RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CIRBPQ14011 172 aaKnown RBP12.03□□□□□ -0.48
TRIM56-202ENST00000412507 ZNF561-AS1K7EIQ3 104 aa12.02□□□□□ -0.49
TRIM56-202ENST00000412507 IFI27P40305 119 aaPredicted RBP12.02□□□□□ -0.49
TRIM56-202ENST00000412507 C5orf38Q86SI9 138 aa12.02□□□□□ -0.49
TRIM56-202ENST00000412507 PRSS3P2Q8NHM4 247 aa12.02□□□□□ -0.49
TRIM56-202ENST00000412507 DPH3Q96FX2 82 aa12.01□□□□□ -0.49
TRIM56-202ENST00000412507 PYGO1Q9Y3Y4 419 aa12.01□□□□□ -0.49
TRIM56-202ENST00000412507 TRAPPC1Q9Y5R8 145 aa12.01□□□□□ -0.49
TRIM56-202ENST00000412507 MYCBP2O75592 4640 aa12.01□□□□□ -0.49
TRIM56-202ENST00000412507 IFITM10A6NMD0 228 aa12□□□□□ -0.49
TRIM56-202ENST00000412507 SPACA4Q8TDM5 124 aa12□□□□□ -0.49
TRIM56-202ENST00000412507 IGLV4-3A0A075B6K6 122 aa11.99□□□□□ -0.49
TRIM56-202ENST00000412507 KRTAP10-4P60372 401 aaPredicted RBP11.99□□□□□ -0.49
TRIM56-202ENST00000412507 FABP9Q0Z7S8 132 aa11.99□□□□□ -0.49
TRIM56-202ENST00000412507 ORMDL2Q53FV1 153 aa11.99□□□□□ -0.49
TRIM56-202ENST00000412507 C2orf66Q6UXQ4 117 aa11.99□□□□□ -0.49
TRIM56-202ENST00000412507 CARD19Q96LW7 228 aa11.99□□□□□ -0.49
TRIM56-202ENST00000412507 MRPL18Q9H0U6 180 aaKnown RBP11.99□□□□□ -0.49
TRIM56-202ENST00000412507 NXT2Q9NPJ8 142 aaKnown RBP11.99□□□□□ -0.49
TRIM56-202ENST00000412507 CYSLTR1Q9Y271 337 aa11.99□□□□□ -0.49
TRIM56-202ENST00000412507 IGLV4-69A0A075B6H9 119 aa11.98□□□□□ -0.49
TRIM56-202ENST00000412507 A0A087WYN8 130 aa11.98□□□□□ -0.49
TRIM56-202ENST00000412507 IGKV2-24A0A0C4DH68 120 aa11.98□□□□□ -0.49
TRIM56-202ENST00000412507 SYCNQ0VAF6 134 aa11.98□□□□□ -0.49
TRIM56-202ENST00000412507 TMEM141Q96I45 108 aa11.97□□□□□ -0.49
TRIM56-202ENST00000412507 IGHV3OR16-9A0A0B4J2B5 98 aa11.96□□□□□ -0.49
TRIM56-202ENST00000412507 K7EMI3 77 aa11.96□□□□□ -0.49
TRIM56-202ENST00000412507 APOMO95445 188 aa11.96□□□□□ -0.49
TRIM56-202ENST00000412507 DMBT1Q9UGM3 2413 aaPredicted RBP11.96□□□□□ -0.5
TRIM56-202ENST00000412507 A0A096LNI7 61 aa11.95□□□□□ -0.5
TRIM56-202ENST00000412507 RPL37AP61513 92 aaKnown RBP11.95□□□□□ -0.5
TRIM56-202ENST00000412507 MAJINQ3KP22 176 aa11.95□□□□□ -0.5
TRIM56-202ENST00000412507 Q6ZRU5 148 aa11.95□□□□□ -0.5
TRIM56-202ENST00000412507 SPAG11BQ08648 103 aa11.94□□□□□ -0.5
TRIM56-202ENST00000412507 ZC2HC1BQ5TFG8 222 aa11.94□□□□□ -0.5
TRIM56-202ENST00000412507 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
TRIM56-202ENST00000412507 CAMK2N2Q96S95 79 aa11.94□□□□□ -0.5
TRIM56-202ENST00000412507 PKHD1L1Q86WI1 4243 aa11.93□□□□□ -0.5
TRIM56-202ENST00000412507 TRGC2P03986 189 aa11.93□□□□□ -0.5
TRIM56-202ENST00000412507 LINC00242Q5T6M2 205 aa11.93□□□□□ -0.5
TRIM56-202ENST00000412507 ORAOV1Q8WV07 137 aa11.93□□□□□ -0.5
TRIM56-202ENST00000412507 C2orf48Q96LS8 159 aa11.93□□□□□ -0.5
TRIM56-202ENST00000412507 ALKBH7Q9BT30 221 aaPredicted RBP11.93□□□□□ -0.5
TRIM56-202ENST00000412507 PLAC8Q9NZF1 115 aa11.93□□□□□ -0.5
TRIM56-202ENST00000412507 LINC00173Q6ZV60 143 aa11.92□□□□□ -0.5
TRIM56-202ENST00000412507 OR10D4PQ8NGN7 298 aa11.92□□□□□ -0.5
TRIM56-202ENST00000412507 PKIGQ9Y2B9 76 aa11.92□□□□□ -0.5
TRIM56-202ENST00000412507 IGIPA6NJ69 53 aa11.91□□□□□ -0.5
TRIM56-202ENST00000412507 UBE2D1P51668 147 aa11.91□□□□□ -0.5
TRIM56-202ENST00000412507 Q6ZN92 141 aa11.91□□□□□ -0.5
TRIM56-202ENST00000412507 STPG4Q8N801 248 aa11.91□□□□□ -0.5
TRIM56-202ENST00000412507 AMELXQ99217 191 aa11.91□□□□□ -0.5
TRIM56-202ENST00000412507 C2orf88Q9BSF0 95 aa11.91□□□□□ -0.5
TRIM56-202ENST00000412507 VCX2Q9H322 139 aa11.91□□□□□ -0.5
TRIM56-202ENST00000412507 NPSP0C0P6 89 aa11.89□□□□□ -0.51
TRIM56-202ENST00000412507 G0S2P27469 103 aa11.89□□□□□ -0.51
TRIM56-202ENST00000412507 TOMM6Q96B49 74 aa11.89□□□□□ -0.51
TRIM56-202ENST00000412507 A0A087WZ39 114 aa11.88□□□□□ -0.51
TRIM56-202ENST00000412507 LOC107984640A0A0U1RRK4 108 aa11.88□□□□□ -0.51
TRIM56-202ENST00000412507 LINC00474Q9P2X8 69 aa11.88□□□□□ -0.51
TRIM56-202ENST00000412507 A0A0J9YXV3 536 aa11.87□□□□□ -0.51
TRIM56-202ENST00000412507 GAGE2BQ13066 116 aa11.87□□□□□ -0.51
TRIM56-202ENST00000412507 TIMM17AQ99595 171 aa11.87□□□□□ -0.51
TRIM56-202ENST00000412507 LINC01546A6NGU7 62 aa11.86□□□□□ -0.51
TRIM56-202ENST00000412507 HNRNPA3P51991 378 aaKnown RBP11.86□□□□□ -0.51
TRIM56-202ENST00000412507 PTTG1IPP53801 180 aa11.86□□□□□ -0.51
TRIM56-202ENST00000412507 LRP1Q07954 4544 aaKnown RBP11.86□□□□□ -0.51
TRIM56-202ENST00000412507 HERC1Q15751 4861 aa11.86□□□□□ -0.51
TRIM56-202ENST00000412507 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
TRIM56-202ENST00000412507 RAB5BP61020 215 aa11.85□□□□□ -0.51
TRIM56-202ENST00000412507 PAPPA-AS1Q5QFB9 102 aa11.85□□□□□ -0.51
TRIM56-202ENST00000412507 SCGB3A1Q96QR1 104 aa11.85□□□□□ -0.51
TRIM56-202ENST00000412507 FAT3Q8TDW7 4589 aa11.85□□□□□ -0.51
TRIM56-202ENST00000412507 F8WDY8 70 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 NDUFA1O15239 70 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 KIAA0087Q14695 138 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 RNF151Q2KHN1 245 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 UNQ6190/PRO20217Q6UXQ8 127 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 FA2HQ7L5A8 372 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 ERASQ7Z444 233 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 FAM19A3Q7Z5A8 133 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 C7orf33Q8WU49 177 aa11.84□□□□□ -0.51
TRIM56-202ENST00000412507 MRPL35Q9NZE8 188 aaKnown RBP11.84□□□□□ -0.51
TRIM56-202ENST00000412507 RPL18AQ02543 176 aaKnown RBP11.83□□□□□ -0.52
TRIM56-202ENST00000412507 C18orf32Q8TCD1 76 aa11.83□□□□□ -0.52
TRIM56-202ENST00000412507 J3QL48 77 aa11.82□□□□□ -0.52
TRIM56-202ENST00000412507 LINC01561Q8N1V8 128 aa11.82□□□□□ -0.52
TRIM56-202ENST00000412507 KRTAP29-1A8MX34 341 aaPredicted RBP11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST1H2BKO60814 126 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST1H2BJP06899 126 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST1H2BOP23527 126 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST1H2BBP33778 126 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST1H2BDP58876 126 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST1H2BCP62807 126 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST2H2BEQ16778 126 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST1H2BHQ93079 126 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST1H2BNQ99877 126 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 HIST1H2BMQ99879 126 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms