RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 S100A8P05109 93 aa9.14□□□□□ -0.95
MSH5-208ENST00000429846 IMMP2LQ96T52 175 aa9.14□□□□□ -0.95
MSH5-208ENST00000429846 SMIM2Q9BVW6 85 aa9.14□□□□□ -0.95
MSH5-208ENST00000429846 IGHV3OR16-9A0A0B4J2B5 98 aa9.13□□□□□ -0.95
MSH5-208ENST00000429846 NDUFA1O15239 70 aa9.13□□□□□ -0.95
MSH5-208ENST00000429846 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
MSH5-208ENST00000429846 RPL39P62891 51 aaKnown RBP9.13□□□□□ -0.95
MSH5-208ENST00000429846 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
MSH5-208ENST00000429846 ORAOV1Q8WV07 137 aa9.13□□□□□ -0.95
MSH5-208ENST00000429846 OPRPNQ99935 248 aaPredicted RBP9.13□□□□□ -0.95
MSH5-208ENST00000429846 F8W036 122 aa9.12□□□□□ -0.95
MSH5-208ENST00000429846 HBBP68871 147 aa9.12□□□□□ -0.95
MSH5-208ENST00000429846 C1orf137Q5JT78 98 aa9.12□□□□□ -0.95
MSH5-208ENST00000429846 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
MSH5-208ENST00000429846 D6R8Y8 96 aa9.11□□□□□ -0.95
MSH5-208ENST00000429846 PPBPP02775 128 aa9.11□□□□□ -0.95
MSH5-208ENST00000429846 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
MSH5-208ENST00000429846 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
MSH5-208ENST00000429846 TGIF2-C20orf24A0A0A6YYL0 155 aa9.1□□□□□ -0.95
MSH5-208ENST00000429846 IFITM10A6NMD0 228 aa9.1□□□□□ -0.95
MSH5-208ENST00000429846 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
MSH5-208ENST00000429846 SMDT1Q9H4I9 107 aa9.1□□□□□ -0.95
MSH5-208ENST00000429846 A0A1B0GXF2 115 aa9.09□□□□□ -0.95
MSH5-208ENST00000429846 IGLV7-43P04211 117 aa9.09□□□□□ -0.95
MSH5-208ENST00000429846 PEA15Q15121 130 aa9.09□□□□□ -0.95
MSH5-208ENST00000429846 NPYP01303 97 aa9.08□□□□□ -0.96
MSH5-208ENST00000429846 IFI27P40305 119 aaPredicted RBP9.08□□□□□ -0.96
MSH5-208ENST00000429846 MRPL54Q6P161 138 aaKnown RBP9.08□□□□□ -0.96
MSH5-208ENST00000429846 A0A087WZ39 114 aa9.07□□□□□ -0.96
MSH5-208ENST00000429846 C9JQL5 133 aa9.07□□□□□ -0.96
MSH5-208ENST00000429846 RAB5AP20339 215 aa9.07□□□□□ -0.96
MSH5-208ENST00000429846 UNQ6190/PRO20217Q6UXQ8 127 aa9.07□□□□□ -0.96
MSH5-208ENST00000429846 ORMDL3Q8N138 153 aa9.07□□□□□ -0.96
MSH5-208ENST00000429846 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
MSH5-208ENST00000429846 PYGO1Q9Y3Y4 419 aa9.07□□□□□ -0.96
MSH5-208ENST00000429846 C10orf25Q5T742 122 aa9.06□□□□□ -0.96
MSH5-208ENST00000429846 ATP5L2Q7Z4Y8 100 aa9.06□□□□□ -0.96
MSH5-208ENST00000429846 TRBV30A0A0K0K1B3 111 aa9.05□□□□□ -0.96
MSH5-208ENST00000429846 H0Y9J4 135 aa9.05□□□□□ -0.96
MSH5-208ENST00000429846 FAM19A5Q7Z5A7 132 aaPredicted RBP9.05□□□□□ -0.96
MSH5-208ENST00000429846 FAM168BA1KXE4 195 aa9.04□□□□□ -0.96
MSH5-208ENST00000429846 SRSF3P84103 164 aaKnown RBP9.04□□□□□ -0.96
MSH5-208ENST00000429846 GAGE2EQ4V326 116 aa9.04□□□□□ -0.96
MSH5-208ENST00000429846 LINC00242Q5T6M2 205 aa9.04□□□□□ -0.96
MSH5-208ENST00000429846 TMEM141Q96I45 108 aa9.04□□□□□ -0.96
MSH5-208ENST00000429846 GAGE2DQ9UEU5 116 aa9.04□□□□□ -0.96
MSH5-208ENST00000429846 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
MSH5-208ENST00000429846 IGLV1-50A0A075B6I6 118 aa9.03□□□□□ -0.96
MSH5-208ENST00000429846 IGLV4-3A0A075B6K6 122 aa9.03□□□□□ -0.96
MSH5-208ENST00000429846 KIAA0087Q14695 138 aa9.03□□□□□ -0.96
MSH5-208ENST00000429846 TMEM136Q6ZRR5 245 aa9.03□□□□□ -0.96
MSH5-208ENST00000429846 LINC01561Q8N1V8 128 aa9.03□□□□□ -0.96
MSH5-208ENST00000429846 PRELID3AQ96N28 172 aa9.03□□□□□ -0.96
MSH5-208ENST00000429846 PRSS47A8MTI9 375 aa9.02□□□□□ -0.97
MSH5-208ENST00000429846 M0QXV9 152 aa9.02□□□□□ -0.97
MSH5-208ENST00000429846 UBE2BP63146 152 aa9.02□□□□□ -0.97
MSH5-208ENST00000429846 TEX43Q6ZNM6 134 aa9.02□□□□□ -0.97
MSH5-208ENST00000429846 PRR26Q8N8Z3 221 aa9.02□□□□□ -0.97
MSH5-208ENST00000429846 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.97
MSH5-208ENST00000429846 NDUFC2-KCTD14E9PQ53 114 aa9.01□□□□□ -0.97
MSH5-208ENST00000429846 KRTAP11-1Q8IUC1 163 aa9.01□□□□□ -0.97
MSH5-208ENST00000429846 C2orf88Q9BSF0 95 aa9.01□□□□□ -0.97
MSH5-208ENST00000429846 Q6ZN92 141 aa9□□□□□ -0.97
MSH5-208ENST00000429846 MAP1LC3AQ9H492 121 aa9□□□□□ -0.97
MSH5-208ENST00000429846 NPSP0C0P6 89 aa8.99□□□□□ -0.97
MSH5-208ENST00000429846 UBE2D1P51668 147 aa8.99□□□□□ -0.97
MSH5-208ENST00000429846 C2orf82Q6UX34 121 aa8.99□□□□□ -0.97
MSH5-208ENST00000429846 KRTAP7-1Q8IUC3 87 aa8.99□□□□□ -0.97
MSH5-208ENST00000429846 CYSLTR1Q9Y271 337 aa8.99□□□□□ -0.97
MSH5-208ENST00000429846 KRTAP1-4P0C5Y4 121 aa8.98□□□□□ -0.97
MSH5-208ENST00000429846 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
MSH5-208ENST00000429846 C2orf66Q6UXQ4 117 aa8.98□□□□□ -0.97
MSH5-208ENST00000429846 K7EMI3 77 aa8.97□□□□□ -0.97
MSH5-208ENST00000429846 PRSS2P07478 247 aa8.97□□□□□ -0.97
MSH5-208ENST00000429846 ORMDL2Q53FV1 153 aa8.97□□□□□ -0.97
MSH5-208ENST00000429846 C9orf129Q5T035 196 aaKnown RBP8.97□□□□□ -0.97
MSH5-208ENST00000429846 Q8N8P6 123 aa8.97□□□□□ -0.97
MSH5-208ENST00000429846 AMELXQ99217 191 aa8.97□□□□□ -0.97
MSH5-208ENST00000429846 PNRC1Q12796 327 aaPredicted RBP8.96□□□□□ -0.98
MSH5-208ENST00000429846 FAM19A3Q7Z5A8 133 aa8.96□□□□□ -0.98
MSH5-208ENST00000429846 VCX2Q9H322 139 aa8.96□□□□□ -0.98
MSH5-208ENST00000429846 LOC389332A0A1B0GUA5 103 aa8.95□□□□□ -0.98
MSH5-208ENST00000429846 CKS1BP61024 79 aa8.95□□□□□ -0.98
MSH5-208ENST00000429846 SEC11AP67812 179 aa8.95□□□□□ -0.98
MSH5-208ENST00000429846 LINC00173Q6ZV60 143 aa8.95□□□□□ -0.98
MSH5-208ENST00000429846 Q8IZM0 81 aa8.95□□□□□ -0.98
MSH5-208ENST00000429846 ANAPC16Q96DE5 110 aa8.95□□□□□ -0.98
MSH5-208ENST00000429846 PAPPA-AS1Q5QFB9 102 aa8.94□□□□□ -0.98
MSH5-208ENST00000429846 TOMM7Q9P0U1 55 aa8.94□□□□□ -0.98
MSH5-208ENST00000429846 CARHSP1Q9Y2V2 147 aaKnown RBP8.94□□□□□ -0.98
MSH5-208ENST00000429846 A0A1B0GVG6 124 aa8.93□□□□□ -0.98
MSH5-208ENST00000429846 NUPR1O60356 82 aa8.93□□□□□ -0.98
MSH5-208ENST00000429846 HERVK_113P63121 156 aa8.93□□□□□ -0.98
MSH5-208ENST00000429846 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
MSH5-208ENST00000429846 NXT2Q9NPJ8 142 aaKnown RBP8.93□□□□□ -0.98
MSH5-208ENST00000429846 IGIPA6NJ69 53 aa8.92□□□□□ -0.98
MSH5-208ENST00000429846 ZNF861PO60384 105 aa8.92□□□□□ -0.98
MSH5-208ENST00000429846 MT-ND4LP03901 98 aa8.92□□□□□ -0.98
MSH5-208ENST00000429846 G0S2P27469 103 aa8.92□□□□□ -0.98
MSH5-208ENST00000429846 CXCL5P42830 114 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms