RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 GVQW2A0A096LPI5 108 aaPredicted RBP6.13□□□□□ -1.43
LINC01090-201ENST00000415357 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.13□□□□□ -1.43
LINC01090-201ENST00000415357 SS18Q15532 418 aa6.13□□□□□ -1.43
LINC01090-201ENST00000415357 TMEM136Q6ZRR5 245 aa6.13□□□□□ -1.43
LINC01090-201ENST00000415357 ORMDL3Q8N138 153 aa6.13□□□□□ -1.43
LINC01090-201ENST00000415357 PRELID3AQ96N28 172 aa6.13□□□□□ -1.43
LINC01090-201ENST00000415357 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
LINC01090-201ENST00000415357 TMEM218A2RU14 115 aa6.12□□□□□ -1.43
LINC01090-201ENST00000415357 PPBPP02775 128 aa6.12□□□□□ -1.43
LINC01090-201ENST00000415357 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
LINC01090-201ENST00000415357 CD164L2Q6UWJ8 174 aa6.12□□□□□ -1.43
LINC01090-201ENST00000415357 FAM104AQ969W3 186 aa6.12□□□□□ -1.43
LINC01090-201ENST00000415357 OPRPNQ99935 248 aaPredicted RBP6.12□□□□□ -1.43
LINC01090-201ENST00000415357 CSDC2Q9Y534 153 aaKnown RBP6.12□□□□□ -1.43
LINC01090-201ENST00000415357 IGHV1-58A0A0C4DH39 117 aa6.11□□□□□ -1.43
LINC01090-201ENST00000415357 LOC389332A0A1B0GUA5 103 aa6.11□□□□□ -1.43
LINC01090-201ENST00000415357 PHOX2AO14813 284 aa6.11□□□□□ -1.43
LINC01090-201ENST00000415357 COX6A2Q02221 97 aa6.11□□□□□ -1.43
LINC01090-201ENST00000415357 SMAGPQ0VAQ4 97 aa6.11□□□□□ -1.43
LINC01090-201ENST00000415357 UQCC3Q6UW78 93 aa6.11□□□□□ -1.43
LINC01090-201ENST00000415357 PRSS3P2Q8NHM4 247 aa6.11□□□□□ -1.43
LINC01090-201ENST00000415357 TMEM18Q96B42 140 aa6.11□□□□□ -1.43
LINC01090-201ENST00000415357 TIMM21Q9BVV7 248 aa6.11□□□□□ -1.43
LINC01090-201ENST00000415357 IGKV2-24A0A0C4DH68 120 aa6.1□□□□□ -1.43
LINC01090-201ENST00000415357 C1orf196B1AJZ1 125 aa6.1□□□□□ -1.43
LINC01090-201ENST00000415357 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
LINC01090-201ENST00000415357 C5orf38Q86SI9 138 aa6.1□□□□□ -1.43
LINC01090-201ENST00000415357 COMMD7Q86VX2 200 aa6.1□□□□□ -1.43
LINC01090-201ENST00000415357 SPACA4Q8TDM5 124 aa6.1□□□□□ -1.43
LINC01090-201ENST00000415357 PKHD1L1Q86WI1 4243 aa6.1□□□□□ -1.43
LINC01090-201ENST00000415357 A0A087WYN8 130 aa6.09□□□□□ -1.43
LINC01090-201ENST00000415357 COX7A2LO14548 114 aa6.09□□□□□ -1.43
LINC01090-201ENST00000415357 RPL37AP61513 92 aaKnown RBP6.09□□□□□ -1.43
LINC01090-201ENST00000415357 DPH3Q96FX2 82 aa6.09□□□□□ -1.43
LINC01090-201ENST00000415357 MAP1LC3AQ9H492 121 aa6.09□□□□□ -1.43
LINC01090-201ENST00000415357 SPANXA1Q9NS26 97 aa6.09□□□□□ -1.43
LINC01090-201ENST00000415357 LRP1Q07954 4544 aaKnown RBP6.09□□□□□ -1.43
LINC01090-201ENST00000415357 DMBT1Q9UGM3 2413 aaPredicted RBP6.08□□□□□ -1.44
LINC01090-201ENST00000415357 IGLV4-69A0A075B6H9 119 aa6.08□□□□□ -1.44
LINC01090-201ENST00000415357 A0A096LNI7 61 aa6.08□□□□□ -1.44
LINC01090-201ENST00000415357 IFITM10A6NMD0 228 aa6.08□□□□□ -1.44
LINC01090-201ENST00000415357 RAB5AP20339 215 aa6.08□□□□□ -1.44
LINC01090-201ENST00000415357 HNRNPA3P51991 378 aaKnown RBP6.08□□□□□ -1.44
LINC01090-201ENST00000415357 MAJINQ3KP22 176 aa6.08□□□□□ -1.44
LINC01090-201ENST00000415357 KIAA1644Q3SXP7 199 aa6.08□□□□□ -1.44
LINC01090-201ENST00000415357 CARD19Q96LW7 228 aa6.08□□□□□ -1.44
LINC01090-201ENST00000415357 CTDSP1Q9GZU7 261 aa6.08□□□□□ -1.44
LINC01090-201ENST00000415357 FAT3Q8TDW7 4589 aa6.08□□□□□ -1.44
LINC01090-201ENST00000415357 IGLV4-3A0A075B6K6 122 aa6.07□□□□□ -1.44
LINC01090-201ENST00000415357 PRSS47A8MTI9 375 aa6.07□□□□□ -1.44
LINC01090-201ENST00000415357 MRPS36P82909 103 aaKnown RBP6.07□□□□□ -1.44
LINC01090-201ENST00000415357 SYCNQ0VAF6 134 aa6.07□□□□□ -1.44
LINC01090-201ENST00000415357 Q6ZRU5 148 aa6.07□□□□□ -1.44
LINC01090-201ENST00000415357 Q8N8P6 123 aa6.07□□□□□ -1.44
LINC01090-201ENST00000415357 IMMP2LQ96T52 175 aa6.07□□□□□ -1.44
LINC01090-201ENST00000415357 SEC11CQ9BY50 192 aa6.07□□□□□ -1.44
LINC01090-201ENST00000415357 LAMTOR2Q9Y2Q5 125 aa6.07□□□□□ -1.44
LINC01090-201ENST00000415357 IFI27P40305 119 aaPredicted RBP6.06□□□□□ -1.44
LINC01090-201ENST00000415357 SPAG11BQ08648 103 aa6.06□□□□□ -1.44
LINC01090-201ENST00000415357 ZC2HC1BQ5TFG8 222 aa6.06□□□□□ -1.44
LINC01090-201ENST00000415357 PLAC8Q9NZF1 115 aa6.06□□□□□ -1.44
LINC01090-201ENST00000415357 C2orf66Q6UXQ4 117 aa6.05□□□□□ -1.44
LINC01090-201ENST00000415357 STPG4Q8N801 248 aa6.05□□□□□ -1.44
LINC01090-201ENST00000415357 CAMK2N2Q96S95 79 aa6.05□□□□□ -1.44
LINC01090-201ENST00000415357 PYGO1Q9Y3Y4 419 aa6.05□□□□□ -1.44
LINC01090-201ENST00000415357 IGHV3OR16-9A0A0B4J2B5 98 aa6.04□□□□□ -1.44
LINC01090-201ENST00000415357 A0A0J9YXV3 536 aa6.04□□□□□ -1.44
LINC01090-201ENST00000415357 TRIAP1O43715 76 aa6.04□□□□□ -1.44
LINC01090-201ENST00000415357 APOMO95445 188 aa6.04□□□□□ -1.44
LINC01090-201ENST00000415357 S100PP25815 95 aa6.04□□□□□ -1.44
LINC01090-201ENST00000415357 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
LINC01090-201ENST00000415357 ORAOV1Q8WV07 137 aa6.04□□□□□ -1.44
LINC01090-201ENST00000415357 TMEM141Q96I45 108 aa6.04□□□□□ -1.44
LINC01090-201ENST00000415357 CYSLTR1Q9Y271 337 aa6.04□□□□□ -1.44
LINC01090-201ENST00000415357 TRAV9-1A0A075B6T8 112 aa6.03□□□□□ -1.44
LINC01090-201ENST00000415357 KRTAP29-1A8MX34 341 aaPredicted RBP6.03□□□□□ -1.44
LINC01090-201ENST00000415357 GAGE2BQ13066 116 aa6.03□□□□□ -1.44
LINC01090-201ENST00000415357 ORMDL2Q53FV1 153 aa6.03□□□□□ -1.44
LINC01090-201ENST00000415357 C10orf91Q5T1B1 145 aa6.03□□□□□ -1.44
LINC01090-201ENST00000415357 LINC00242Q5T6M2 205 aa6.03□□□□□ -1.44
LINC01090-201ENST00000415357 LINC00173Q6ZV60 143 aa6.03□□□□□ -1.44
LINC01090-201ENST00000415357 RPS10P5Q9NQ39 176 aa6.03□□□□□ -1.44
LINC01090-201ENST00000415357 CARHSP1Q9Y2V2 147 aaKnown RBP6.03□□□□□ -1.44
LINC01090-201ENST00000415357 TGIF2-C20orf24A0A0A6YYL0 155 aa6.02□□□□□ -1.45
LINC01090-201ENST00000415357 LOC107984640A0A0U1RRK4 108 aa6.02□□□□□ -1.45
LINC01090-201ENST00000415357 UBE2D1P51668 147 aa6.02□□□□□ -1.45
LINC01090-201ENST00000415357 TEX43Q6ZNM6 134 aa6.02□□□□□ -1.45
LINC01090-201ENST00000415357 OR10D4PQ8NGN7 298 aa6.02□□□□□ -1.45
LINC01090-201ENST00000415357 C2orf48Q96LS8 159 aa6.02□□□□□ -1.45
LINC01090-201ENST00000415357 NXT2Q9NPJ8 142 aaKnown RBP6.02□□□□□ -1.45
LINC01090-201ENST00000415357 IGIPA6NJ69 53 aa6.01□□□□□ -1.45
LINC01090-201ENST00000415357 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.01□□□□□ -1.45
LINC01090-201ENST00000415357 RPL18AQ02543 176 aaKnown RBP6.01□□□□□ -1.45
LINC01090-201ENST00000415357 RHEBQ15382 184 aa6.01□□□□□ -1.45
LINC01090-201ENST00000415357 C10orf25Q5T742 122 aa6.01□□□□□ -1.45
LINC01090-201ENST00000415357 Q6ZN92 141 aa6.01□□□□□ -1.45
LINC01090-201ENST00000415357 C7orf33Q8WU49 177 aa6.01□□□□□ -1.45
LINC01090-201ENST00000415357 AMELXQ99217 191 aa6.01□□□□□ -1.45
LINC01090-201ENST00000415357 C2orf88Q9BSF0 95 aa6.01□□□□□ -1.45
LINC01090-201ENST00000415357 ALKBH7Q9BT30 221 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms