RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 KIF25-AS1Q9Y6Z4 181 aa4.19□□□□□ -1.74
PTPRK-211ENST00000429595 TMSB15BA0A087X1C1 80 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 LOC389332A0A1B0GUA5 103 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 A8MTW9 85 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.18□□□□□ -1.74
PTPRK-211ENST00000429595 H7C1H1 209 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 ZNF207O43670 478 aaKnown RBP4.18□□□□□ -1.74
PTPRK-211ENST00000429595 CDKN1BP46527 198 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 CRYBA4P53673 196 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 LINC00315P59091 139 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 FAM222AQ5U5X8 452 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 SPANXN1Q5VSR9 72 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 UFSP1Q6NVU6 142 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 ERASQ7Z444 233 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 TRPT1Q86TN4 253 aaKnown RBP4.18□□□□□ -1.74
PTPRK-211ENST00000429595 RNF182Q8N6D2 247 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 SMIM2Q9BVW6 85 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 RHPN1-AS1Q9BWJ2 59 aa4.18□□□□□ -1.74
PTPRK-211ENST00000429595 FAT1Q14517 4588 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 A0A087WTM6 91 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 MUC21A0A0G2JKD1 596 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 MUC21A0A140T8X8 626 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 SMIM9A6NGZ8 99 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 F8VRH5 84 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 VCYO14598 125 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 CIDEAO60543 219 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 DUSP14O95147 198 aaKnown RBP4.17□□□□□ -1.74
PTPRK-211ENST00000429595 POLR2KP53803 58 aaKnown RBP4.17□□□□□ -1.74
PTPRK-211ENST00000429595 VAMP3Q15836 100 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 MUC21Q5SSG8 566 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 OR5A1Q8NGJ0 315 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 DCANP1Q8TF63 244 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 TMEM141Q96I45 108 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 LINC00467Q9BRT7 94 aa4.17□□□□□ -1.74
PTPRK-211ENST00000429595 IGHV3OR16-12A0A075B7B8 117 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 TRBV27A0A0K0K1C4 114 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 A0A1B0GWB2 263 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 F5H768 121 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 GIG44P09565 113 aaPredicted RBP4.16□□□□□ -1.74
PTPRK-211ENST00000429595 SMIM13P0DJ93 91 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 RNASE3P12724 160 aaKnown RBP4.16□□□□□ -1.74
PTPRK-211ENST00000429595 CSNK1G2-AS1Q8NCQ2 148 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 OR4C5Q8NGB2 326 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 RASL10AQ92737 203 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 C9orf85Q96MD7 179 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 AP1S3Q96PC3 154 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 TIMM17AQ99595 171 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 PHLDA3Q9Y5J5 127 aa4.16□□□□□ -1.74
PTPRK-211ENST00000429595 TRBV25-1A0A075B6N4 114 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 IGHV3OR16-8A0A075B7F1 116 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 GAGE10A6NGK3 116 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 E9PLD3 99 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 SMKR1H3BMG3 65 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 K7EQG2 157 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 DNAH10OSP0CZ25 163 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 S100A4P26447 101 aaKnown RBP4.15□□□□□ -1.75
PTPRK-211ENST00000429595 PRR9Q5T870 116 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 LELP1Q5T871 98 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 AMMECR1LQ6DCA0 310 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 FAM159AQ6UWV7 190 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 XCL2Q9UBD3 114 aa4.15□□□□□ -1.75
PTPRK-211ENST00000429595 IGHV3-49A0A0A0MS15 119 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 A0A0J9YX75 114 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 IGIPA6NJ69 53 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 KNCNA6PVL3 124 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 K7EP34 96 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 K7ERU9 68 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 SNRPD3P62318 126 aaKnown RBP4.14□□□□□ -1.75
PTPRK-211ENST00000429595 RBX1P62877 108 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 RHOHQ15669 191 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 FOXI2Q6ZQN5 318 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 PCP2Q8IVA1 136 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 CEND1Q8N111 149 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 SCGB3A1Q96QR1 104 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 OPRPNQ99935 248 aaPredicted RBP4.14□□□□□ -1.75
PTPRK-211ENST00000429595 MRPL35Q9NZE8 188 aaKnown RBP4.14□□□□□ -1.75
PTPRK-211ENST00000429595 TP73-AS1Q9UF72 201 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
PTPRK-211ENST00000429595 CHTOPQ9Y3Y2 248 aaKnown RBP4.14□□□□□ -1.75
PTPRK-211ENST00000429595 TRAV8-6A0A0B4J262 113 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 IGHV3-16A0A0C4DH30 117 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 IGHV3-66A0A0C4DH42 116 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 A0A1W2PPM0 123 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 F8W1H4 67 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 H3BVH4 76 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 FABP2P12104 132 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 GATA1P15976 413 aaPredicted RBP4.13□□□□□ -1.75
PTPRK-211ENST00000429595 RNASE4P34096 147 aaKnown RBP4.13□□□□□ -1.75
PTPRK-211ENST00000429595 KRTAP12-2P59991 146 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 PMVKQ15126 192 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 OCIAD2Q56VL3 154 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 C2orf66Q6UXQ4 117 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 Q6ZRN7 208 aaPredicted RBP4.13□□□□□ -1.75
PTPRK-211ENST00000429595 NEGR1Q7Z3B1 354 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 KIR2DL4Q99706 377 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 CST9LQ9H4G1 147 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 SPANXB1Q9NS25 103 aaPredicted RBP4.13□□□□□ -1.75
PTPRK-211ENST00000429595 CYSLTR1Q9Y271 337 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 PYGO1Q9Y3Y4 419 aa4.13□□□□□ -1.75
PTPRK-211ENST00000429595 TRBV7-3A0A075B6L6 115 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms