RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 C9JQL5 133 aa5.8□□□□□ -1.48
HDAC9-211ENST00000430454 D6R8Y8 96 aa5.8□□□□□ -1.48
HDAC9-211ENST00000430454 PANO1I0J062 215 aa5.8□□□□□ -1.48
HDAC9-211ENST00000430454 CHTF8P0CG12 524 aa5.8□□□□□ -1.48
HDAC9-211ENST00000430454 PCP4P48539 62 aa5.8□□□□□ -1.48
HDAC9-211ENST00000430454 ORMDL3Q8N138 153 aa5.8□□□□□ -1.48
HDAC9-211ENST00000430454 STPG4Q8N801 248 aa5.8□□□□□ -1.48
HDAC9-211ENST00000430454 C2orf48Q96LS8 159 aa5.8□□□□□ -1.48
HDAC9-211ENST00000430454 SMIM2Q9BVW6 85 aa5.8□□□□□ -1.48
HDAC9-211ENST00000430454 IGLV4-69A0A075B6H9 119 aa5.79□□□□□ -1.48
HDAC9-211ENST00000430454 LOC107984640A0A0U1RRK4 108 aa5.79□□□□□ -1.48
HDAC9-211ENST00000430454 IFI27P40305 119 aaPredicted RBP5.79□□□□□ -1.48
HDAC9-211ENST00000430454 SRSF3P84103 164 aaKnown RBP5.79□□□□□ -1.48
HDAC9-211ENST00000430454 PRSS3P2Q8NHM4 247 aa5.79□□□□□ -1.48
HDAC9-211ENST00000430454 CAMK2N2Q96S95 79 aa5.79□□□□□ -1.48
HDAC9-211ENST00000430454 LAMTOR2Q9Y2Q5 125 aa5.79□□□□□ -1.48
HDAC9-211ENST00000430454 A0A1B0GXF2 115 aa5.78□□□□□ -1.48
HDAC9-211ENST00000430454 G0S2P27469 103 aa5.78□□□□□ -1.48
HDAC9-211ENST00000430454 MRPS36P82909 103 aaKnown RBP5.78□□□□□ -1.48
HDAC9-211ENST00000430454 TMEM136Q6ZRR5 245 aa5.78□□□□□ -1.48
HDAC9-211ENST00000430454 OR10D4PQ8NGN7 298 aa5.78□□□□□ -1.48
HDAC9-211ENST00000430454 PRELID3AQ96N28 172 aa5.78□□□□□ -1.48
HDAC9-211ENST00000430454 A0A096LNI7 61 aa5.77□□□□□ -1.49
HDAC9-211ENST00000430454 TGIF2-C20orf24A0A0A6YYL0 155 aa5.77□□□□□ -1.49
HDAC9-211ENST00000430454 IFITM10A6NMD0 228 aa5.77□□□□□ -1.49
HDAC9-211ENST00000430454 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
HDAC9-211ENST00000430454 PKHD1L1Q86WI1 4243 aa5.77□□□□□ -1.49
HDAC9-211ENST00000430454 FAT3Q8TDW7 4589 aa5.77□□□□□ -1.49
HDAC9-211ENST00000430454 K7EMI3 77 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 NPYP01303 97 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 PTTG1IPP53801 180 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 SPAG11BQ08648 103 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 RNF151Q2KHN1 245 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 RNASE13Q5GAN3 156 aaKnown RBP5.76□□□□□ -1.49
HDAC9-211ENST00000430454 Q6ZN92 141 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 Q6ZUT4 128 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 C5orf38Q86SI9 138 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 IMMP2LQ96T52 175 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 C2orf88Q9BSF0 95 aa5.76□□□□□ -1.49
HDAC9-211ENST00000430454 NDUFA1O15239 70 aa5.75□□□□□ -1.49
HDAC9-211ENST00000430454 GAGE2BQ13066 116 aa5.75□□□□□ -1.49
HDAC9-211ENST00000430454 PAPPA-AS1Q5QFB9 102 aa5.75□□□□□ -1.49
HDAC9-211ENST00000430454 REG3GQ6UW15 175 aa5.75□□□□□ -1.49
HDAC9-211ENST00000430454 Q6ZRP5 223 aa5.75□□□□□ -1.49
HDAC9-211ENST00000430454 ORAOV1Q8WV07 137 aa5.75□□□□□ -1.49
HDAC9-211ENST00000430454 LINC00526Q96FQ7 95 aa5.75□□□□□ -1.49
HDAC9-211ENST00000430454 PYGO1Q9Y3Y4 419 aa5.75□□□□□ -1.49
HDAC9-211ENST00000430454 NPSP0C0P6 89 aa5.74□□□□□ -1.49
HDAC9-211ENST00000430454 SMCPP49901 116 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-211ENST00000430454 RPL39P62891 51 aaKnown RBP5.74□□□□□ -1.49
HDAC9-211ENST00000430454 PRR3P79522 188 aaKnown RBP5.74□□□□□ -1.49
HDAC9-211ENST00000430454 RPL18AQ02543 176 aaKnown RBP5.74□□□□□ -1.49
HDAC9-211ENST00000430454 ORMDL2Q53FV1 153 aa5.74□□□□□ -1.49
HDAC9-211ENST00000430454 TEX43Q6ZNM6 134 aa5.74□□□□□ -1.49
HDAC9-211ENST00000430454 TMEM141Q96I45 108 aa5.74□□□□□ -1.49
HDAC9-211ENST00000430454 MRPL35Q9NZE8 188 aaKnown RBP5.74□□□□□ -1.49
HDAC9-211ENST00000430454 PLA2G2DQ9UNK4 145 aa5.74□□□□□ -1.49
HDAC9-211ENST00000430454 CYSLTR1Q9Y271 337 aa5.74□□□□□ -1.49
HDAC9-211ENST00000430454 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
HDAC9-211ENST00000430454 HMCN2Q8NDA2 5059 aa5.73□□□□□ -1.49
HDAC9-211ENST00000430454 LOC389332A0A1B0GUA5 103 aa5.73□□□□□ -1.49
HDAC9-211ENST00000430454 HNRNPA3P51991 378 aaKnown RBP5.73□□□□□ -1.49
HDAC9-211ENST00000430454 UQCC3Q6UW78 93 aa5.73□□□□□ -1.49
HDAC9-211ENST00000430454 SPINK6Q6UWN8 80 aa5.73□□□□□ -1.49
HDAC9-211ENST00000430454 Q8N8P6 123 aa5.73□□□□□ -1.49
HDAC9-211ENST00000430454 NXT2Q9NPJ8 142 aaKnown RBP5.73□□□□□ -1.49
HDAC9-211ENST00000430454 IGHV3OR16-9A0A0B4J2B5 98 aa5.72□□□□□ -1.49
HDAC9-211ENST00000430454 SEC11AP67812 179 aa5.72□□□□□ -1.49
HDAC9-211ENST00000430454 CLLU1Q5K131 121 aa5.72□□□□□ -1.49
HDAC9-211ENST00000430454 LINC01561Q8N1V8 128 aa5.72□□□□□ -1.49
HDAC9-211ENST00000430454 TRAV9-1A0A075B6T8 112 aa5.71□□□□□ -1.5
HDAC9-211ENST00000430454 A0A087WZ39 114 aa5.71□□□□□ -1.5
HDAC9-211ENST00000430454 LINC01549A6NIU2 74 aa5.71□□□□□ -1.5
HDAC9-211ENST00000430454 MT-ND6P03923 174 aa5.71□□□□□ -1.5
HDAC9-211ENST00000430454 PRSS2P07478 247 aa5.71□□□□□ -1.5
HDAC9-211ENST00000430454 S100PP25815 95 aa5.71□□□□□ -1.5
HDAC9-211ENST00000430454 PACRGQ96M98 296 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-211ENST00000430454 ALKBH7Q9BT30 221 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-211ENST00000430454 IGLV4-3A0A075B6K6 122 aa5.7□□□□□ -1.5
HDAC9-211ENST00000430454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-211ENST00000430454 C2orf66Q6UXQ4 117 aa5.7□□□□□ -1.5
HDAC9-211ENST00000430454 OPRPNQ99935 248 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-211ENST00000430454 TRBV30A0A0K0K1B3 111 aa5.69□□□□□ -1.5
HDAC9-211ENST00000430454 TLX1NBP0CAT3 122 aa5.69□□□□□ -1.5
HDAC9-211ENST00000430454 CKS1BP61024 79 aa5.69□□□□□ -1.5
HDAC9-211ENST00000430454 COX19Q49B96 90 aa5.69□□□□□ -1.5
HDAC9-211ENST00000430454 C9orf116Q5BN46 136 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-211ENST00000430454 LINC00242Q5T6M2 205 aa5.69□□□□□ -1.5
HDAC9-211ENST00000430454 LINC01600Q96MT4 127 aa5.69□□□□□ -1.5
HDAC9-211ENST00000430454 TMEM218A2RU14 115 aa5.68□□□□□ -1.5
HDAC9-211ENST00000430454 UBE2D1P51668 147 aa5.68□□□□□ -1.5
HDAC9-211ENST00000430454 HERVK_113P63121 156 aa5.68□□□□□ -1.5
HDAC9-211ENST00000430454 LBHQ53QV2 105 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-211ENST00000430454 FAM104AQ969W3 186 aa5.68□□□□□ -1.5
HDAC9-211ENST00000430454 GEMIN7Q9H840 131 aaKnown RBP5.68□□□□□ -1.5
HDAC9-211ENST00000430454 A0A0J9YXV3 536 aa5.67□□□□□ -1.5
HDAC9-211ENST00000430454 A0A1W2PNN7 141 aa5.67□□□□□ -1.5
HDAC9-211ENST00000430454 C6orf226Q5I0X4 101 aa5.67□□□□□ -1.5
HDAC9-211ENST00000430454 UNQ6190/PRO20217Q6UXQ8 127 aa5.67□□□□□ -1.5
HDAC9-211ENST00000430454 TIMM17AQ99595 171 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms