RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PYGO1Q9Y3Y4 419 aa11.54□□□□□ -0.56
SMARCAL1-205ENST00000425815 STPG4Q8N801 248 aa11.53□□□□□ -0.56
SMARCAL1-205ENST00000425815 MAP1LC3AQ9H492 121 aa11.53□□□□□ -0.56
SMARCAL1-205ENST00000425815 IGLV4-3A0A075B6K6 122 aa11.52□□□□□ -0.57
SMARCAL1-205ENST00000425815 SEC11CQ9BY50 192 aa11.52□□□□□ -0.57
SMARCAL1-205ENST00000425815 CTDSP1Q9GZU7 261 aa11.52□□□□□ -0.57
SMARCAL1-205ENST00000425815 C2orf48Q96LS8 159 aa11.51□□□□□ -0.57
SMARCAL1-205ENST00000425815 IFITM10A6NMD0 228 aa11.5□□□□□ -0.57
SMARCAL1-205ENST00000425815 OXTP01178 125 aa11.5□□□□□ -0.57
SMARCAL1-205ENST00000425815 IFI27P40305 119 aaPredicted RBP11.5□□□□□ -0.57
SMARCAL1-205ENST00000425815 KIAA1644Q3SXP7 199 aa11.49□□□□□ -0.57
SMARCAL1-205ENST00000425815 C10orf91Q5T1B1 145 aa11.49□□□□□ -0.57
SMARCAL1-205ENST00000425815 LINC00242Q5T6M2 205 aa11.49□□□□□ -0.57
SMARCAL1-205ENST00000425815 COMMD7Q86VX2 200 aa11.49□□□□□ -0.57
SMARCAL1-205ENST00000425815 CAMK2N2Q96S95 79 aa11.49□□□□□ -0.57
SMARCAL1-205ENST00000425815 LINC00474Q9P2X8 69 aa11.49□□□□□ -0.57
SMARCAL1-205ENST00000425815 APOMO95445 188 aa11.48□□□□□ -0.57
SMARCAL1-205ENST00000425815 PTTG1IPP53801 180 aa11.48□□□□□ -0.57
SMARCAL1-205ENST00000425815 SPAG11BQ08648 103 aa11.48□□□□□ -0.57
SMARCAL1-205ENST00000425815 ZC2HC1BQ5TFG8 222 aa11.48□□□□□ -0.57
SMARCAL1-205ENST00000425815 C2orf66Q6UXQ4 117 aa11.48□□□□□ -0.57
SMARCAL1-205ENST00000425815 TMEM141Q96I45 108 aa11.48□□□□□ -0.57
SMARCAL1-205ENST00000425815 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-205ENST00000425815 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
SMARCAL1-205ENST00000425815 TRAV9-1A0A075B6T8 112 aa11.46□□□□□ -0.57
SMARCAL1-205ENST00000425815 A0A0J9YXV3 536 aa11.46□□□□□ -0.57
SMARCAL1-205ENST00000425815 LOC107984640A0A0U1RRK4 108 aa11.46□□□□□ -0.57
SMARCAL1-205ENST00000425815 IGIPA6NJ69 53 aa11.46□□□□□ -0.57
SMARCAL1-205ENST00000425815 GAGE2BQ13066 116 aa11.46□□□□□ -0.57
SMARCAL1-205ENST00000425815 LINC00173Q6ZV60 143 aa11.46□□□□□ -0.57
SMARCAL1-205ENST00000425815 ORAOV1Q8WV07 137 aa11.46□□□□□ -0.57
SMARCAL1-205ENST00000425815 AMELXQ99217 191 aa11.46□□□□□ -0.57
SMARCAL1-205ENST00000425815 CYSLTR1Q9Y271 337 aa11.46□□□□□ -0.57
SMARCAL1-205ENST00000425815 A0A1W2PNN7 141 aa11.45□□□□□ -0.58
SMARCAL1-205ENST00000425815 UBE2D1P51668 147 aa11.45□□□□□ -0.58
SMARCAL1-205ENST00000425815 KIAA0087Q14695 138 aa11.45□□□□□ -0.58
SMARCAL1-205ENST00000425815 ORMDL2Q53FV1 153 aa11.45□□□□□ -0.58
SMARCAL1-205ENST00000425815 C10orf25Q5T742 122 aa11.45□□□□□ -0.58
SMARCAL1-205ENST00000425815 C7orf33Q8WU49 177 aa11.45□□□□□ -0.58
SMARCAL1-205ENST00000425815 NXT2Q9NPJ8 142 aaKnown RBP11.45□□□□□ -0.58
SMARCAL1-205ENST00000425815 PKIGQ9Y2B9 76 aa11.45□□□□□ -0.58
SMARCAL1-205ENST00000425815 A0A087WZ39 114 aa11.44□□□□□ -0.58
SMARCAL1-205ENST00000425815 K7EMI3 77 aa11.44□□□□□ -0.58
SMARCAL1-205ENST00000425815 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
SMARCAL1-205ENST00000425815 TEX43Q6ZNM6 134 aa11.43□□□□□ -0.58
SMARCAL1-205ENST00000425815 GNB1LQ9BYB4 327 aa11.43□□□□□ -0.58
SMARCAL1-205ENST00000425815 MRPL35Q9NZE8 188 aaKnown RBP11.43□□□□□ -0.58
SMARCAL1-205ENST00000425815 CARHSP1Q9Y2V2 147 aaKnown RBP11.43□□□□□ -0.58
SMARCAL1-205ENST00000425815 PRR3P79522 188 aaKnown RBP11.42□□□□□ -0.58
SMARCAL1-205ENST00000425815 UNQ6190/PRO20217Q6UXQ8 127 aa11.42□□□□□ -0.58
SMARCAL1-205ENST00000425815 HMCN2Q8NDA2 5059 aa11.41□□□□□ -0.58
SMARCAL1-205ENST00000425815 TGIF2-C20orf24A0A0A6YYL0 155 aa11.41□□□□□ -0.58
SMARCAL1-205ENST00000425815 F8WDY8 70 aa11.41□□□□□ -0.58
SMARCAL1-205ENST00000425815 NPSP0C0P6 89 aa11.41□□□□□ -0.58
SMARCAL1-205ENST00000425815 ALKBH7Q9BT30 221 aaPredicted RBP11.41□□□□□ -0.58
SMARCAL1-205ENST00000425815 VCX2Q9H322 139 aa11.41□□□□□ -0.58
SMARCAL1-205ENST00000425815 MT1HL1P0DM35 61 aa11.4□□□□□ -0.58
SMARCAL1-205ENST00000425815 S100PP25815 95 aa11.4□□□□□ -0.58
SMARCAL1-205ENST00000425815 FAM19A3Q7Z5A8 133 aa11.4□□□□□ -0.58
SMARCAL1-205ENST00000425815 TOMM6Q96B49 74 aa11.4□□□□□ -0.58
SMARCAL1-205ENST00000425815 C6orf48Q9UBA6 75 aa11.4□□□□□ -0.58
SMARCAL1-205ENST00000425815 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
SMARCAL1-205ENST00000425815 C9orf116Q5BN46 136 aaPredicted RBP11.39□□□□□ -0.59
SMARCAL1-205ENST00000425815 LINC01561Q8N1V8 128 aa11.39□□□□□ -0.59
SMARCAL1-205ENST00000425815 NDUFA1O15239 70 aa11.38□□□□□ -0.59
SMARCAL1-205ENST00000425815 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
SMARCAL1-205ENST00000425815 RHEBQ15382 184 aa11.38□□□□□ -0.59
SMARCAL1-205ENST00000425815 Q6ZN92 141 aa11.38□□□□□ -0.59
SMARCAL1-205ENST00000425815 C2orf88Q9BSF0 95 aa11.38□□□□□ -0.59
SMARCAL1-205ENST00000425815 RPS10P5Q9NQ39 176 aa11.38□□□□□ -0.59
SMARCAL1-205ENST00000425815 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
SMARCAL1-205ENST00000425815 Q6ZRP5 223 aa11.37□□□□□ -0.59
SMARCAL1-205ENST00000425815 TIMM17AQ99595 171 aa11.37□□□□□ -0.59
SMARCAL1-205ENST00000425815 C2orf82Q6UX34 121 aa11.36□□□□□ -0.59
SMARCAL1-205ENST00000425815 MRPL18Q9H0U6 180 aaKnown RBP11.36□□□□□ -0.59
SMARCAL1-205ENST00000425815 G0S2P27469 103 aa11.35□□□□□ -0.59
SMARCAL1-205ENST00000425815 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMARCAL1-205ENST00000425815 COX19Q49B96 90 aa11.35□□□□□ -0.59
SMARCAL1-205ENST00000425815 TNXBP22105 4242 aa11.35□□□□□ -0.59
SMARCAL1-205ENST00000425815 FABP9Q0Z7S8 132 aa11.34□□□□□ -0.59
SMARCAL1-205ENST00000425815 ERASQ7Z444 233 aa11.34□□□□□ -0.59
SMARCAL1-205ENST00000425815 PHF5AQ7RTV0 110 aaKnown RBP11.33□□□□□ -0.6
SMARCAL1-205ENST00000425815 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
SMARCAL1-205ENST00000425815 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
SMARCAL1-205ENST00000425815 FAM168BA1KXE4 195 aa11.32□□□□□ -0.6
SMARCAL1-205ENST00000425815 MT-ND6P03923 174 aa11.32□□□□□ -0.6
SMARCAL1-205ENST00000425815 PAPPA-AS1Q5QFB9 102 aa11.32□□□□□ -0.6
SMARCAL1-205ENST00000425815 KRTAP7-1Q8IUC3 87 aa11.32□□□□□ -0.6
SMARCAL1-205ENST00000425815 TRBV30A0A0K0K1B3 111 aa11.31□□□□□ -0.6
SMARCAL1-205ENST00000425815 HERVK_113P63121 156 aa11.3□□□□□ -0.6
SMARCAL1-205ENST00000425815 GAGE2EQ4V326 116 aa11.3□□□□□ -0.6
SMARCAL1-205ENST00000425815 SERTAD4-AS1Q5TG53 156 aa11.3□□□□□ -0.6
SMARCAL1-205ENST00000425815 URB1-AS1Q96HZ7 61 aa11.3□□□□□ -0.6
SMARCAL1-205ENST00000425815 GAGE2DQ9UEU5 116 aa11.3□□□□□ -0.6
SMARCAL1-205ENST00000425815 APOC3P02656 99 aa11.29□□□□□ -0.6
SMARCAL1-205ENST00000425815 SEC11AP67812 179 aa11.29□□□□□ -0.6
SMARCAL1-205ENST00000425815 SPINK6Q6UWN8 80 aa11.29□□□□□ -0.6
SMARCAL1-205ENST00000425815 KRTAP11-1Q8IUC1 163 aa11.29□□□□□ -0.6
SMARCAL1-205ENST00000425815 PSORS1C2Q9UIG4 136 aa11.29□□□□□ -0.6
SMARCAL1-205ENST00000425815 Q8IZM0 81 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms