RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 C1orf196B1AJZ1 125 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 TMEM250H0YL14 139 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.35□□□□□ -1.71
RFX3-205ENST00000420720 VCYO14598 125 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 FCER1GP30273 86 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 RPL18AQ02543 176 aaKnown RBP4.35□□□□□ -1.71
RFX3-205ENST00000420720 CT83Q5H943 113 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 C1orf137Q5JT78 98 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 FAM210AQ96ND0 272 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 OPRPNQ99935 248 aaPredicted RBP4.35□□□□□ -1.71
RFX3-205ENST00000420720 UBE2D4Q9Y2X8 147 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 APOMO95445 188 aa4.34□□□□□ -1.71
RFX3-205ENST00000420720 SPAG11BQ08648 103 aa4.34□□□□□ -1.71
RFX3-205ENST00000420720 Q6ZUT4 128 aa4.34□□□□□ -1.71
RFX3-205ENST00000420720 TCTE3Q8IZS6 198 aa4.34□□□□□ -1.71
RFX3-205ENST00000420720 TSKUQ8WUA8 353 aa4.34□□□□□ -1.71
RFX3-205ENST00000420720 C2orf48Q96LS8 159 aa4.34□□□□□ -1.71
RFX3-205ENST00000420720 SUMO2P61956 95 aaKnown RBP4.33□□□□□ -1.72
RFX3-205ENST00000420720 BLOC1S1P78537 153 aa4.33□□□□□ -1.72
RFX3-205ENST00000420720 ALKAL2Q6UX46 152 aa4.33□□□□□ -1.72
RFX3-205ENST00000420720 LINC01551Q86U37 167 aa4.33□□□□□ -1.72
RFX3-205ENST00000420720 PRR26Q8N8Z3 221 aa4.33□□□□□ -1.72
RFX3-205ENST00000420720 NRACQ8N912 160 aa4.33□□□□□ -1.72
RFX3-205ENST00000420720 KIR2DL4Q99706 377 aa4.33□□□□□ -1.72
RFX3-205ENST00000420720 OSTCQ9NRP0 149 aa4.33□□□□□ -1.72
RFX3-205ENST00000420720 CSDC2Q9Y534 153 aaKnown RBP4.33□□□□□ -1.72
RFX3-205ENST00000420720 IGLV7-43P04211 117 aa4.32□□□□□ -1.72
RFX3-205ENST00000420720 SMAGPQ0VAQ4 97 aa4.32□□□□□ -1.72
RFX3-205ENST00000420720 RIGQ13278 110 aa4.32□□□□□ -1.72
RFX3-205ENST00000420720 KRTAP11-1Q8IUC1 163 aa4.32□□□□□ -1.72
RFX3-205ENST00000420720 SMIM7Q9BQ49 75 aa4.32□□□□□ -1.72
RFX3-205ENST00000420720 EIF5A2Q9GZV4 153 aaKnown RBP4.32□□□□□ -1.72
RFX3-205ENST00000420720 A0A087WZ39 114 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 FAM168BA1KXE4 195 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 ZNF727A8MUV8 499 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 PPP1R17O96001 155 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 RPL39P62891 51 aaKnown RBP4.31□□□□□ -1.72
RFX3-205ENST00000420720 MRPL51Q4U2R6 128 aaKnown RBP4.31□□□□□ -1.72
RFX3-205ENST00000420720 OR10D4PQ8NGN7 298 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 ORAOV1Q8WV07 137 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 DIRC1Q969H9 104 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 TMEM18Q96B42 140 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 MRPL35Q9NZE8 188 aaKnown RBP4.31□□□□□ -1.72
RFX3-205ENST00000420720 V9GYV3 84 aa4.31□□□□□ -1.72
RFX3-205ENST00000420720 PPP1R2P9O14990 202 aa4.3□□□□□ -1.72
RFX3-205ENST00000420720 SRP19P09132 144 aaKnown RBP4.3□□□□□ -1.72
RFX3-205ENST00000420720 GAGE2EQ4V326 116 aa4.3□□□□□ -1.72
RFX3-205ENST00000420720 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
RFX3-205ENST00000420720 FAM104BQ5XKR9 115 aa4.3□□□□□ -1.72
RFX3-205ENST00000420720 UNQ6190/PRO20217Q6UXQ8 127 aa4.3□□□□□ -1.72
RFX3-205ENST00000420720 FAM19A5Q7Z5A7 132 aaPredicted RBP4.3□□□□□ -1.72
RFX3-205ENST00000420720 IMMP2LQ96T52 175 aa4.3□□□□□ -1.72
RFX3-205ENST00000420720 GAGE2DQ9UEU5 116 aa4.3□□□□□ -1.72
RFX3-205ENST00000420720 IGHV3OR16-9A0A0B4J2B5 98 aa4.29□□□□□ -1.72
RFX3-205ENST00000420720 H0Y9J4 135 aa4.29□□□□□ -1.72
RFX3-205ENST00000420720 NDUFA1O15239 70 aa4.29□□□□□ -1.72
RFX3-205ENST00000420720 CKS2P33552 79 aa4.29□□□□□ -1.72
RFX3-205ENST00000420720 RPL23P62829 140 aaKnown RBP4.29□□□□□ -1.72
RFX3-205ENST00000420720 FAM104AQ969W3 186 aa4.29□□□□□ -1.72
RFX3-205ENST00000420720 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
RFX3-205ENST00000420720 C6orf48Q9UBA6 75 aa4.29□□□□□ -1.72
RFX3-205ENST00000420720 NAT8BQ9UHF3 227 aa4.29□□□□□ -1.72
RFX3-205ENST00000420720 LINC00862A6NCI5 91 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 IFITM10A6NMD0 228 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 F8WDY8 70 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 TCAPO15273 167 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 TNFRSF6BO95407 300 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 TLX1NBP0CAT3 122 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 UBE2BP63146 152 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 TMEM241Q24JQ0 296 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 FAM74A3Q4VXF1 159 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
RFX3-205ENST00000420720 IGLV1-50A0A075B6I6 118 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 TRBV24-1A0A075B6N3 115 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 D6R8Y8 96 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 M0QXV9 152 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 RPL32P62910 135 aaKnown RBP4.27□□□□□ -1.73
RFX3-205ENST00000420720 HBBP68871 147 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
RFX3-205ENST00000420720 ADIRFQ15847 76 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 PRR4Q16378 134 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 AKAP14Q86UN6 197 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 SMIM2Q9BVW6 85 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 SMDT1Q9H4I9 107 aa4.27□□□□□ -1.73
RFX3-205ENST00000420720 hCG_2014768A0A024R1R8 64 aa4.26□□□□□ -1.73
RFX3-205ENST00000420720 TGIF2-C20orf24A0A0A6YYL0 155 aa4.26□□□□□ -1.73
RFX3-205ENST00000420720 SMIM27A0A1W2PRY6 76 aa4.26□□□□□ -1.73
RFX3-205ENST00000420720 NPYP01303 97 aa4.26□□□□□ -1.73
RFX3-205ENST00000420720 UBE2D1P51668 147 aa4.26□□□□□ -1.73
RFX3-205ENST00000420720 KIAA0087Q14695 138 aa4.26□□□□□ -1.73
RFX3-205ENST00000420720 MRPL54Q6P161 138 aaKnown RBP4.26□□□□□ -1.73
RFX3-205ENST00000420720 C2orf82Q6UX34 121 aa4.26□□□□□ -1.73
RFX3-205ENST00000420720 NAT8Q9UHE5 227 aa4.26□□□□□ -1.73
RFX3-205ENST00000420720 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
RFX3-205ENST00000420720 IGLV4-3A0A075B6K6 122 aa4.25□□□□□ -1.73
RFX3-205ENST00000420720 A0A1B0GW15 77 aa4.25□□□□□ -1.73
RFX3-205ENST00000420720 C9JQL5 133 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms