RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 NDUFA1O15239 70 aa4.28□□□□□ -1.72
HLA-DQA1-204ENST00000422863 TLX1NBP0CAT3 122 aa4.28□□□□□ -1.72
HLA-DQA1-204ENST00000422863 CENPWQ5EE01 88 aa4.28□□□□□ -1.72
HLA-DQA1-204ENST00000422863 LINC00337Q8N6G1 96 aa4.28□□□□□ -1.72
HLA-DQA1-204ENST00000422863 SFT2D1Q8WV19 159 aa4.28□□□□□ -1.72
HLA-DQA1-204ENST00000422863 MARVELD1Q9BSK0 173 aa4.28□□□□□ -1.72
HLA-DQA1-204ENST00000422863 SMDT1Q9H4I9 107 aa4.28□□□□□ -1.72
HLA-DQA1-204ENST00000422863 ASB16-AS1Q495Z4 193 aa4.27□□□□□ -1.73
HLA-DQA1-204ENST00000422863 MRPL52Q86TS9 123 aaKnown RBP4.27□□□□□ -1.73
HLA-DQA1-204ENST00000422863 C9orf62Q8N4C0 152 aa4.27□□□□□ -1.73
HLA-DQA1-204ENST00000422863 KCNRGQ8N5I3 272 aa4.27□□□□□ -1.73
HLA-DQA1-204ENST00000422863 LINC00469Q8N7U9 141 aa4.27□□□□□ -1.73
HLA-DQA1-204ENST00000422863 C22orf24Q9Y442 160 aa4.27□□□□□ -1.73
HLA-DQA1-204ENST00000422863 hCG_2014768A0A024R1R8 64 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 XKRY2A2RUG3 117 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 C7orf77A4D0Y5 90 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 UPK1BO75841 260 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 TMEM241Q24JQ0 296 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 Q6ZUT4 128 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 NUDT10Q8NFP7 164 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 OR10D4PQ8NGN7 298 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 FAM213BQ8TBF2 198 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 NUDT11Q96G61 164 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 ST20Q9HBF5 79 aa4.26□□□□□ -1.73
HLA-DQA1-204ENST00000422863 FXYD6-FXYD2A0A087WZ82 144 aa4.25□□□□□ -1.73
HLA-DQA1-204ENST00000422863 NUPR1O60356 82 aa4.25□□□□□ -1.73
HLA-DQA1-204ENST00000422863 CTRLP40313 264 aa4.25□□□□□ -1.73
HLA-DQA1-204ENST00000422863 RPL28P46779 137 aaKnown RBP4.25□□□□□ -1.73
HLA-DQA1-204ENST00000422863 POLR2KP53803 58 aaKnown RBP4.25□□□□□ -1.73
HLA-DQA1-204ENST00000422863 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
HLA-DQA1-204ENST00000422863 SMIM15Q7Z3B0 74 aa4.25□□□□□ -1.73
HLA-DQA1-204ENST00000422863 UBE2D4Q9Y2X8 147 aa4.25□□□□□ -1.73
HLA-DQA1-204ENST00000422863 TRBV6-5A0A0K0K1A5 114 aa4.24□□□□□ -1.73
HLA-DQA1-204ENST00000422863 SMKR1H3BMG3 65 aa4.24□□□□□ -1.73
HLA-DQA1-204ENST00000422863 GNG4P50150 75 aa4.24□□□□□ -1.73
HLA-DQA1-204ENST00000422863 CCL20P78556 96 aa4.24□□□□□ -1.73
HLA-DQA1-204ENST00000422863 MT1HP80294 61 aa4.24□□□□□ -1.73
HLA-DQA1-204ENST00000422863 KIAA0087Q14695 138 aa4.24□□□□□ -1.73
HLA-DQA1-204ENST00000422863 TEX261Q6UWH6 196 aa4.24□□□□□ -1.73
HLA-DQA1-204ENST00000422863 MBD3L1Q8WWY6 194 aa4.24□□□□□ -1.73
HLA-DQA1-204ENST00000422863 CYTL1Q9NRR1 136 aa4.24□□□□□ -1.73
HLA-DQA1-204ENST00000422863 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 RPL37AP8A6NKH3 93 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 NDUFC2-KCTD14E9PQ53 114 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 BCE1O60756 84 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 FCER1GP30273 86 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 RGS21Q2M5E4 152 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 KRTAP13-3Q3SY46 172 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 LINC00299Q6ZSB3 139 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 SLC7A5P1Q8MH63 180 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 CNFNQ9BYD5 112 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
HLA-DQA1-204ENST00000422863 TRBV20OR9-2A0A075B6H5 130 aa4.22□□□□□ -1.73
HLA-DQA1-204ENST00000422863 F8WDY8 70 aa4.22□□□□□ -1.73
HLA-DQA1-204ENST00000422863 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
HLA-DQA1-204ENST00000422863 CTAG1AP78358 180 aa4.22□□□□□ -1.73
HLA-DQA1-204ENST00000422863 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
HLA-DQA1-204ENST00000422863 LBHQ53QV2 105 aaPredicted RBP4.22□□□□□ -1.73
HLA-DQA1-204ENST00000422863 C3orf22Q8N5N4 141 aa4.22□□□□□ -1.73
HLA-DQA1-204ENST00000422863 GNG13Q9P2W3 67 aa4.22□□□□□ -1.73
HLA-DQA1-204ENST00000422863 TRBV30A0A0K0K1B3 111 aa4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 TRBV27A0A0K0K1C4 114 aa4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 GAGE10A6NGK3 116 aa4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 RPL39P62891 51 aaKnown RBP4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 S100ZQ8WXG8 99 aa4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 FAM104AQ969W3 186 aa4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 C11orf52Q96A22 123 aa4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 PACRGQ96M98 296 aaPredicted RBP4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 LINC00167Q96N53 147 aa4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 CSDC2Q9Y534 153 aaKnown RBP4.21□□□□□ -1.74
HLA-DQA1-204ENST00000422863 ZNF727A8MUV8 499 aa4.2□□□□□ -1.74
HLA-DQA1-204ENST00000422863 VCYO14598 125 aa4.2□□□□□ -1.74
HLA-DQA1-204ENST00000422863 CFC1BP0CG36 223 aa4.2□□□□□ -1.74
HLA-DQA1-204ENST00000422863 RAB4AP20338 218 aa4.2□□□□□ -1.74
HLA-DQA1-204ENST00000422863 FAM229BQ4G0N7 80 aa4.2□□□□□ -1.74
HLA-DQA1-204ENST00000422863 MRPL55Q7Z7F7 128 aaKnown RBP4.2□□□□□ -1.74
HLA-DQA1-204ENST00000422863 MED9Q9NWA0 146 aa4.2□□□□□ -1.74
HLA-DQA1-204ENST00000422863 LOC105371267A0A1B0GV96 52 aa4.19□□□□□ -1.74
HLA-DQA1-204ENST00000422863 K7EN84 100 aa4.19□□□□□ -1.74
HLA-DQA1-204ENST00000422863 ARPC5O15511 151 aa4.19□□□□□ -1.74
HLA-DQA1-204ENST00000422863 UBE2AP49459 152 aa4.19□□□□□ -1.74
HLA-DQA1-204ENST00000422863 SMAGPQ0VAQ4 97 aa4.19□□□□□ -1.74
HLA-DQA1-204ENST00000422863 SLC51BQ86UW2 128 aa4.19□□□□□ -1.74
HLA-DQA1-204ENST00000422863 AMN1Q8IY45 258 aa4.19□□□□□ -1.74
HLA-DQA1-204ENST00000422863 OCC1Q8TAD7 63 aa4.19□□□□□ -1.74
HLA-DQA1-204ENST00000422863 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
HLA-DQA1-204ENST00000422863 IFITM10A6NMD0 228 aa4.18□□□□□ -1.74
HLA-DQA1-204ENST00000422863 GATCO43716 136 aaKnown RBP4.18□□□□□ -1.74
HLA-DQA1-204ENST00000422863 GIPP09681 153 aaPredicted RBP4.18□□□□□ -1.74
HLA-DQA1-204ENST00000422863 FP248Q71RG6 208 aaPredicted RBP4.18□□□□□ -1.74
HLA-DQA1-204ENST00000422863 KRTAP13-1Q8IUC0 172 aa4.18□□□□□ -1.74
HLA-DQA1-204ENST00000422863 MANBALQ9NQG1 85 aa4.18□□□□□ -1.74
HLA-DQA1-204ENST00000422863 BIN3Q9NQY0 253 aa4.18□□□□□ -1.74
HLA-DQA1-204ENST00000422863 TOMM7Q9P0U1 55 aa4.18□□□□□ -1.74
HLA-DQA1-204ENST00000422863 TGIF2-C20orf24A0A0A6YYL0 155 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 SMLR1H3BR10 107 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 M0R2T5 61 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 SCO1O75880 301 aa4.17□□□□□ -1.74
HLA-DQA1-204ENST00000422863 SUMO2P61956 95 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms