RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 M0QXV9 152 aa8.15□□□□□ -1.11
CACNA1C-216ENST00000399638 IGLV1-47P01700 117 aa8.15□□□□□ -1.11
CACNA1C-216ENST00000399638 SPANXB1Q9NS25 103 aaPredicted RBP8.15□□□□□ -1.11
CACNA1C-216ENST00000399638 SETD2Q9BYW2 2564 aaPredicted RBP8.15□□□□□ -1.11
CACNA1C-216ENST00000399638 TRBV6-8A0A0A6YYG3 113 aa8.14□□□□□ -1.11
CACNA1C-216ENST00000399638 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
CACNA1C-216ENST00000399638 LELP1Q5T871 98 aa8.14□□□□□ -1.11
CACNA1C-216ENST00000399638 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
CACNA1C-216ENST00000399638 CCDC140Q96MF4 163 aa8.14□□□□□ -1.11
CACNA1C-216ENST00000399638 RNASE3P12724 160 aaKnown RBP8.14□□□□□ -1.11
CACNA1C-216ENST00000399638 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
CACNA1C-216ENST00000399638 PSMG3-AS1Q96PY0 264 aa8.13□□□□□ -1.11
CACNA1C-216ENST00000399638 ZFYVE26Q68DK2 2539 aa8.13□□□□□ -1.11
CACNA1C-216ENST00000399638 NDUFA7O95182 113 aa8.13□□□□□ -1.11
CACNA1C-216ENST00000399638 C16orf90A8MZG2 172 aa8.13□□□□□ -1.11
CACNA1C-216ENST00000399638 EBI3Q14213 229 aa8.13□□□□□ -1.11
CACNA1C-216ENST00000399638 LINC00310P59036 64 aa8.13□□□□□ -1.11
CACNA1C-216ENST00000399638 LINC00467Q9BRT7 94 aa8.13□□□□□ -1.11
CACNA1C-216ENST00000399638 LINC00574Q9H8X3 128 aa8.12□□□□□ -1.11
CACNA1C-216ENST00000399638 MUC22E2RYF6 1773 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-216ENST00000399638 E9PLD3 99 aa8.12□□□□□ -1.11
CACNA1C-216ENST00000399638 H7C423 109 aa8.11□□□□□ -1.11
CACNA1C-216ENST00000399638 K7EQG2 157 aa8.11□□□□□ -1.11
CACNA1C-216ENST00000399638 USP9XQ93008 2570 aaPredicted RBP8.11□□□□□ -1.11
CACNA1C-216ENST00000399638 TOMM6Q96B49 74 aa8.11□□□□□ -1.11
CACNA1C-216ENST00000399638 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
CACNA1C-216ENST00000399638 IGKV2-30P06310 120 aa8.1□□□□□ -1.11
CACNA1C-216ENST00000399638 LINC00208Q96KT6 92 aa8.1□□□□□ -1.11
CACNA1C-216ENST00000399638 NEXN-AS1Q8NBZ9 246 aa8.1□□□□□ -1.11
CACNA1C-216ENST00000399638 TNRC6AQ8NDV7 1962 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-216ENST00000399638 DSCAMO60469 2012 aa8.09□□□□□ -1.11
CACNA1C-216ENST00000399638 BRWD1-AS2P59051 145 aa8.09□□□□□ -1.11
CACNA1C-216ENST00000399638 ABCA12Q86UK0 2595 aa8.09□□□□□ -1.11
CACNA1C-216ENST00000399638 ACYP2P14621 99 aa8.09□□□□□ -1.11
CACNA1C-216ENST00000399638 DHRS4-AS1Q9P1J3 65 aa8.09□□□□□ -1.11
CACNA1C-216ENST00000399638 LTBP2Q14767 1821 aa8.09□□□□□ -1.11
CACNA1C-216ENST00000399638 LINC00694P0DN24 101 aa8.09□□□□□ -1.11
CACNA1C-216ENST00000399638 Q6ZTC4 211 aa8.09□□□□□ -1.11
CACNA1C-216ENST00000399638 TECTAO75443 2155 aa8.08□□□□□ -1.12
CACNA1C-216ENST00000399638 SSBP3-AS1Q7Z2R9 100 aa8.08□□□□□ -1.12
CACNA1C-216ENST00000399638 C10orf142B7Z368 130 aa8.08□□□□□ -1.12
CACNA1C-216ENST00000399638 CFAP126Q5VTH2 177 aa8.08□□□□□ -1.12
CACNA1C-216ENST00000399638 TRBV6-4A0A1B0GX49 114 aa8.08□□□□□ -1.12
CACNA1C-216ENST00000399638 PDE6GP18545 87 aa8.08□□□□□ -1.12
CACNA1C-216ENST00000399638 REG3GQ6UW15 175 aa8.08□□□□□ -1.12
CACNA1C-216ENST00000399638 COX6B2Q6YFQ2 88 aa8.08□□□□□ -1.12
CACNA1C-216ENST00000399638 MSMPQ1L6U9 139 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 FAM19A3Q7Z5A8 133 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 C20orf173Q96LM9 149 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 SPRY4Q9C004 299 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 M0R378 163 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 GDF5OSQ5U4N7 250 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 ZNF462Q96JM2 2506 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 E7EUB6 86 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 PROK1P58294 105 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 C11orf71Q6IPW1 123 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 C6orf223Q8N319 242 aa8.07□□□□□ -1.12
CACNA1C-216ENST00000399638 C2orf48Q96LS8 159 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 NUP210LQ5VU65 1888 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 LRRK2Q5S007 2527 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 C2orf91Q6ZV80 131 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 ODF3Q96PU9 254 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 C11orf86A6NJI1 115 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 FHL2Q14192 279 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 C20orf203Q8NBC4 194 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 VPREB1P12018 145 aa8.06□□□□□ -1.12
CACNA1C-216ENST00000399638 CCDC179H3BU77 68 aa8.05□□□□□ -1.12
CACNA1C-216ENST00000399638 LST1O00453 97 aa8.05□□□□□ -1.12
CACNA1C-216ENST00000399638 CEP295Q9C0D2 2601 aa8.05□□□□□ -1.12
CACNA1C-216ENST00000399638 USP9YO00507 2555 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-216ENST00000399638 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
CACNA1C-216ENST00000399638 A8MZ25 164 aa8.04□□□□□ -1.12
CACNA1C-216ENST00000399638 MRGPRG-AS1Q2M3A8 158 aa8.04□□□□□ -1.12
CACNA1C-216ENST00000399638 LINC00643Q86TS7 51 aa8.04□□□□□ -1.12
CACNA1C-216ENST00000399638 NOTCH4Q99466 2003 aa8.04□□□□□ -1.12
CACNA1C-216ENST00000399638 UQCRQO14949 82 aa8.04□□□□□ -1.12
CACNA1C-216ENST00000399638 C6orf99Q4VX62 202 aa8.03□□□□□ -1.12
CACNA1C-216ENST00000399638 CD164L2Q6UWJ8 174 aa8.03□□□□□ -1.12
CACNA1C-216ENST00000399638 C1orf229Q6ZS94 237 aaPredicted RBP8.03□□□□□ -1.12
CACNA1C-216ENST00000399638 PKD1L2Q7Z442 2459 aa8.03□□□□□ -1.12
CACNA1C-216ENST00000399638 F8P00451 2351 aa8.03□□□□□ -1.12
CACNA1C-216ENST00000399638 Q6ZS46 218 aa8.02□□□□□ -1.12
CACNA1C-216ENST00000399638 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
CACNA1C-216ENST00000399638 PRM2P04554 102 aa8.02□□□□□ -1.13
CACNA1C-216ENST00000399638 APLNQ9ULZ1 77 aa8.02□□□□□ -1.13
CACNA1C-216ENST00000399638 DSCAML1Q8TD84 2053 aa8.01□□□□□ -1.13
CACNA1C-216ENST00000399638 PCNTO95613 3336 aa8.01□□□□□ -1.13
CACNA1C-216ENST00000399638 TRBV6-5A0A0K0K1A5 114 aa8□□□□□ -1.13
CACNA1C-216ENST00000399638 TRBV30A0A0K0K1B3 111 aa8□□□□□ -1.13
CACNA1C-216ENST00000399638 C2orf16Q68DN1 1984 aa8□□□□□ -1.13
CACNA1C-216ENST00000399638 TP73-AS1Q9UF72 201 aa8□□□□□ -1.13
CACNA1C-216ENST00000399638 SPACA4Q8TDM5 124 aa8□□□□□ -1.13
CACNA1C-216ENST00000399638 WWC2-AS2Q96NR7 200 aa7.99□□□□□ -1.13
CACNA1C-216ENST00000399638 A0A0J9YXY3 114 aa7.99□□□□□ -1.13
CACNA1C-216ENST00000399638 PLXNB1O43157 2135 aa7.99□□□□□ -1.13
CACNA1C-216ENST00000399638 NCOA6Q14686 2063 aaPredicted RBP7.99□□□□□ -1.13
CACNA1C-216ENST00000399638 LINC00959A0A1B0GUT2 108 aa7.99□□□□□ -1.13
CACNA1C-216ENST00000399638 EDN2P20800 178 aa7.99□□□□□ -1.13
CACNA1C-216ENST00000399638 PYGO1Q9Y3Y4 419 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms