RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 PYGO1Q9Y3Y4 419 aa12.12□□□□□ -0.47
HLCS-204ENST00000427746 PTTG1IPP53801 180 aa12.11□□□□□ -0.47
HLCS-204ENST00000427746 IFITM2Q01629 132 aa12.11□□□□□ -0.47
HLCS-204ENST00000427746 CAMK2N2Q96S95 79 aa12.11□□□□□ -0.47
HLCS-204ENST00000427746 LOC107984640A0A0U1RRK4 108 aa12.1□□□□□ -0.47
HLCS-204ENST00000427746 LOC389332A0A1B0GUA5 103 aa12.1□□□□□ -0.47
HLCS-204ENST00000427746 IFITM10A6NMD0 228 aa12.1□□□□□ -0.47
HLCS-204ENST00000427746 ADCYAP1P18509 176 aa12.1□□□□□ -0.47
HLCS-204ENST00000427746 IFI27P40305 119 aaPredicted RBP12.1□□□□□ -0.47
HLCS-204ENST00000427746 SPAG11BQ08648 103 aa12.1□□□□□ -0.47
HLCS-204ENST00000427746 OR10D4PQ8NGN7 298 aa12.1□□□□□ -0.47
HLCS-204ENST00000427746 MAP1LC3AQ9H492 121 aa12.1□□□□□ -0.47
HLCS-204ENST00000427746 IGLV4-3A0A075B6K6 122 aa12.09□□□□□ -0.47
HLCS-204ENST00000427746 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
HLCS-204ENST00000427746 UQCC3Q6UW78 93 aa12.09□□□□□ -0.47
HLCS-204ENST00000427746 Q8N8P6 123 aa12.09□□□□□ -0.47
HLCS-204ENST00000427746 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
HLCS-204ENST00000427746 TMEM218A2RU14 115 aa12.07□□□□□ -0.48
HLCS-204ENST00000427746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.07□□□□□ -0.48
HLCS-204ENST00000427746 MT1HL1P0DM35 61 aa12.07□□□□□ -0.48
HLCS-204ENST00000427746 GAGE2BQ13066 116 aa12.07□□□□□ -0.48
HLCS-204ENST00000427746 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
HLCS-204ENST00000427746 ORAOV1Q8WV07 137 aa12.07□□□□□ -0.48
HLCS-204ENST00000427746 HMCN2Q8NDA2 5059 aa12.07□□□□□ -0.48
HLCS-204ENST00000427746 SERTAD4-AS1Q5TG53 156 aa12.06□□□□□ -0.48
HLCS-204ENST00000427746 TMEM141Q96I45 108 aa12.06□□□□□ -0.48
HLCS-204ENST00000427746 F8WDY8 70 aa12.05□□□□□ -0.48
HLCS-204ENST00000427746 LINC00242Q5T6M2 205 aa12.05□□□□□ -0.48
HLCS-204ENST00000427746 A0A087WZ39 114 aa12.04□□□□□ -0.48
HLCS-204ENST00000427746 A0A0J9YXV3 536 aa12.04□□□□□ -0.48
HLCS-204ENST00000427746 K7EMI3 77 aa12.04□□□□□ -0.48
HLCS-204ENST00000427746 C2orf66Q6UXQ4 117 aa12.04□□□□□ -0.48
HLCS-204ENST00000427746 CTDSP1Q9GZU7 261 aa12.04□□□□□ -0.48
HLCS-204ENST00000427746 MRPL35Q9NZE8 188 aaKnown RBP12.04□□□□□ -0.48
HLCS-204ENST00000427746 CYSLTR1Q9Y271 337 aa12.04□□□□□ -0.48
HLCS-204ENST00000427746 TGIF2-C20orf24A0A0A6YYL0 155 aa12.03□□□□□ -0.48
HLCS-204ENST00000427746 A0A1W2PNN7 141 aa12.03□□□□□ -0.48
HLCS-204ENST00000427746 ORMDL2Q53FV1 153 aa12.03□□□□□ -0.48
HLCS-204ENST00000427746 UBE2D1P51668 147 aa12.02□□□□□ -0.49
HLCS-204ENST00000427746 C10orf25Q5T742 122 aa12.02□□□□□ -0.49
HLCS-204ENST00000427746 TEX43Q6ZNM6 134 aa12.02□□□□□ -0.49
HLCS-204ENST00000427746 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.49
HLCS-204ENST00000427746 AMELXQ99217 191 aa12.02□□□□□ -0.49
HLCS-204ENST00000427746 NXT2Q9NPJ8 142 aaKnown RBP12.02□□□□□ -0.49
HLCS-204ENST00000427746 TRAV9-1A0A075B6T8 112 aa12.01□□□□□ -0.49
HLCS-204ENST00000427746 IGIPA6NJ69 53 aa12.01□□□□□ -0.49
HLCS-204ENST00000427746 NDUFA1O15239 70 aa12.01□□□□□ -0.49
HLCS-204ENST00000427746 NPSP0C0P6 89 aa12.01□□□□□ -0.49
HLCS-204ENST00000427746 RPL18AQ02543 176 aaKnown RBP12.01□□□□□ -0.49
HLCS-204ENST00000427746 KIAA0087Q14695 138 aa12.01□□□□□ -0.49
HLCS-204ENST00000427746 SEC11CQ9BY50 192 aa12.01□□□□□ -0.49
HLCS-204ENST00000427746 ZC2HC1BQ5TFG8 222 aa12□□□□□ -0.49
HLCS-204ENST00000427746 UNQ6190/PRO20217Q6UXQ8 127 aa12□□□□□ -0.49
HLCS-204ENST00000427746 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
HLCS-204ENST00000427746 C9orf116Q5BN46 136 aaPredicted RBP11.99□□□□□ -0.49
HLCS-204ENST00000427746 Q6ZRP5 223 aa11.99□□□□□ -0.49
HLCS-204ENST00000427746 C2orf88Q9BSF0 95 aa11.99□□□□□ -0.49
HLCS-204ENST00000427746 C6orf48Q9UBA6 75 aa11.99□□□□□ -0.49
HLCS-204ENST00000427746 TLX1NBP0CAT3 122 aa11.98□□□□□ -0.49
HLCS-204ENST00000427746 Q6ZN92 141 aa11.98□□□□□ -0.49
HLCS-204ENST00000427746 LINC01561Q8N1V8 128 aa11.98□□□□□ -0.49
HLCS-204ENST00000427746 VCX2Q9H322 139 aa11.98□□□□□ -0.49
HLCS-204ENST00000427746 SRSF9Q13242 221 aaKnown RBP eCLIP11.97□□□□□ -0.49
HLCS-204ENST00000427746 FAM19A3Q7Z5A8 133 aa11.97□□□□□ -0.49
HLCS-204ENST00000427746 SPINK6Q6UWN8 80 aa11.96□□□□□ -0.49
HLCS-204ENST00000427746 TNXBP22105 4242 aa11.95□□□□□ -0.5
HLCS-204ENST00000427746 COMMD7Q86VX2 200 aa11.95□□□□□ -0.5
HLCS-204ENST00000427746 LINC01600Q96MT4 127 aa11.95□□□□□ -0.5
HLCS-204ENST00000427746 GNB1LQ9BYB4 327 aa11.95□□□□□ -0.5
HLCS-204ENST00000427746 S100PP25815 95 aa11.94□□□□□ -0.5
HLCS-204ENST00000427746 G0S2P27469 103 aa11.94□□□□□ -0.5
HLCS-204ENST00000427746 C10orf91Q5T1B1 145 aa11.94□□□□□ -0.5
HLCS-204ENST00000427746 TOMM6Q96B49 74 aa11.94□□□□□ -0.5
HLCS-204ENST00000427746 TIMM17AQ99595 171 aa11.94□□□□□ -0.5
HLCS-204ENST00000427746 C2orf82Q6UX34 121 aa11.93□□□□□ -0.5
HLCS-204ENST00000427746 PHF5AQ7RTV0 110 aaKnown RBP11.93□□□□□ -0.5
HLCS-204ENST00000427746 TRBV30A0A0K0K1B3 111 aa11.92□□□□□ -0.5
HLCS-204ENST00000427746 PAPPA-AS1Q5QFB9 102 aa11.92□□□□□ -0.5
HLCS-204ENST00000427746 ALKBH7Q9BT30 221 aaPredicted RBP11.92□□□□□ -0.5
HLCS-204ENST00000427746 PSORS1C2Q9UIG4 136 aa11.92□□□□□ -0.5
HLCS-204ENST00000427746 PLA2G2DQ9UNK4 145 aa11.92□□□□□ -0.5
HLCS-204ENST00000427746 FAM168BA1KXE4 195 aa11.91□□□□□ -0.5
HLCS-204ENST00000427746 LINC01546A6NGU7 62 aa11.91□□□□□ -0.5
HLCS-204ENST00000427746 CARHSP1Q9Y2V2 147 aaKnown RBP11.91□□□□□ -0.5
HLCS-204ENST00000427746 ERASQ7Z444 233 aa11.9□□□□□ -0.5
HLCS-204ENST00000427746 HERVK_113P63121 156 aa11.89□□□□□ -0.51
HLCS-204ENST00000427746 SEC11AP67812 179 aa11.89□□□□□ -0.51
HLCS-204ENST00000427746 COX19Q49B96 90 aa11.89□□□□□ -0.51
HLCS-204ENST00000427746 GAGE2EQ4V326 116 aa11.89□□□□□ -0.51
HLCS-204ENST00000427746 KRTAP7-1Q8IUC3 87 aa11.89□□□□□ -0.51
HLCS-204ENST00000427746 GAGE2DQ9UEU5 116 aa11.89□□□□□ -0.51
HLCS-204ENST00000427746 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
HLCS-204ENST00000427746 NDUFC2-KCTD14E9PQ53 114 aa11.88□□□□□ -0.51
HLCS-204ENST00000427746 MT-ND6P03923 174 aa11.88□□□□□ -0.51
HLCS-204ENST00000427746 RHEBQ15382 184 aa11.88□□□□□ -0.51
HLCS-204ENST00000427746 REG3GQ6UW15 175 aa11.88□□□□□ -0.51
HLCS-204ENST00000427746 Q8IZM0 81 aa11.88□□□□□ -0.51
HLCS-204ENST00000427746 PACRGQ96M98 296 aaPredicted RBP11.88□□□□□ -0.51
HLCS-204ENST00000427746 SCGB3A1Q96QR1 104 aa11.88□□□□□ -0.51
HLCS-204ENST00000427746 PRSS2P07478 247 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms