RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 C10orf25Q5T742 122 aa9.52□□□□□ -0.89
SEC13-210ENST00000428626 MRPL54Q6P161 138 aaKnown RBP9.52□□□□□ -0.89
SEC13-210ENST00000428626 REG3GQ6UW15 175 aa9.52□□□□□ -0.89
SEC13-210ENST00000428626 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
SEC13-210ENST00000428626 TCAPO15273 167 aa9.51□□□□□ -0.89
SEC13-210ENST00000428626 RPL18AQ02543 176 aaKnown RBP9.51□□□□□ -0.89
SEC13-210ENST00000428626 SMAGPQ0VAQ4 97 aa9.51□□□□□ -0.89
SEC13-210ENST00000428626 KRTAP11-1Q8IUC1 163 aa9.51□□□□□ -0.89
SEC13-210ENST00000428626 ORAOV1Q8WV07 137 aa9.5□□□□□ -0.89
SEC13-210ENST00000428626 TMEM18Q96B42 140 aa9.5□□□□□ -0.89
SEC13-210ENST00000428626 A0A1B0GW15 77 aa9.49□□□□□ -0.89
SEC13-210ENST00000428626 FAM168BA1KXE4 195 aa9.49□□□□□ -0.89
SEC13-210ENST00000428626 HBBP68871 147 aa9.49□□□□□ -0.89
SEC13-210ENST00000428626 RNF151Q2KHN1 245 aa9.49□□□□□ -0.89
SEC13-210ENST00000428626 OR10D4PQ8NGN7 298 aa9.49□□□□□ -0.89
SEC13-210ENST00000428626 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
SEC13-210ENST00000428626 MRPS36P82909 103 aaKnown RBP9.48□□□□□ -0.89
SEC13-210ENST00000428626 UNQ6190/PRO20217Q6UXQ8 127 aa9.48□□□□□ -0.89
SEC13-210ENST00000428626 MRPL35Q9NZE8 188 aaKnown RBP9.48□□□□□ -0.89
SEC13-210ENST00000428626 PEA15Q15121 130 aa9.47□□□□□ -0.89
SEC13-210ENST00000428626 KRTAP7-1Q8IUC3 87 aa9.47□□□□□ -0.89
SEC13-210ENST00000428626 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
SEC13-210ENST00000428626 IFITM10A6NMD0 228 aa9.46□□□□□ -0.9
SEC13-210ENST00000428626 MT-ND6P03923 174 aa9.46□□□□□ -0.9
SEC13-210ENST00000428626 KIAA0087Q14695 138 aa9.46□□□□□ -0.9
SEC13-210ENST00000428626 C1orf137Q5JT78 98 aa9.46□□□□□ -0.9
SEC13-210ENST00000428626 LPAP08519 4548 aa9.45□□□□□ -0.9
SEC13-210ENST00000428626 F8W036 122 aa9.44□□□□□ -0.9
SEC13-210ENST00000428626 NDUFA1O15239 70 aa9.44□□□□□ -0.9
SEC13-210ENST00000428626 TLX1NBP0CAT3 122 aa9.44□□□□□ -0.9
SEC13-210ENST00000428626 LINC00242Q5T6M2 205 aa9.44□□□□□ -0.9
SEC13-210ENST00000428626 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
SEC13-210ENST00000428626 IGLV4-3A0A075B6K6 122 aa9.43□□□□□ -0.9
SEC13-210ENST00000428626 PPBPP02775 128 aa9.43□□□□□ -0.9
SEC13-210ENST00000428626 S100A8P05109 93 aa9.43□□□□□ -0.9
SEC13-210ENST00000428626 ZC2HC1BQ5TFG8 222 aa9.43□□□□□ -0.9
SEC13-210ENST00000428626 TMEM136Q6ZRR5 245 aa9.43□□□□□ -0.9
SEC13-210ENST00000428626 PRELID3AQ96N28 172 aa9.43□□□□□ -0.9
SEC13-210ENST00000428626 A0A087WZ39 114 aa9.42□□□□□ -0.9
SEC13-210ENST00000428626 F8WDY8 70 aa9.42□□□□□ -0.9
SEC13-210ENST00000428626 IGLV7-43P04211 117 aa9.42□□□□□ -0.9
SEC13-210ENST00000428626 ORMDL3Q8N138 153 aa9.42□□□□□ -0.9
SEC13-210ENST00000428626 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
SEC13-210ENST00000428626 PYGO1Q9Y3Y4 419 aa9.42□□□□□ -0.9
SEC13-210ENST00000428626 GAGE2EQ4V326 116 aa9.41□□□□□ -0.9
SEC13-210ENST00000428626 C2orf82Q6UX34 121 aa9.41□□□□□ -0.9
SEC13-210ENST00000428626 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
SEC13-210ENST00000428626 GAGE2DQ9UEU5 116 aa9.41□□□□□ -0.9
SEC13-210ENST00000428626 PRSS47A8MTI9 375 aa9.4□□□□□ -0.9
SEC13-210ENST00000428626 IFI27P40305 119 aaPredicted RBP9.4□□□□□ -0.9
SEC13-210ENST00000428626 LINC00173Q6ZV60 143 aa9.4□□□□□ -0.9
SEC13-210ENST00000428626 ATP5L2Q7Z4Y8 100 aa9.4□□□□□ -0.9
SEC13-210ENST00000428626 PRR26Q8N8Z3 221 aa9.4□□□□□ -0.9
SEC13-210ENST00000428626 TGIF2-C20orf24A0A0A6YYL0 155 aa9.39□□□□□ -0.91
SEC13-210ENST00000428626 LOC389332A0A1B0GUA5 103 aa9.39□□□□□ -0.91
SEC13-210ENST00000428626 RAB5AP20339 215 aa9.39□□□□□ -0.91
SEC13-210ENST00000428626 UBE2D1P51668 147 aa9.39□□□□□ -0.91
SEC13-210ENST00000428626 C9orf129Q5T035 196 aaKnown RBP9.38□□□□□ -0.91
SEC13-210ENST00000428626 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
SEC13-210ENST00000428626 H0Y9J4 135 aa9.37□□□□□ -0.91
SEC13-210ENST00000428626 KRTAP1-4P0C5Y4 121 aa9.37□□□□□ -0.91
SEC13-210ENST00000428626 C2orf66Q6UXQ4 117 aa9.36□□□□□ -0.91
SEC13-210ENST00000428626 DIRC1Q969H9 104 aa9.36□□□□□ -0.91
SEC13-210ENST00000428626 AMELXQ99217 191 aa9.36□□□□□ -0.91
SEC13-210ENST00000428626 TRBV30A0A0K0K1B3 111 aa9.35□□□□□ -0.91
SEC13-210ENST00000428626 M0QXV9 152 aa9.35□□□□□ -0.91
SEC13-210ENST00000428626 TEX43Q6ZNM6 134 aa9.35□□□□□ -0.91
SEC13-210ENST00000428626 Q8N8P6 123 aa9.35□□□□□ -0.91
SEC13-210ENST00000428626 NDUFC2-KCTD14E9PQ53 114 aa9.34□□□□□ -0.91
SEC13-210ENST00000428626 MAP1LC3AQ9H492 121 aa9.34□□□□□ -0.91
SEC13-210ENST00000428626 LAMTOR2Q9Y2Q5 125 aa9.34□□□□□ -0.91
SEC13-210ENST00000428626 IGIPA6NJ69 53 aa9.33□□□□□ -0.92
SEC13-210ENST00000428626 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
SEC13-210ENST00000428626 CYSLTR1Q9Y271 337 aa9.33□□□□□ -0.92
SEC13-210ENST00000428626 UBE2BP63146 152 aa9.31□□□□□ -0.92
SEC13-210ENST00000428626 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
SEC13-210ENST00000428626 LINC00469Q8N7U9 141 aa9.31□□□□□ -0.92
SEC13-210ENST00000428626 PACRGQ96M98 296 aaPredicted RBP9.31□□□□□ -0.92
SEC13-210ENST00000428626 VCX2Q9H322 139 aa9.31□□□□□ -0.92
SEC13-210ENST00000428626 PNRC1Q12796 327 aaPredicted RBP9.3□□□□□ -0.92
SEC13-210ENST00000428626 ANAPC16Q96DE5 110 aa9.3□□□□□ -0.92
SEC13-210ENST00000428626 C2orf88Q9BSF0 95 aa9.3□□□□□ -0.92
SEC13-210ENST00000428626 TOMM7Q9P0U1 55 aa9.3□□□□□ -0.92
SEC13-210ENST00000428626 MT-ND4LP03901 98 aa9.29□□□□□ -0.92
SEC13-210ENST00000428626 ORMDL2Q53FV1 153 aa9.29□□□□□ -0.92
SEC13-210ENST00000428626 Q6ZN92 141 aa9.29□□□□□ -0.92
SEC13-210ENST00000428626 CDKN2A-AS1Q9UH64 79 aa9.29□□□□□ -0.92
SEC13-210ENST00000428626 IGLV1-50A0A075B6I6 118 aa9.28□□□□□ -0.92
SEC13-210ENST00000428626 Q8IZM0 81 aa9.28□□□□□ -0.92
SEC13-210ENST00000428626 XAGE1AQ9HD64 81 aa9.28□□□□□ -0.92
SEC13-210ENST00000428626 NPSP0C0P6 89 aa9.27□□□□□ -0.93
SEC13-210ENST00000428626 KIAA1644Q3SXP7 199 aa9.27□□□□□ -0.93
SEC13-210ENST00000428626 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
SEC13-210ENST00000428626 C22orf24Q9Y442 160 aa9.27□□□□□ -0.93
SEC13-210ENST00000428626 PRSS2P07478 247 aa9.26□□□□□ -0.93
SEC13-210ENST00000428626 CKS1BP61024 79 aa9.26□□□□□ -0.93
SEC13-210ENST00000428626 ALKBH7Q9BT30 221 aaPredicted RBP9.26□□□□□ -0.93
SEC13-210ENST00000428626 NXT2Q9NPJ8 142 aaKnown RBP9.26□□□□□ -0.93
SEC13-210ENST00000428626 K7EMI3 77 aa9.25□□□□□ -0.93
SEC13-210ENST00000428626 TOMM6Q96B49 74 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 333.9 ms