RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 C3orf84H3BNL1 204 aa9.34□□□□□ -0.91
LDB3-205ENST00000429277 NUPR2A6NF83 97 aa9.34□□□□□ -0.92
LDB3-205ENST00000429277 SERP1Q9Y6X1 66 aa9.33□□□□□ -0.92
LDB3-205ENST00000429277 PTPN13Q12923 2485 aa9.33□□□□□ -0.92
LDB3-205ENST00000429277 PLAC8L1A1L4L8 177 aa9.33□□□□□ -0.92
LDB3-205ENST00000429277 DSCAML1Q8TD84 2053 aa9.32□□□□□ -0.92
LDB3-205ENST00000429277 NUP210LQ5VU65 1888 aa9.32□□□□□ -0.92
LDB3-205ENST00000429277 Q6JHZ5 121 aa9.32□□□□□ -0.92
LDB3-205ENST00000429277 RPL28P46779 137 aaKnown RBP9.31□□□□□ -0.92
LDB3-205ENST00000429277 LOC100131303A0A0U1RQF7 123 aa9.31□□□□□ -0.92
LDB3-205ENST00000429277 C2orf91Q6ZV80 131 aa9.31□□□□□ -0.92
LDB3-205ENST00000429277 IGLV2-18A0A075B6J9 118 aa9.31□□□□□ -0.92
LDB3-205ENST00000429277 IGHV4-30-4P0DP06 118 aa9.31□□□□□ -0.92
LDB3-205ENST00000429277 MPLKIPQ8TAP9 179 aa9.31□□□□□ -0.92
LDB3-205ENST00000429277 IGIPA6NJ69 53 aa9.3□□□□□ -0.92
LDB3-205ENST00000429277 SPINK6Q6UWN8 80 aa9.3□□□□□ -0.92
LDB3-205ENST00000429277 NAV2Q8IVL1 2488 aa9.3□□□□□ -0.92
LDB3-205ENST00000429277 CYSRT1A8MQ03 144 aa9.3□□□□□ -0.92
LDB3-205ENST00000429277 ARHGAP21Q5T5U3 1957 aa9.3□□□□□ -0.92
LDB3-205ENST00000429277 PPDPFQ9H3Y8 114 aa9.3□□□□□ -0.92
LDB3-205ENST00000429277 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
LDB3-205ENST00000429277 A8MZ25 164 aa9.3□□□□□ -0.92
LDB3-205ENST00000429277 WFDC13Q8IUB5 93 aa9.29□□□□□ -0.92
LDB3-205ENST00000429277 WFDC10AQ9H1F0 79 aa9.29□□□□□ -0.92
LDB3-205ENST00000429277 IGLV1-51P01701 117 aa9.29□□□□□ -0.92
LDB3-205ENST00000429277 ODF3L2Q3SX64 289 aa9.29□□□□□ -0.92
LDB3-205ENST00000429277 CSDC2Q9Y534 153 aaKnown RBP9.29□□□□□ -0.92
LDB3-205ENST00000429277 COX7CP15954 63 aa9.28□□□□□ -0.92
LDB3-205ENST00000429277 C18orf65Q6ZTR6 163 aa9.28□□□□□ -0.92
LDB3-205ENST00000429277 A0A0J9YWU9 116 aa9.28□□□□□ -0.92
LDB3-205ENST00000429277 LINC00242Q5T6M2 205 aa9.28□□□□□ -0.92
LDB3-205ENST00000429277 C10orf142B7Z368 130 aa9.28□□□□□ -0.92
LDB3-205ENST00000429277 LY6G6CO95867 125 aa9.28□□□□□ -0.92
LDB3-205ENST00000429277 PLA2G2AP14555 144 aa9.28□□□□□ -0.92
LDB3-205ENST00000429277 NTM-AS1Q6ZSK4 140 aa9.28□□□□□ -0.92
LDB3-205ENST00000429277 MYO18BQ8IUG5 2567 aa9.27□□□□□ -0.93
LDB3-205ENST00000429277 C16orf95Q9H693 158 aa9.27□□□□□ -0.93
LDB3-205ENST00000429277 Q6Q795 121 aa9.27□□□□□ -0.93
LDB3-205ENST00000429277 POM121L12Q8N7R1 296 aa9.27□□□□□ -0.93
LDB3-205ENST00000429277 NANOS2P60321 138 aaKnown RBP9.26□□□□□ -0.93
LDB3-205ENST00000429277 COL4A4P53420 1690 aaPredicted RBP9.26□□□□□ -0.93
LDB3-205ENST00000429277 Q6ZS46 218 aa9.26□□□□□ -0.93
LDB3-205ENST00000429277 COX8CQ7Z4L0 72 aa9.26□□□□□ -0.93
LDB3-205ENST00000429277 LINC00526Q96FQ7 95 aa9.26□□□□□ -0.93
LDB3-205ENST00000429277 RPL37AP8A6NKH3 93 aa9.26□□□□□ -0.93
LDB3-205ENST00000429277 M0R2N4 97 aa9.26□□□□□ -0.93
LDB3-205ENST00000429277 M0QXV9 152 aa9.25□□□□□ -0.93
LDB3-205ENST00000429277 SMIM1B2RUZ4 78 aa9.25□□□□□ -0.93
LDB3-205ENST00000429277 IGLV9-49A0A0B4J1Y8 123 aa9.24□□□□□ -0.93
LDB3-205ENST00000429277 LINC01561Q8N1V8 128 aa9.24□□□□□ -0.93
LDB3-205ENST00000429277 KIAA1549Q9HCM3 1950 aa9.24□□□□□ -0.93
LDB3-205ENST00000429277 PCDH15Q96QU1 1955 aa9.24□□□□□ -0.93
LDB3-205ENST00000429277 REG3GQ6UW15 175 aa9.23□□□□□ -0.93
LDB3-205ENST00000429277 HIVEP3Q5T1R4 2406 aa9.23□□□□□ -0.93
LDB3-205ENST00000429277 PLXNB1O43157 2135 aa9.22□□□□□ -0.93
LDB3-205ENST00000429277 AVPP01185 164 aa9.22□□□□□ -0.93
LDB3-205ENST00000429277 OXLD1Q5BKU9 147 aa9.22□□□□□ -0.93
LDB3-205ENST00000429277 Q8N814 137 aa9.22□□□□□ -0.93
LDB3-205ENST00000429277 TRAV7A0A075B6U4 112 aa9.22□□□□□ -0.93
LDB3-205ENST00000429277 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
LDB3-205ENST00000429277 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
LDB3-205ENST00000429277 A6NED7 52 aa9.22□□□□□ -0.93
LDB3-205ENST00000429277 C1orf137Q5JT78 98 aa9.22□□□□□ -0.93
LDB3-205ENST00000429277 BEAN1Q3B7T3 259 aa9.21□□□□□ -0.93
LDB3-205ENST00000429277 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.93
LDB3-205ENST00000429277 A0A1B0GUV1 79 aa9.21□□□□□ -0.94
LDB3-205ENST00000429277 SNURFQ9Y675 71 aa9.21□□□□□ -0.94
LDB3-205ENST00000429277 AMELXQ99217 191 aa9.2□□□□□ -0.94
LDB3-205ENST00000429277 MUC22E2RYF6 1773 aaPredicted RBP9.2□□□□□ -0.94
LDB3-205ENST00000429277 FHL2Q14192 279 aa9.19□□□□□ -0.94
LDB3-205ENST00000429277 TRBV10-3A0A0K0K1G6 114 aa9.19□□□□□ -0.94
LDB3-205ENST00000429277 GAS8-AS1O95177 125 aa9.19□□□□□ -0.94
LDB3-205ENST00000429277 PRYO14603 147 aa9.18□□□□□ -0.94
LDB3-205ENST00000429277 SMIM26A0A096LP01 95 aa9.18□□□□□ -0.94
LDB3-205ENST00000429277 PCNX3Q9H6A9 2034 aa9.17□□□□□ -0.94
LDB3-205ENST00000429277 HCFC1P51610 2035 aa9.17□□□□□ -0.94
LDB3-205ENST00000429277 PRM2P04554 102 aa9.17□□□□□ -0.94
LDB3-205ENST00000429277 PIEZO1Q92508 2521 aa9.17□□□□□ -0.94
LDB3-205ENST00000429277 CCDC168Q8NDH2 2452 aa9.17□□□□□ -0.94
LDB3-205ENST00000429277 C6orf223Q8N319 242 aa9.17□□□□□ -0.94
LDB3-205ENST00000429277 Q6ZVQ6 151 aa9.17□□□□□ -0.94
LDB3-205ENST00000429277 XGP55808 180 aa9.16□□□□□ -0.94
LDB3-205ENST00000429277 IGLV5-52A0A0A0MRZ9 124 aa9.16□□□□□ -0.94
LDB3-205ENST00000429277 CDSNQ15517 529 aa9.16□□□□□ -0.94
LDB3-205ENST00000429277 FAM30AQ9NZY2 134 aa9.16□□□□□ -0.94
LDB3-205ENST00000429277 CEP192Q8TEP8 1941 aa9.16□□□□□ -0.94
LDB3-205ENST00000429277 C2CD3Q4AC94 2353 aa9.15□□□□□ -0.94
LDB3-205ENST00000429277 ESRGQ1W209 222 aa9.14□□□□□ -0.95
LDB3-205ENST00000429277 IGLV4-60A0A075B6I1 120 aa9.14□□□□□ -0.95
LDB3-205ENST00000429277 Q6ZTC4 211 aa9.14□□□□□ -0.95
LDB3-205ENST00000429277 FSHBP01225 129 aa9.13□□□□□ -0.95
LDB3-205ENST00000429277 URB1-AS1Q96HZ7 61 aa9.13□□□□□ -0.95
LDB3-205ENST00000429277 NHLRC4P0CG21 123 aaPredicted RBP9.13□□□□□ -0.95
LDB3-205ENST00000429277 LRP4O75096 1905 aa9.12□□□□□ -0.95
LDB3-205ENST00000429277 LINC00208Q96KT6 92 aa9.12□□□□□ -0.95
LDB3-205ENST00000429277 COX6A2Q02221 97 aa9.12□□□□□ -0.95
LDB3-205ENST00000429277 Q8N2B8 174 aa9.12□□□□□ -0.95
LDB3-205ENST00000429277 LINC00310P59036 64 aa9.11□□□□□ -0.95
LDB3-205ENST00000429277 LINC00694P0DN24 101 aa9.11□□□□□ -0.95
LDB3-205ENST00000429277 CIRBP-AS1Q8TBR5 109 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms