00000433535 NDUFA1O15239 70 aa13.38□□□□□ -0.27
RPUSD3-206ENST00000433535 SMCO4Q9NRQ5 59 aa13.38□□□□□ -0.27
RPUSD3-206ENST00000433535 C1orf137Q5JT78 98 aa13.37□□□□□ -0.27
RPUSD3-206ENST00000433535 UNQ6190/PRO20217Q6UXQ8 127 aa13.37□□□□□ -0.27
RPUSD3-206ENST00000433535 FAM168BA1KXE4 195 aa13.36□□□□□ -0.27
RPUSD3-206ENST00000433535 IGIPA6NJ69 53 aa13.36□□□□□ -0.27
RPUSD3-206ENST00000433535 C6orf48Q9UBA6 75 aa13.36□□□□□ -0.27
RPUSD3-206ENST00000433535 F8WDY8 70 aa13.35□□□□□ -0.27
RPUSD3-206ENST00000433535 C18orf32Q8TCD1 76 aa13.34□□□□□ -0.27
RPUSD3-206ENST00000433535 TOMM6Q96B49 74 aa13.34□□□□□ -0.27
RPUSD3-206ENST00000433535 TMEM141Q96I45 108 aa13.34□□□□□ -0.27
RPUSD3-206ENST00000433535 LRP2P98164 4655 aa13.33□□□□□ -0.27
RPUSD3-206ENST00000433535 NPSP0C0P6 89 aa13.33□□□□□ -0.28
RPUSD3-206ENST00000433535 G0S2P27469 103 aa13.33□□□□□ -0.28
RPUSD3-206ENST00000433535 GAGE2EQ4V326 116 aa13.33□□□□□ -0.28
RPUSD3-206ENST00000433535 LINC00242Q5T6M2 205 aa13.33□□□□□ -0.28
RPUSD3-206ENST00000433535 LINC00173Q6ZV60 143 aa13.33□□□□□ -0.28
RPUSD3-206ENST00000433535 FAM19A5Q7Z5A7 132 aaPredicted RBP13.33□□□□□ -0.28
RPUSD3-206ENST00000433535 GAGE2DQ9UEU5 116 aa13.33□□□□□ -0.28
RPUSD3-206ENST00000433535 TLX1NBP0CAT3 122 aa13.32□□□□□ -0.28
RPUSD3-206ENST00000433535 KRTAP11-1Q8IUC1 163 aa13.32□□□□□ -0.28
RPUSD3-206ENST00000433535 URB1-AS1Q96HZ7 61 aa13.32□□□□□ -0.28
RPUSD3-206ENST00000433535 AMELXQ99217 191 aa13.32□□□□□ -0.28
RPUSD3-206ENST00000433535 A0A087WZ39 114 aa13.31□□□□□ -0.28
RPUSD3-206ENST00000433535 KIAA0087Q14695 138 aa13.31□□□□□ -0.28
RPUSD3-206ENST00000433535 ZC2HC1BQ5TFG8 222 aa13.31□□□□□ -0.28
RPUSD3-206ENST00000433535 FA2HQ7L5A8 372 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms