RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 Q6ZUT4 128 aa6.92□□□□□ -1.3
SSBP3-206ENST00000420121 DPH3Q96FX2 82 aa6.92□□□□□ -1.3
SSBP3-206ENST00000420121 C12orf57Q99622 126 aa6.92□□□□□ -1.3
SSBP3-206ENST00000420121 A0A1B0GW15 77 aa6.91□□□□□ -1.3
SSBP3-206ENST00000420121 TNFRSF6BO95407 300 aa6.91□□□□□ -1.3
SSBP3-206ENST00000420121 RPL39P62891 51 aaKnown RBP6.91□□□□□ -1.3
SSBP3-206ENST00000420121 SERTAD4-AS1Q5TG53 156 aa6.91□□□□□ -1.3
SSBP3-206ENST00000420121 MRPL54Q6P161 138 aaKnown RBP6.91□□□□□ -1.3
SSBP3-206ENST00000420121 STPG4Q8N801 248 aa6.91□□□□□ -1.3
SSBP3-206ENST00000420121 CARD19Q96LW7 228 aa6.91□□□□□ -1.3
SSBP3-206ENST00000420121 KIR2DL4Q99706 377 aa6.91□□□□□ -1.3
SSBP3-206ENST00000420121 C20orf78Q9BR46 151 aa6.91□□□□□ -1.3
SSBP3-206ENST00000420121 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
SSBP3-206ENST00000420121 C1orf196B1AJZ1 125 aa6.9□□□□□ -1.3
SSBP3-206ENST00000420121 D6R8Y8 96 aa6.9□□□□□ -1.3
SSBP3-206ENST00000420121 NPYP01303 97 aa6.9□□□□□ -1.3
SSBP3-206ENST00000420121 CKS2P33552 79 aa6.9□□□□□ -1.3
SSBP3-206ENST00000420121 SYCNQ0VAF6 134 aa6.9□□□□□ -1.3
SSBP3-206ENST00000420121 SMIM2Q9BVW6 85 aa6.9□□□□□ -1.3
SSBP3-206ENST00000420121 IGLV4-69A0A075B6H9 119 aa6.89□□□□□ -1.31
SSBP3-206ENST00000420121 HBBP68871 147 aa6.89□□□□□ -1.31
SSBP3-206ENST00000420121 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
SSBP3-206ENST00000420121 TRAV13-1A0A0B4J241 112 aa6.88□□□□□ -1.31
SSBP3-206ENST00000420121 COX7A2LO14548 114 aa6.88□□□□□ -1.31
SSBP3-206ENST00000420121 C5orf38Q86SI9 138 aa6.88□□□□□ -1.31
SSBP3-206ENST00000420121 C7orf33Q8WU49 177 aa6.88□□□□□ -1.31
SSBP3-206ENST00000420121 OPRPNQ99935 248 aaPredicted RBP6.88□□□□□ -1.31
SSBP3-206ENST00000420121 TCAPO15273 167 aa6.87□□□□□ -1.31
SSBP3-206ENST00000420121 PTTG1IPP53801 180 aa6.87□□□□□ -1.31
SSBP3-206ENST00000420121 SMAGPQ0VAQ4 97 aa6.87□□□□□ -1.31
SSBP3-206ENST00000420121 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
SSBP3-206ENST00000420121 IGHV3OR16-9A0A0B4J2B5 98 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-206ENST00000420121 PPBPP02775 128 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 S100A8P05109 93 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 MALP21145 153 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 S100PP25815 95 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 MRPS36P82909 103 aaKnown RBP6.86□□□□□ -1.31
SSBP3-206ENST00000420121 LBHQ53QV2 105 aaPredicted RBP6.86□□□□□ -1.31
SSBP3-206ENST00000420121 ATP5L2Q7Z4Y8 100 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 TMEM18Q96B42 140 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 C2orf48Q96LS8 159 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 LINC00474Q9P2X8 69 aa6.86□□□□□ -1.31
SSBP3-206ENST00000420121 LOC107984640A0A0U1RRK4 108 aa6.85□□□□□ -1.31
SSBP3-206ENST00000420121 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
SSBP3-206ENST00000420121 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.85□□□□□ -1.31
SSBP3-206ENST00000420121 SMIM6P0DI80 62 aa6.85□□□□□ -1.31
SSBP3-206ENST00000420121 PKIGQ9Y2B9 76 aa6.85□□□□□ -1.31
SSBP3-206ENST00000420121 G0S2P27469 103 aa6.84□□□□□ -1.31
SSBP3-206ENST00000420121 SRSF9Q13242 221 aaKnown RBP eCLIP6.84□□□□□ -1.31
SSBP3-206ENST00000420121 TMEM136Q6ZRR5 245 aa6.84□□□□□ -1.31
SSBP3-206ENST00000420121 ORMDL3Q8N138 153 aa6.84□□□□□ -1.31
SSBP3-206ENST00000420121 PRELID3AQ96N28 172 aa6.84□□□□□ -1.31
SSBP3-206ENST00000420121 CAMK2N2Q96S95 79 aa6.84□□□□□ -1.31
SSBP3-206ENST00000420121 PLA2G2DQ9UNK4 145 aa6.84□□□□□ -1.31
SSBP3-206ENST00000420121 A0A0J9YXV3 536 aa6.83□□□□□ -1.32
SSBP3-206ENST00000420121 APOMO95445 188 aa6.83□□□□□ -1.32
SSBP3-206ENST00000420121 SPAG11BQ08648 103 aa6.83□□□□□ -1.32
SSBP3-206ENST00000420121 GAGE2BQ13066 116 aa6.83□□□□□ -1.32
SSBP3-206ENST00000420121 OR10D4PQ8NGN7 298 aa6.83□□□□□ -1.32
SSBP3-206ENST00000420121 LINC01600Q96MT4 127 aa6.83□□□□□ -1.32
SSBP3-206ENST00000420121 IGLV4-3A0A075B6K6 122 aa6.82□□□□□ -1.32
SSBP3-206ENST00000420121 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
SSBP3-206ENST00000420121 H0Y8G0 127 aa6.82□□□□□ -1.32
SSBP3-206ENST00000420121 PNRC1Q12796 327 aaPredicted RBP6.82□□□□□ -1.32
SSBP3-206ENST00000420121 RNF151Q2KHN1 245 aa6.82□□□□□ -1.32
SSBP3-206ENST00000420121 C10orf25Q5T742 122 aa6.82□□□□□ -1.32
SSBP3-206ENST00000420121 PYGO1Q9Y3Y4 419 aa6.82□□□□□ -1.32
SSBP3-206ENST00000420121 UBR4Q5T4S7 5183 aa6.81□□□□□ -1.32
SSBP3-206ENST00000420121 IFITM10A6NMD0 228 aa6.81□□□□□ -1.32
SSBP3-206ENST00000420121 KIAA0087Q14695 138 aa6.81□□□□□ -1.32
SSBP3-206ENST00000420121 C9orf116Q5BN46 136 aaPredicted RBP6.81□□□□□ -1.32
SSBP3-206ENST00000420121 ORAOV1Q8WV07 137 aa6.81□□□□□ -1.32
SSBP3-206ENST00000420121 MRPL35Q9NZE8 188 aaKnown RBP6.81□□□□□ -1.32
SSBP3-206ENST00000420121 KRTAP10-8P60410 259 aa6.8□□□□□ -1.32
SSBP3-206ENST00000420121 RPL18AQ02543 176 aaKnown RBP6.8□□□□□ -1.32
SSBP3-206ENST00000420121 LINC00242Q5T6M2 205 aa6.8□□□□□ -1.32
SSBP3-206ENST00000420121 SPINK6Q6UWN8 80 aa6.8□□□□□ -1.32
SSBP3-206ENST00000420121 Q6ZRP5 223 aa6.8□□□□□ -1.32
SSBP3-206ENST00000420121 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
SSBP3-206ENST00000420121 LAMTOR2Q9Y2Q5 125 aa6.8□□□□□ -1.32
SSBP3-206ENST00000420121 A0A087WZ39 114 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 LOC389332A0A1B0GUA5 103 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 F8WDY8 70 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 MT-ND4LP03901 98 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 ADCYAP1P18509 176 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 RAB5AP20339 215 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 IFI27P40305 119 aaPredicted RBP6.79□□□□□ -1.32
SSBP3-206ENST00000420121 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 UNQ6190/PRO20217Q6UXQ8 127 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 Q8N8P6 123 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 C6orf48Q9UBA6 75 aa6.79□□□□□ -1.32
SSBP3-206ENST00000420121 LINC00614P0C842 121 aa6.78□□□□□ -1.32
SSBP3-206ENST00000420121 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
SSBP3-206ENST00000420121 UBE2D1P51668 147 aa6.78□□□□□ -1.32
SSBP3-206ENST00000420121 CLLU1Q5K131 121 aa6.78□□□□□ -1.32
SSBP3-206ENST00000420121 PHF5AQ7RTV0 110 aaKnown RBP6.78□□□□□ -1.32
SSBP3-206ENST00000420121 KRTAP11-1Q8IUC1 163 aa6.78□□□□□ -1.32
SSBP3-206ENST00000420121 KRTAP7-1Q8IUC3 87 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms