RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 H7C423 109 aa6.39□□□□□ -1.39
HDLBP-213ENST00000427007 CCL25O15444 150 aa6.39□□□□□ -1.39
HDLBP-213ENST00000427007 SMIM6P0DI80 62 aa6.39□□□□□ -1.39
HDLBP-213ENST00000427007 PMCHP20382 165 aa6.39□□□□□ -1.39
HDLBP-213ENST00000427007 OR5A1Q8NGJ0 315 aa6.39□□□□□ -1.39
HDLBP-213ENST00000427007 TMEM18Q96B42 140 aa6.39□□□□□ -1.39
HDLBP-213ENST00000427007 LINC01600Q96MT4 127 aa6.39□□□□□ -1.39
HDLBP-213ENST00000427007 C12orf57Q99622 126 aa6.39□□□□□ -1.39
HDLBP-213ENST00000427007 LINC00959A0A1B0GUT2 108 aa6.38□□□□□ -1.39
HDLBP-213ENST00000427007 A0A1B0GXF2 115 aa6.38□□□□□ -1.39
HDLBP-213ENST00000427007 I3L3M4 83 aa6.38□□□□□ -1.39
HDLBP-213ENST00000427007 GAS8-AS1O95177 125 aa6.38□□□□□ -1.39
HDLBP-213ENST00000427007 ZNF25P17030 456 aaPredicted RBP6.38□□□□□ -1.39
HDLBP-213ENST00000427007 TMEM101Q96IK0 257 aa6.38□□□□□ -1.39
HDLBP-213ENST00000427007 PACRGQ96M98 296 aaPredicted RBP6.38□□□□□ -1.39
HDLBP-213ENST00000427007 TNXBP22105 4242 aa6.38□□□□□ -1.39
HDLBP-213ENST00000427007 IFITM10A6NMD0 228 aa6.37□□□□□ -1.39
HDLBP-213ENST00000427007 LCE2AQ5TA79 106 aaPredicted RBP6.37□□□□□ -1.39
HDLBP-213ENST00000427007 CARD19Q96LW7 228 aa6.37□□□□□ -1.39
HDLBP-213ENST00000427007 HIST1H2BLQ99880 126 aa6.37□□□□□ -1.39
HDLBP-213ENST00000427007 IGHV1-58A0A0C4DH39 117 aa6.36□□□□□ -1.39
HDLBP-213ENST00000427007 TRBV6-5A0A0K0K1A5 114 aa6.36□□□□□ -1.39
HDLBP-213ENST00000427007 TSHBP01222 138 aa6.36□□□□□ -1.39
HDLBP-213ENST00000427007 ESDP10768 282 aa6.36□□□□□ -1.39
HDLBP-213ENST00000427007 MRAP2Q96G30 205 aa6.36□□□□□ -1.39
HDLBP-213ENST00000427007 ST20Q9HBF5 79 aa6.36□□□□□ -1.39
HDLBP-213ENST00000427007 LRP2P98164 4655 aa6.35□□□□□ -1.39
HDLBP-213ENST00000427007 A0A0J9YXV3 536 aa6.35□□□□□ -1.39
HDLBP-213ENST00000427007 ZNF561-AS1K7EIQ3 104 aa6.35□□□□□ -1.39
HDLBP-213ENST00000427007 SERF1AO75920 110 aa6.35□□□□□ -1.39
HDLBP-213ENST00000427007 SS18Q15532 418 aa6.35□□□□□ -1.39
HDLBP-213ENST00000427007 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
HDLBP-213ENST00000427007 ALKBH7Q9BT30 221 aaPredicted RBP6.35□□□□□ -1.39
HDLBP-213ENST00000427007 LINC00474Q9P2X8 69 aa6.35□□□□□ -1.39
HDLBP-213ENST00000427007 SYCNQ0VAF6 134 aa6.34□□□□□ -1.39
HDLBP-213ENST00000427007 REG3GQ6UW15 175 aa6.34□□□□□ -1.39
HDLBP-213ENST00000427007 CD164L2Q6UWJ8 174 aa6.34□□□□□ -1.39
HDLBP-213ENST00000427007 CDC42SE2Q9NRR3 84 aa6.34□□□□□ -1.39
HDLBP-213ENST00000427007 PKIGQ9Y2B9 76 aa6.34□□□□□ -1.39
HDLBP-213ENST00000427007 RNF213Q63HN8 5207 aa6.33□□□□□ -1.4
HDLBP-213ENST00000427007 IGLV4-69A0A075B6H9 119 aa6.33□□□□□ -1.4
HDLBP-213ENST00000427007 PCP4L1A6NKN8 68 aa6.33□□□□□ -1.4
HDLBP-213ENST00000427007 NUPR1O60356 82 aa6.33□□□□□ -1.4
HDLBP-213ENST00000427007 POLR2KP53803 58 aaKnown RBP6.33□□□□□ -1.4
HDLBP-213ENST00000427007 GAGE2BQ13066 116 aa6.33□□□□□ -1.4
HDLBP-213ENST00000427007 RNASE13Q5GAN3 156 aaKnown RBP6.33□□□□□ -1.4
HDLBP-213ENST00000427007 Q6ZRP5 223 aa6.33□□□□□ -1.4
HDLBP-213ENST00000427007 MRPL52Q86TS9 123 aaKnown RBP6.33□□□□□ -1.4
HDLBP-213ENST00000427007 AMN1Q8IY45 258 aa6.33□□□□□ -1.4
HDLBP-213ENST00000427007 ZNF664Q8N3J9 261 aa6.33□□□□□ -1.4
HDLBP-213ENST00000427007 C18orf32Q8TCD1 76 aa6.33□□□□□ -1.4
HDLBP-213ENST00000427007 SMKR1H3BMG3 65 aa6.32□□□□□ -1.4
HDLBP-213ENST00000427007 HSBP1O75506 76 aa6.32□□□□□ -1.4
HDLBP-213ENST00000427007 RAB4AP20338 218 aa6.32□□□□□ -1.4
HDLBP-213ENST00000427007 PTTG1IPP53801 180 aa6.32□□□□□ -1.4
HDLBP-213ENST00000427007 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
HDLBP-213ENST00000427007 SRSF9Q13242 221 aaKnown RBP eCLIP6.32□□□□□ -1.43e-10■■■■■ 32.5
HDLBP-213ENST00000427007 JOSD1Q15040 202 aaPredicted RBP6.32□□□□□ -1.4
HDLBP-213ENST00000427007 PYY3Q5JQD4 70 aa6.32□□□□□ -1.4
HDLBP-213ENST00000427007 TMEM191AQ9H0A3 160 aa6.32□□□□□ -1.4
HDLBP-213ENST00000427007 TRBV27A0A0K0K1C4 114 aa6.31□□□□□ -1.4
HDLBP-213ENST00000427007 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
HDLBP-213ENST00000427007 A0A1W2PNN7 141 aa6.31□□□□□ -1.4
HDLBP-213ENST00000427007 SCGB1D1O95968 90 aa6.31□□□□□ -1.4
HDLBP-213ENST00000427007 MALP21145 153 aa6.31□□□□□ -1.4
HDLBP-213ENST00000427007 FCER1GP30273 86 aa6.31□□□□□ -1.4
HDLBP-213ENST00000427007 S100A12P80511 92 aa6.31□□□□□ -1.4
HDLBP-213ENST00000427007 FAM104BQ5XKR9 115 aa6.31□□□□□ -1.4
HDLBP-213ENST00000427007 COX7A2LO14548 114 aa6.3□□□□□ -1.4
HDLBP-213ENST00000427007 CKS2P33552 79 aa6.3□□□□□ -1.4
HDLBP-213ENST00000427007 LINC00310P59036 64 aa6.3□□□□□ -1.4
HDLBP-213ENST00000427007 ORMDL3Q8N138 153 aa6.3□□□□□ -1.4
HDLBP-213ENST00000427007 CHCHD1Q96BP2 118 aaKnown RBP6.3□□□□□ -1.4
HDLBP-213ENST00000427007 CAMK2N2Q96S95 79 aa6.3□□□□□ -1.4
HDLBP-213ENST00000427007 UBE2D4Q9Y2X8 147 aa6.3□□□□□ -1.4
HDLBP-213ENST00000427007 TRAV13-1A0A0B4J241 112 aa6.29□□□□□ -1.4
HDLBP-213ENST00000427007 D6R8Y8 96 aa6.29□□□□□ -1.4
HDLBP-213ENST00000427007 VCYO14598 125 aa6.29□□□□□ -1.4
HDLBP-213ENST00000427007 LINC00614P0C842 121 aa6.29□□□□□ -1.4
HDLBP-213ENST00000427007 RPL18AQ02543 176 aaKnown RBP6.29□□□□□ -1.4
HDLBP-213ENST00000427007 MRPL51Q4U2R6 128 aaKnown RBP6.29□□□□□ -1.4
HDLBP-213ENST00000427007 FA2HQ7L5A8 372 aa6.29□□□□□ -1.4
HDLBP-213ENST00000427007 C5orf38Q86SI9 138 aa6.29□□□□□ -1.4
HDLBP-213ENST00000427007 FAM19A2Q8N3H0 131 aa6.29□□□□□ -1.4
HDLBP-213ENST00000427007 PRELID3AQ96N28 172 aa6.29□□□□□ -1.4
HDLBP-213ENST00000427007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.28□□□□□ -1.4
HDLBP-213ENST00000427007 APOMO95445 188 aa6.28□□□□□ -1.4
HDLBP-213ENST00000427007 PPBPP02775 128 aa6.28□□□□□ -1.4
HDLBP-213ENST00000427007 KRTDAPP60985 99 aa6.28□□□□□ -1.4
HDLBP-213ENST00000427007 SUMO2P61956 95 aaKnown RBP6.28□□□□□ -1.4
HDLBP-213ENST00000427007 C9orf116Q5BN46 136 aaPredicted RBP6.28□□□□□ -1.4
HDLBP-213ENST00000427007 Q6ZUT4 128 aa6.28□□□□□ -1.4
HDLBP-213ENST00000427007 NRACQ8N912 160 aa6.28□□□□□ -1.4
HDLBP-213ENST00000427007 OPRPNQ99935 248 aaPredicted RBP6.28□□□□□ -1.4
HDLBP-213ENST00000427007 PSORS1C2Q9UIG4 136 aa6.28□□□□□ -1.4
HDLBP-213ENST00000427007 LOC389332A0A1B0GUA5 103 aa6.27□□□□□ -1.41
HDLBP-213ENST00000427007 SPAG11BQ08648 103 aa6.27□□□□□ -1.41
HDLBP-213ENST00000427007 PHF5AQ7RTV0 110 aaKnown RBP6.27□□□□□ -1.41
HDLBP-213ENST00000427007 KIR2DL4Q99706 377 aa6.27□□□□□ -1.41
HDLBP-213ENST00000427007 LAMTOR2Q9Y2Q5 125 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms