RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 HCP5Q6MZN7 132 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 Q6ZQT0 140 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 C17orf82Q86X59 251 aaPredicted RBP3.75□□□□□ -1.81
PTPN4-203ENST00000430976 TFF2Q03403 129 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 VPS13AQ96RL7 3174 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 C5orf42Q9H799 3197 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV4-61A0A0C4DH41 118 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 BCE1O60756 84 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV4-59P01825 116 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 LINC00208Q96KT6 92 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 C7orf69Q9H7B7 122 aa3.75□□□□□ -1.81
PTPN4-203ENST00000430976 MGAMO43451 1857 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 IGLV2-14P01704 120 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 MIR7-3HGQ8N6C7 128 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 KIF25-AS1Q9Y6Z4 181 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 SSC5DA1L4H1 1573 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 ADAMTS20P59510 1910 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 CEP192Q8TEP8 1941 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 IGKV2-40A0A087WW87 121 aaPredicted RBP3.74□□□□□ -1.81
PTPN4-203ENST00000430976 IGKV2D-40P01614 121 aaPredicted RBP3.74□□□□□ -1.81
PTPN4-203ENST00000430976 FAM167A-AS1Q96KT0 104 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV4-30-4P0DP06 118 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 IGFL4Q6B9Z1 124 aa3.74□□□□□ -1.81
PTPN4-203ENST00000430976 C1orf229Q6ZS94 237 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-203ENST00000430976 CAMK2N2Q96S95 79 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 ABCA2Q9BZC7 2435 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 BDP1A6H8Y1 2624 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV3-38A0A0C4DH36 116 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 JMJD7-PLA2G4BH0Y9G9 81 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 ROMO1P60602 79 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 DNAH12Q6ZR08 3092 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 LY6G6EA0A0G2JKS1 128 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 F8W735 103 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-203ENST00000430976 TMEM14CQ9P0S9 112 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 HIVEP3Q5T1R4 2406 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 HIVEP2P31629 2446 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV4-30-2A0A087WSY4 118 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV4-28A0A0C4DH34 117 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 SAA2P0DJI9 122 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-203ENST00000430976 Q8NAQ8 132 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 S4R3C0 116 aa3.73□□□□□ -1.81
PTPN4-203ENST00000430976 CCDC168Q8NDH2 2452 aa3.72□□□□□ -1.81
PTPN4-203ENST00000430976 CCL4P13236 92 aa3.72□□□□□ -1.81
PTPN4-203ENST00000430976 CD52P31358 61 aa3.72□□□□□ -1.81
PTPN4-203ENST00000430976 RPL39P62891 51 aaKnown RBP3.72□□□□□ -1.81
PTPN4-203ENST00000430976 F8P00451 2351 aa3.72□□□□□ -1.81
PTPN4-203ENST00000430976 SMIM2Q9BVW6 85 aa3.72□□□□□ -1.81
PTPN4-203ENST00000430976 IGLV1-51P01701 117 aa3.72□□□□□ -1.81
PTPN4-203ENST00000430976 RPL39LQ96EH5 51 aaKnown RBP3.72□□□□□ -1.81
PTPN4-203ENST00000430976 MRPL36Q9P0J6 103 aaKnown RBP3.72□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV3OR16-8A0A075B7F1 116 aa3.71□□□□□ -1.81
PTPN4-203ENST00000430976 IGHV3-74A0A0B4J1X5 117 aa3.71□□□□□ -1.81
PTPN4-203ENST00000430976 TRBV6-5A0A0K0K1A5 114 aa3.71□□□□□ -1.81
PTPN4-203ENST00000430976 Q6ZTC4 211 aa3.71□□□□□ -1.81
PTPN4-203ENST00000430976 A0A0J9YX75 114 aa3.71□□□□□ -1.82
PTPN4-203ENST00000430976 KLK9Q9UKQ9 250 aa3.71□□□□□ -1.82
PTPN4-203ENST00000430976 A0A0G2JMZ2 1700 aa3.71□□□□□ -1.82
PTPN4-203ENST00000430976 LRRC37A2A6NM11 1700 aa3.71□□□□□ -1.82
PTPN4-203ENST00000430976 IGHV3-20A0A0C4DH32 117 aa3.71□□□□□ -1.82
PTPN4-203ENST00000430976 DEFB113Q30KQ7 82 aa3.71□□□□□ -1.82
PTPN4-203ENST00000430976 C10orf55Q5SWW7 151 aa3.71□□□□□ -1.82
PTPN4-203ENST00000430976 TCF20Q9UGU0 1960 aaKnown RBP3.71□□□□□ -1.82
PTPN4-203ENST00000430976 WDFY3Q8IZQ1 3526 aa3.71□□□□□ -1.82
PTPN4-203ENST00000430976 IGHV4-4A0A075B6R2 117 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 LHBP01229 141 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 Q6ZTI0 123 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 CRIP1P50238 77 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 NBEAQ8NFP9 2946 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 DOPEY1Q5JWR5 2465 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 IGHV7-81A0A0B4J1V7 117 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 IGHV3-35A0A0C4DH35 117 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 TRBV6-1A0A0K0K1D8 114 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 NDUFB1O75438 58 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 IGLV2-11P01706 119 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 COX6B1P14854 86 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 LINC01600Q96MT4 127 aa3.7□□□□□ -1.82
PTPN4-203ENST00000430976 CFAP54Q96N23 3096 aa3.69□□□□□ -1.82
PTPN4-203ENST00000430976 Q8N9L7 120 aa3.69□□□□□ -1.82
PTPN4-203ENST00000430976 SMAD5-AS1Q9Y6J3 95 aa3.69□□□□□ -1.82
PTPN4-203ENST00000430976 NDUFA4O00483 81 aa3.69□□□□□ -1.82
PTPN4-203ENST00000430976 CCL5P13501 91 aa3.69□□□□□ -1.82
PTPN4-203ENST00000430976 C9orf106Q8NAJ2 232 aa3.69□□□□□ -1.82
PTPN4-203ENST00000430976 TRBV7-4A0A0J9YYF1 115 aa3.69□□□□□ -1.82
PTPN4-203ENST00000430976 ADAMTS9Q9P2N4 1935 aa3.68□□□□□ -1.82
PTPN4-203ENST00000430976 Q8N9P0 234 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-203ENST00000430976 PATE1Q8WXA2 126 aa3.68□□□□□ -1.82
PTPN4-203ENST00000430976 FAM208BQ5VWN6 2430 aa3.68□□□□□ -1.82
PTPN4-203ENST00000430976 COL5A1P20908 1838 aaPredicted RBP3.68□□□□□ -1.82
PTPN4-203ENST00000430976 H0YGX0 51 aa3.68□□□□□ -1.82
PTPN4-203ENST00000430976 TMEM190Q8WZ59 177 aa3.68□□□□□ -1.82
PTPN4-203ENST00000430976 A0A087WYN8 130 aa3.67□□□□□ -1.82
PTPN4-203ENST00000430976 IGHV4-38-2P0DP08 117 aa3.67□□□□□ -1.82
PTPN4-203ENST00000430976 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.67□□□□□ -1.82
PTPN4-203ENST00000430976 INSP01308 110 aa3.67□□□□□ -1.82
PTPN4-203ENST00000430976 C9orf129Q5T035 196 aaKnown RBP3.67□□□□□ -1.82
PTPN4-203ENST00000430976 DSCR9P59020 149 aa3.67□□□□□ -1.82
PTPN4-203ENST00000430976 CCL4L1Q8NHW4 92 aa3.67□□□□□ -1.82
PTPN4-203ENST00000430976 CDC42SE2Q9NRR3 84 aa3.67□□□□□ -1.82
PTPN4-203ENST00000430976 LY6G5CQ5SRR4 150 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms