RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 RNF151Q2KHN1 245 aa7.16□□□□□ -1.26
SQSTM1-203ENST00000422245 MRPL54Q6P161 138 aaKnown RBP7.16□□□□□ -1.26
SQSTM1-203ENST00000422245 A0A1B0GXF2 115 aa7.15□□□□□ -1.26
SQSTM1-203ENST00000422245 MRPS36P82909 103 aaKnown RBP7.15□□□□□ -1.26
SQSTM1-203ENST00000422245 SRSF3P84103 164 aaKnown RBP7.15□□□□□ -1.26
SQSTM1-203ENST00000422245 SRSF9Q13242 221 aaKnown RBP eCLIP7.15□□□□□ -1.26
SQSTM1-203ENST00000422245 A0A1W2PNN7 141 aa7.14□□□□□ -1.27
SQSTM1-203ENST00000422245 IFITM10A6NMD0 228 aa7.14□□□□□ -1.27
SQSTM1-203ENST00000422245 NPYP01303 97 aa7.14□□□□□ -1.27
SQSTM1-203ENST00000422245 C9orf116Q5BN46 136 aaPredicted RBP7.14□□□□□ -1.27
SQSTM1-203ENST00000422245 ATP5L2Q7Z4Y8 100 aa7.14□□□□□ -1.27
SQSTM1-203ENST00000422245 ORAOV1Q8WV07 137 aa7.14□□□□□ -1.27
SQSTM1-203ENST00000422245 MRPL35Q9NZE8 188 aaKnown RBP7.14□□□□□ -1.27
SQSTM1-203ENST00000422245 IGHV3OR16-9A0A0B4J2B5 98 aa7.13□□□□□ -1.27
SQSTM1-203ENST00000422245 NDUFA1O15239 70 aa7.13□□□□□ -1.27
SQSTM1-203ENST00000422245 MT-ND6P03923 174 aa7.13□□□□□ -1.27
SQSTM1-203ENST00000422245 ORMDL3Q8N138 153 aa7.13□□□□□ -1.27
SQSTM1-203ENST00000422245 FAM104AQ969W3 186 aa7.13□□□□□ -1.27
SQSTM1-203ENST00000422245 TGIF2-C20orf24A0A0A6YYL0 155 aa7.12□□□□□ -1.27
SQSTM1-203ENST00000422245 A0A1B0GVG6 124 aa7.12□□□□□ -1.27
SQSTM1-203ENST00000422245 RAB5AP20339 215 aa7.12□□□□□ -1.27
SQSTM1-203ENST00000422245 IFI27P40305 119 aaPredicted RBP7.12□□□□□ -1.27
SQSTM1-203ENST00000422245 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
SQSTM1-203ENST00000422245 IMMP2LQ96T52 175 aa7.12□□□□□ -1.27
SQSTM1-203ENST00000422245 OPRPNQ99935 248 aaPredicted RBP7.12□□□□□ -1.27
SQSTM1-203ENST00000422245 LRP2P98164 4655 aa7.12□□□□□ -1.27
SQSTM1-203ENST00000422245 PRELID3AQ96N28 172 aa7.11□□□□□ -1.27
SQSTM1-203ENST00000422245 PSORS1C2Q9UIG4 136 aa7.11□□□□□ -1.27
SQSTM1-203ENST00000422245 TLX1NBP0CAT3 122 aa7.1□□□□□ -1.27
SQSTM1-203ENST00000422245 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
SQSTM1-203ENST00000422245 LAMTOR2Q9Y2Q5 125 aa7.1□□□□□ -1.27
SQSTM1-203ENST00000422245 PYGO1Q9Y3Y4 419 aa7.1□□□□□ -1.27
SQSTM1-203ENST00000422245 A0A087WZ39 114 aa7.09□□□□□ -1.27
SQSTM1-203ENST00000422245 C1orf137Q5JT78 98 aa7.09□□□□□ -1.27
SQSTM1-203ENST00000422245 PHF5AQ7RTV0 110 aaKnown RBP7.09□□□□□ -1.27
SQSTM1-203ENST00000422245 IGLV4-3A0A075B6K6 122 aa7.08□□□□□ -1.28
SQSTM1-203ENST00000422245 PNRC1Q12796 327 aaPredicted RBP7.08□□□□□ -1.28
SQSTM1-203ENST00000422245 ODF1Q14990 250 aa7.08□□□□□ -1.28
SQSTM1-203ENST00000422245 C10orf25Q5T742 122 aa7.08□□□□□ -1.28
SQSTM1-203ENST00000422245 TMEM141Q96I45 108 aa7.08□□□□□ -1.28
SQSTM1-203ENST00000422245 MAP1LC3AQ9H492 121 aa7.08□□□□□ -1.28
SQSTM1-203ENST00000422245 C6orf48Q9UBA6 75 aa7.08□□□□□ -1.28
SQSTM1-203ENST00000422245 RNF213Q63HN8 5207 aa7.07□□□□□ -1.28
SQSTM1-203ENST00000422245 TRBV30A0A0K0K1B3 111 aa7.07□□□□□ -1.28
SQSTM1-203ENST00000422245 PRSS47A8MTI9 375 aa7.07□□□□□ -1.28
SQSTM1-203ENST00000422245 LINC00242Q5T6M2 205 aa7.07□□□□□ -1.28
SQSTM1-203ENST00000422245 UNQ6190/PRO20217Q6UXQ8 127 aa7.07□□□□□ -1.28
SQSTM1-203ENST00000422245 TEX43Q6ZNM6 134 aa7.07□□□□□ -1.28
SQSTM1-203ENST00000422245 C2orf88Q9BSF0 95 aa7.07□□□□□ -1.28
SQSTM1-203ENST00000422245 IGLV7-43P04211 117 aa7.06□□□□□ -1.28
SQSTM1-203ENST00000422245 KIAA0087Q14695 138 aa7.06□□□□□ -1.28
SQSTM1-203ENST00000422245 GAGE2EQ4V326 116 aa7.06□□□□□ -1.28
SQSTM1-203ENST00000422245 Q6ZN92 141 aa7.06□□□□□ -1.28
SQSTM1-203ENST00000422245 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
SQSTM1-203ENST00000422245 LINC01561Q8N1V8 128 aa7.06□□□□□ -1.28
SQSTM1-203ENST00000422245 DIRC1Q969H9 104 aa7.06□□□□□ -1.28
SQSTM1-203ENST00000422245 GAGE2DQ9UEU5 116 aa7.06□□□□□ -1.28
SQSTM1-203ENST00000422245 CYSLTR1Q9Y271 337 aa7.06□□□□□ -1.28
SQSTM1-203ENST00000422245 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
SQSTM1-203ENST00000422245 MT-ND4LP03901 98 aa7.05□□□□□ -1.28
SQSTM1-203ENST00000422245 NPSP0C0P6 89 aa7.05□□□□□ -1.28
SQSTM1-203ENST00000422245 UBE2D1P51668 147 aa7.05□□□□□ -1.28
SQSTM1-203ENST00000422245 ORMDL2Q53FV1 153 aa7.05□□□□□ -1.28
SQSTM1-203ENST00000422245 C2orf66Q6UXQ4 117 aa7.05□□□□□ -1.28
SQSTM1-203ENST00000422245 Q8N8P6 123 aa7.05□□□□□ -1.28
SQSTM1-203ENST00000422245 ANAPC16Q96DE5 110 aa7.05□□□□□ -1.28
SQSTM1-203ENST00000422245 PACRGQ96M98 296 aaPredicted RBP7.05□□□□□ -1.28
SQSTM1-203ENST00000422245 LOC389332A0A1B0GUA5 103 aa7.04□□□□□ -1.28
SQSTM1-203ENST00000422245 NDUFC2-KCTD14E9PQ53 114 aa7.04□□□□□ -1.28
SQSTM1-203ENST00000422245 K7EMI3 77 aa7.04□□□□□ -1.28
SQSTM1-203ENST00000422245 M0QXV9 152 aa7.04□□□□□ -1.28
SQSTM1-203ENST00000422245 H0Y9J4 135 aa7.03□□□□□ -1.28
SQSTM1-203ENST00000422245 C2orf82Q6UX34 121 aa7.03□□□□□ -1.28
SQSTM1-203ENST00000422245 AMELXQ99217 191 aa7.03□□□□□ -1.28
SQSTM1-203ENST00000422245 PRSS2P07478 247 aa7.02□□□□□ -1.29
SQSTM1-203ENST00000422245 RAB14P61106 215 aa7.02□□□□□ -1.29
SQSTM1-203ENST00000422245 UBE2BP63146 152 aa7.02□□□□□ -1.29
SQSTM1-203ENST00000422245 PAPPA-AS1Q5QFB9 102 aa7.02□□□□□ -1.29
SQSTM1-203ENST00000422245 LINC00173Q6ZV60 143 aa7.02□□□□□ -1.29
SQSTM1-203ENST00000422245 VCX2Q9H322 139 aa7.02□□□□□ -1.29
SQSTM1-203ENST00000422245 NXT2Q9NPJ8 142 aaKnown RBP7.02□□□□□ -1.29
SQSTM1-203ENST00000422245 SEC11AP67812 179 aa7.01□□□□□ -1.29
SQSTM1-203ENST00000422245 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
SQSTM1-203ENST00000422245 KRTAP7-1Q8IUC3 87 aa7.01□□□□□ -1.29
SQSTM1-203ENST00000422245 IGIPA6NJ69 53 aa7□□□□□ -1.29
SQSTM1-203ENST00000422245 G0S2P27469 103 aa7□□□□□ -1.29
SQSTM1-203ENST00000422245 CKS1BP61024 79 aa7□□□□□ -1.29
SQSTM1-203ENST00000422245 HERVK_113P63121 156 aa7□□□□□ -1.29
SQSTM1-203ENST00000422245 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
SQSTM1-203ENST00000422245 FAM19A3Q7Z5A8 133 aa7□□□□□ -1.29
SQSTM1-203ENST00000422245 Q8IZM0 81 aa7□□□□□ -1.29
SQSTM1-203ENST00000422245 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
SQSTM1-203ENST00000422245 CTDSP1Q9GZU7 261 aa7□□□□□ -1.29
SQSTM1-203ENST00000422245 IGLV1-50A0A075B6I6 118 aa6.99□□□□□ -1.29
SQSTM1-203ENST00000422245 ZC2HC1BQ5TFG8 222 aa6.99□□□□□ -1.29
SQSTM1-203ENST00000422245 TIMM17AQ99595 171 aa6.99□□□□□ -1.29
SQSTM1-203ENST00000422245 TOMM7Q9P0U1 55 aa6.99□□□□□ -1.29
SQSTM1-203ENST00000422245 C6orf226Q5I0X4 101 aa6.98□□□□□ -1.29
SQSTM1-203ENST00000422245 ALKBH7Q9BT30 221 aaPredicted RBP6.98□□□□□ -1.29
SQSTM1-203ENST00000422245 GEMIN7Q9H840 131 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms