RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 C7orf33Q8WU49 177 aa9.41□□□□□ -0.9
UBXN4-203ENST00000416538 F8W036 122 aa9.4□□□□□ -0.9
UBXN4-203ENST00000416538 ZNF561-AS1K7EIQ3 104 aa9.4□□□□□ -0.9
UBXN4-203ENST00000416538 TCAPO15273 167 aa9.4□□□□□ -0.9
UBXN4-203ENST00000416538 PTTG1IPP53801 180 aa9.4□□□□□ -0.9
UBXN4-203ENST00000416538 SMAGPQ0VAQ4 97 aa9.39□□□□□ -0.91
UBXN4-203ENST00000416538 ODF1Q14990 250 aa9.39□□□□□ -0.91
UBXN4-203ENST00000416538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.38□□□□□ -0.91
UBXN4-203ENST00000416538 MALP21145 153 aa9.38□□□□□ -0.91
UBXN4-203ENST00000416538 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
UBXN4-203ENST00000416538 A0A0J9YXV3 536 aa9.37□□□□□ -0.91
UBXN4-203ENST00000416538 A0A1W2PNN7 141 aa9.37□□□□□ -0.91
UBXN4-203ENST00000416538 SPAG11BQ08648 103 aa9.37□□□□□ -0.91
UBXN4-203ENST00000416538 PNRC1Q12796 327 aaPredicted RBP9.37□□□□□ -0.91
UBXN4-203ENST00000416538 GAGE2BQ13066 116 aa9.37□□□□□ -0.91
UBXN4-203ENST00000416538 CAMK2N2Q96S95 79 aa9.37□□□□□ -0.91
UBXN4-203ENST00000416538 SPANXA1Q9NS26 97 aa9.37□□□□□ -0.91
UBXN4-203ENST00000416538 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
UBXN4-203ENST00000416538 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
UBXN4-203ENST00000416538 MRPS36P82909 103 aaKnown RBP9.36□□□□□ -0.91
UBXN4-203ENST00000416538 ATP5L2Q7Z4Y8 100 aa9.36□□□□□ -0.91
UBXN4-203ENST00000416538 TMEM18Q96B42 140 aa9.36□□□□□ -0.91
UBXN4-203ENST00000416538 C2orf48Q96LS8 159 aa9.36□□□□□ -0.91
UBXN4-203ENST00000416538 LINC00474Q9P2X8 69 aa9.36□□□□□ -0.91
UBXN4-203ENST00000416538 APOMO95445 188 aa9.35□□□□□ -0.91
UBXN4-203ENST00000416538 PPBPP02775 128 aa9.35□□□□□ -0.91
UBXN4-203ENST00000416538 MT-ND4LP03901 98 aa9.35□□□□□ -0.91
UBXN4-203ENST00000416538 ORMDL3Q8N138 153 aa9.35□□□□□ -0.91
UBXN4-203ENST00000416538 PRELID3AQ96N28 172 aa9.35□□□□□ -0.91
UBXN4-203ENST00000416538 CLLU1Q5K131 121 aa9.34□□□□□ -0.91
UBXN4-203ENST00000416538 C10orf25Q5T742 122 aa9.34□□□□□ -0.91
UBXN4-203ENST00000416538 TMEM136Q6ZRR5 245 aa9.34□□□□□ -0.91
UBXN4-203ENST00000416538 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
UBXN4-203ENST00000416538 ANAPC16Q96DE5 110 aa9.34□□□□□ -0.91
UBXN4-203ENST00000416538 PKIGQ9Y2B9 76 aa9.34□□□□□ -0.91
UBXN4-203ENST00000416538 IGLV4-3A0A075B6K6 122 aa9.33□□□□□ -0.92
UBXN4-203ENST00000416538 IFITM10A6NMD0 228 aa9.33□□□□□ -0.92
UBXN4-203ENST00000416538 UBR4Q5T4S7 5183 aa9.32□□□□□ -0.92
UBXN4-203ENST00000416538 RPL18AQ02543 176 aaKnown RBP9.32□□□□□ -0.92
UBXN4-203ENST00000416538 SRSF9Q13242 221 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBXN4-203ENST00000416538 C9orf116Q5BN46 136 aaPredicted RBP9.32□□□□□ -0.92
UBXN4-203ENST00000416538 OR10D4PQ8NGN7 298 aa9.32□□□□□ -0.92
UBXN4-203ENST00000416538 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
UBXN4-203ENST00000416538 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
UBXN4-203ENST00000416538 LINC00173Q6ZV60 143 aa9.31□□□□□ -0.92
UBXN4-203ENST00000416538 LOC389332A0A1B0GUA5 103 aa9.3□□□□□ -0.92
UBXN4-203ENST00000416538 PRSS47A8MTI9 375 aa9.3□□□□□ -0.92
UBXN4-203ENST00000416538 ADCYAP1P18509 176 aa9.3□□□□□ -0.92
UBXN4-203ENST00000416538 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
UBXN4-203ENST00000416538 LINC00242Q5T6M2 205 aa9.3□□□□□ -0.92
UBXN4-203ENST00000416538 Q6ZRP5 223 aa9.3□□□□□ -0.92
UBXN4-203ENST00000416538 MRPL35Q9NZE8 188 aaKnown RBP9.3□□□□□ -0.92
UBXN4-203ENST00000416538 C6orf48Q9UBA6 75 aa9.3□□□□□ -0.92
UBXN4-203ENST00000416538 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
UBXN4-203ENST00000416538 FAM168BA1KXE4 195 aa9.29□□□□□ -0.92
UBXN4-203ENST00000416538 RAB5AP20339 215 aa9.29□□□□□ -0.92
UBXN4-203ENST00000416538 IFI27P40305 119 aaPredicted RBP9.29□□□□□ -0.92
UBXN4-203ENST00000416538 RNF151Q2KHN1 245 aa9.29□□□□□ -0.92
UBXN4-203ENST00000416538 SPINK6Q6UWN8 80 aa9.29□□□□□ -0.92
UBXN4-203ENST00000416538 UNQ6190/PRO20217Q6UXQ8 127 aa9.29□□□□□ -0.92
UBXN4-203ENST00000416538 PHF5AQ7RTV0 110 aaKnown RBP9.29□□□□□ -0.92
UBXN4-203ENST00000416538 KRTAP11-1Q8IUC1 163 aa9.29□□□□□ -0.92
UBXN4-203ENST00000416538 UQCC3Q6UW78 93 aa9.28□□□□□ -0.92
UBXN4-203ENST00000416538 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
UBXN4-203ENST00000416538 TMEM141Q96I45 108 aa9.28□□□□□ -0.92
UBXN4-203ENST00000416538 MAP1LC3AQ9H492 121 aa9.28□□□□□ -0.92
UBXN4-203ENST00000416538 PSORS1C2Q9UIG4 136 aa9.28□□□□□ -0.92
UBXN4-203ENST00000416538 LAMTOR2Q9Y2Q5 125 aa9.28□□□□□ -0.92
UBXN4-203ENST00000416538 A0A087WZ39 114 aa9.27□□□□□ -0.93
UBXN4-203ENST00000416538 NDUFA1O15239 70 aa9.27□□□□□ -0.93
UBXN4-203ENST00000416538 UBE2D1P51668 147 aa9.27□□□□□ -0.93
UBXN4-203ENST00000416538 Q8N8P6 123 aa9.27□□□□□ -0.93
UBXN4-203ENST00000416538 TGIF2-C20orf24A0A0A6YYL0 155 aa9.26□□□□□ -0.93
UBXN4-203ENST00000416538 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
UBXN4-203ENST00000416538 IFITM2Q01629 132 aa9.26□□□□□ -0.93
UBXN4-203ENST00000416538 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
UBXN4-203ENST00000416538 C2orf66Q6UXQ4 117 aa9.26□□□□□ -0.93
UBXN4-203ENST00000416538 TMEM218A2RU14 115 aa9.25□□□□□ -0.93
UBXN4-203ENST00000416538 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
UBXN4-203ENST00000416538 IMMP2LQ96T52 175 aa9.25□□□□□ -0.93
UBXN4-203ENST00000416538 AMELXQ99217 191 aa9.25□□□□□ -0.93
UBXN4-203ENST00000416538 CYSLTR1Q9Y271 337 aa9.25□□□□□ -0.93
UBXN4-203ENST00000416538 IGIPA6NJ69 53 aa9.24□□□□□ -0.93
UBXN4-203ENST00000416538 LRP2P98164 4655 aa9.24□□□□□ -0.93
UBXN4-203ENST00000416538 F8WDY8 70 aa9.23□□□□□ -0.93
UBXN4-203ENST00000416538 TEX43Q6ZNM6 134 aa9.23□□□□□ -0.93
UBXN4-203ENST00000416538 FAM19A5Q7Z5A7 132 aaPredicted RBP9.23□□□□□ -0.93
UBXN4-203ENST00000416538 CTDSP1Q9GZU7 261 aa9.23□□□□□ -0.93
UBXN4-203ENST00000416538 KIAA1644Q3SXP7 199 aa9.22□□□□□ -0.93
UBXN4-203ENST00000416538 GAGE2EQ4V326 116 aa9.22□□□□□ -0.93
UBXN4-203ENST00000416538 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
UBXN4-203ENST00000416538 KRTAP4-12Q9BQ66 201 aa9.22□□□□□ -0.93
UBXN4-203ENST00000416538 GAGE2DQ9UEU5 116 aa9.22□□□□□ -0.93
UBXN4-203ENST00000416538 MT-ND6P03923 174 aa9.21□□□□□ -0.94
UBXN4-203ENST00000416538 C1orf137Q5JT78 98 aa9.21□□□□□ -0.94
UBXN4-203ENST00000416538 LCE3BQ5TA77 95 aa9.21□□□□□ -0.94
UBXN4-203ENST00000416538 ORMDL2Q53FV1 153 aa9.2□□□□□ -0.94
UBXN4-203ENST00000416538 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
UBXN4-203ENST00000416538 FAM19A3Q7Z5A8 133 aa9.2□□□□□ -0.94
UBXN4-203ENST00000416538 SEC11CQ9BY50 192 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms