RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 ZNF861PO60384 105 aa2.76□□□□□ -1.97
CDC42EP3-202ENST00000422687 IFNA7P01567 189 aa2.76□□□□□ -1.97
CDC42EP3-202ENST00000422687 LINC00299Q6ZSB3 139 aa2.76□□□□□ -1.97
CDC42EP3-202ENST00000422687 TCEAL7Q9BRU2 100 aa2.76□□□□□ -1.97
CDC42EP3-202ENST00000422687 MARVELD1Q9BSK0 173 aa2.76□□□□□ -1.97
CDC42EP3-202ENST00000422687 TMEM243Q9BU79 118 aa2.76□□□□□ -1.97
CDC42EP3-202ENST00000422687 CTXND1A0A1B0GTU2 59 aa2.75□□□□□ -1.97
CDC42EP3-202ENST00000422687 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
CDC42EP3-202ENST00000422687 INMT-MINDY4F8WBC2 141 aa2.75□□□□□ -1.97
CDC42EP3-202ENST00000422687 RAB4AP20338 218 aa2.75□□□□□ -1.97
CDC42EP3-202ENST00000422687 RAB5CP51148 216 aa2.75□□□□□ -1.97
CDC42EP3-202ENST00000422687 AP1S3Q96PC3 154 aa2.75□□□□□ -1.97
CDC42EP3-202ENST00000422687 PKIGQ9Y2B9 76 aa2.75□□□□□ -1.97
CDC42EP3-202ENST00000422687 SULT1A2P50226 295 aa2.74□□□□□ -1.97
CDC42EP3-202ENST00000422687 UBE2G2P60604 165 aa2.74□□□□□ -1.97
CDC42EP3-202ENST00000422687 UBE2G1P62253 170 aa2.74□□□□□ -1.97
CDC42EP3-202ENST00000422687 IFITM3Q01628 133 aa2.74□□□□□ -1.97
CDC42EP3-202ENST00000422687 SPANXN1Q5VSR9 72 aa2.74□□□□□ -1.97
CDC42EP3-202ENST00000422687 ENKURQ8TC29 256 aa2.74□□□□□ -1.97
CDC42EP3-202ENST00000422687 IGLV1-50A0A075B6I6 118 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 TRAV26-2A0A0B4J265 109 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 IGHV1-58A0A0C4DH39 117 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 MUC21A0A140T8X8 626 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 A0A1W2PNN7 141 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 SSNA1O43805 119 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 UPK1BO75841 260 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 S100A9P06702 114 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 IGLC6P0CF74 106 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 SMIM17P0DL12 118 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 AKR1C3P42330 323 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 NKX2-5P52952 324 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 RASL11AQ6T310 242 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 DIRC1Q969H9 104 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 CARD19Q96LW7 228 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 NIT2Q9NQR4 276 aa2.73□□□□□ -1.97
CDC42EP3-202ENST00000422687 MAP1LC3B2A6NCE7 125 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 H0Y9J4 135 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 UBE2L6O14933 153 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 NCR2O95944 276 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 IGLV7-43P04211 117 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 NTF3P20783 257 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 NMUP48645 174 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 CACNG7P62955 275 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 SYCNQ0VAF6 134 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 COTL1Q14019 142 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 RPL7L1Q6DKI1 246 aaKnown RBP2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 BAGE2Q86Y30 109 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 FER1L6-AS1Q8NA97 138 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 OR5A1Q8NGJ0 315 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 S100ZQ8WXG8 99 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 MAP1LC3BQ9GZQ8 125 aa2.72□□□□□ -1.97
CDC42EP3-202ENST00000422687 LOC107984640A0A0U1RRK4 108 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 LINC00959A0A1B0GUT2 108 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 C19orf71A6NCJ1 209 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 MT-ND6P03923 174 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 MGPP08493 103 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 FGF6P10767 208 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 ZNF25P17030 456 aaPredicted RBP2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 CXCL5P42830 114 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 MEF2BQ02080 365 aaPredicted RBP2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 Q5BKY6 102 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 C9orf116Q5BN46 136 aaPredicted RBP2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 C1orf137Q5JT78 98 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 KRTAP11-1Q8IUC1 163 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 NUP35Q8NFH5 326 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 STOML3Q8TAV4 291 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 ISOC2Q96AB3 205 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 LINC00526Q96FQ7 95 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 FAM210AQ96ND0 272 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 CNFNQ9BYD5 112 aa2.71□□□□□ -1.98
CDC42EP3-202ENST00000422687 IGLV4-69A0A075B6H9 119 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 BORCS7-ASMTA0A0B4J1R7 106 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 IGKV3OR2-268A0A0C4DH90 116 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 F2Z2F3 143 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 CCL25O15444 150 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 HSBP1O75506 76 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 APOMO95445 188 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 TRGC1P0CF51 173 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 ESDP10768 282 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 PMCHP20382 165 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 XCL1P47992 114 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 DEFA3P59666 94 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 RPS20P60866 119 aaKnown RBP2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 AKR1C8PQ5T2L2 129 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 PHF5AQ7RTV0 110 aaKnown RBP2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 C9orf62Q8N4C0 152 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 GATD1Q8NB37 220 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 MBD3L1Q8WWY6 194 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 CYTL1Q9NRR1 136 aa2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 CARHSP1Q9Y2V2 147 aaKnown RBP2.7□□□□□ -1.98
CDC42EP3-202ENST00000422687 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.69□□□□□ -1.98
CDC42EP3-202ENST00000422687 TRBV6-5A0A0K0K1A5 114 aa2.69□□□□□ -1.98
CDC42EP3-202ENST00000422687 IGKV2-29A2NJV5 120 aaPredicted RBP2.69□□□□□ -1.98
CDC42EP3-202ENST00000422687 BCL2P10415 239 aa2.69□□□□□ -1.98
CDC42EP3-202ENST00000422687 RPL35P42766 123 aaKnown RBP2.69□□□□□ -1.98
CDC42EP3-202ENST00000422687 HERVK_113P61574 105 aa2.69□□□□□ -1.98
CDC42EP3-202ENST00000422687 AMMECR1LQ6DCA0 310 aa2.69□□□□□ -1.98
CDC42EP3-202ENST00000422687 MRPL52Q86TS9 123 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms