RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 IGHV1-69P01742 117 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 HBDP02042 147 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 APELAP0DMC3 54 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 IGHV3-30-3P0DP02 117 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 COX8AP10176 69 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 FGF6P10767 208 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 HLA-DRB4P13762 266 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 ZNF25P17030 456 aaPredicted RBP1□□□□□ -2.25
PTPRC-208ENST00000427110 CD24P25063 80 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 FCER1GP30273 86 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 ZNF80P51504 273 aaPredicted RBP1□□□□□ -2.25
PTPRC-208ENST00000427110 TSPEAR-AS2P59090 65 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 DAD1P61803 113 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 SEC11AP67812 179 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 RHOGP84095 191 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 SMAGPQ0VAQ4 97 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 HES1Q14469 280 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 Q56UQ5 140 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 SAMD13Q5VXD3 122 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 LYZL1Q6UWQ5 148 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 SCGB1D4Q6XE38 83 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 Q6ZRU5 148 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 GPHB5Q86YW7 130 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 Q8N8P6 123 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 C10orf105Q8TEF2 133 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 USMG5Q96IX5 58 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 PRELID3AQ96N28 172 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 BPESC1Q9GZL8 116 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 AGPAT4-IT1Q9H0P7 198 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 NXT2Q9NPJ8 142 aaKnown RBP1□□□□□ -2.25
PTPRC-208ENST00000427110 HIGD1BQ9P298 99 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 SMPXQ9UHP9 88 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 PSORS1C2Q9UIG4 136 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 HILPDAQ9Y5L2 63 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 HLA-DRB4X5D2U9 266 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 NCOR2Q9Y618 2525 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 DOPEY1Q5JWR5 2465 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 ASH1LQ9NR48 2969 aaKnown RBP1□□□□□ -2.25
PTPRC-208ENST00000427110 DOPEY2Q9Y3R5 2298 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 SORL1Q92673 2214 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 ITPR1Q14643 2758 aa1□□□□□ -2.25
PTPRC-208ENST00000427110 AKAP9Q99996 3911 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 CELSR1Q9NYQ6 3014 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 CHD8Q9HCK8 2581 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 IGKV2-40A0A087WW87 121 aaPredicted RBP0.99□□□□□ -2.25
PTPRC-208ENST00000427110 A0A096LNT2 108 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 TRAV12-1A0A0B4J245 112 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 TRAV41A0A0B4J266 112 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 TRAV21A0A0B4J279 112 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 A8MTW9 85 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 B4DSR2 109 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 G3V318 75 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 C19orf84I3L1E1 186 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 K7EP13 123 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 TAX1BP3O14907 124 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 PPP1R17O96001 155 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 NPYP01303 97 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 IGKV2D-40P01614 121 aaPredicted RBP0.99□□□□□ -2.25
PTPRC-208ENST00000427110 ORM1P02763 201 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 MSMBP08118 114 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 EVI2AP22794 236 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 HLA-DMBP28068 263 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 CKS2P33552 79 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 IFI27P40305 119 aaPredicted RBP0.99□□□□□ -2.25
PTPRC-208ENST00000427110 KRTAP12-1P59990 96 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 PRB3Q04118 309 aaPredicted RBP0.99□□□□□ -2.25
PTPRC-208ENST00000427110 BVES-AS1Q5T3Y7 98 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 TMEM78Q5T7P6 136 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 C2orf91Q6ZV80 131 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 OR4X2Q8NGF9 303 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 MYOZ3Q8TDC0 251 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 IFI27L1Q96BM0 104 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 DNAJC30Q96LL9 226 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 ODF3Q96PU9 254 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 C20orf78Q9BR46 151 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 MAP1LC3AQ9H492 121 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 HHLA3Q9XRX5 114 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 PKD1L2Q7Z442 2459 aa0.99□□□□□ -2.25
PTPRC-208ENST00000427110 ANK3Q12955 4377 aaKnown RBP0.99□□□□□ -2.25
PTPRC-208ENST00000427110 USP9XQ93008 2570 aaPredicted RBP0.99□□□□□ -2.25
PTPRC-208ENST00000427110 PIEZO1Q92508 2521 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 SVEP1Q4LDE5 3571 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 UTP20O75691 2785 aaKnown RBP0.98□□□□□ -2.25
PTPRC-208ENST00000427110 SPG11Q96JI7 2443 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 FLNCQ14315 2725 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 CFAP46Q8IYW2 2715 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 IGSF10Q6WRI0 2623 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 CELSR2Q9HCU4 2923 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 A0A087WX48 190 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 TMSB15BA0A087X1C1 80 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 TRAV2A0A0B4J234 112 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 MUC21A0A0G2JKD1 596 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 TRBV6-5A0A0K0K1A5 114 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 TRBV27A0A0K0K1C4 114 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 MUC21A0A140T8X8 626 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 C7orf71A4D174 169 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 F8VRH5 84 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 H3BPC8 53 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 H3BRM9 83 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 H3BUX3 64 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms