RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 TRBV6-5A0A0K0K1A5 114 aa8.14□□□□□ -1.11
CACNA1C-215ENST00000399637 RNASE3P12724 160 aaKnown RBP8.14□□□□□ -1.11
CACNA1C-215ENST00000399637 MUC6Q6W4X9 2439 aa8.14□□□□□ -1.11
CACNA1C-215ENST00000399637 PSMG3-AS1Q96PY0 264 aa8.13□□□□□ -1.11
CACNA1C-215ENST00000399637 NDUFA7O95182 113 aa8.13□□□□□ -1.11
CACNA1C-215ENST00000399637 C16orf90A8MZG2 172 aa8.13□□□□□ -1.11
CACNA1C-215ENST00000399637 EBI3Q14213 229 aa8.13□□□□□ -1.11
CACNA1C-215ENST00000399637 GDF5OSQ5U4N7 250 aa8.13□□□□□ -1.11
CACNA1C-215ENST00000399637 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
CACNA1C-215ENST00000399637 ROS1P08922 2347 aa8.13□□□□□ -1.11
CACNA1C-215ENST00000399637 LINC00310P59036 64 aa8.13□□□□□ -1.11
CACNA1C-215ENST00000399637 COX17Q14061 63 aa8.13□□□□□ -1.11
CACNA1C-215ENST00000399637 LINC00574Q9H8X3 128 aa8.12□□□□□ -1.11
CACNA1C-215ENST00000399637 MUC22E2RYF6 1773 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-215ENST00000399637 OTOGLQ3ZCN5 2332 aa8.11□□□□□ -1.11
CACNA1C-215ENST00000399637 LINC00959A0A1B0GUT2 108 aa8.11□□□□□ -1.11
CACNA1C-215ENST00000399637 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
CACNA1C-215ENST00000399637 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
CACNA1C-215ENST00000399637 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
CACNA1C-215ENST00000399637 IGKV2-30P06310 120 aa8.1□□□□□ -1.11
CACNA1C-215ENST00000399637 LINC00208Q96KT6 92 aa8.1□□□□□ -1.11
CACNA1C-215ENST00000399637 FSTL3O95633 263 aa8.1□□□□□ -1.11
CACNA1C-215ENST00000399637 DSCAMO60469 2012 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 PCNX2A6NKB5 2137 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 RNF185Q96GF1 192 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 TSHBP01222 138 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 BRWD1-AS2P59051 145 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 ACYP2P14621 99 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 SMIM11BQ8TCY0 68 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 LTBP2Q14767 1821 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 MED13Q9UHV7 2174 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 LINC00694P0DN24 101 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 Q6ZTC4 211 aa8.09□□□□□ -1.11
CACNA1C-215ENST00000399637 SPTAN1Q13813 2472 aaKnown RBP8.09□□□□□ -1.12
CACNA1C-215ENST00000399637 MRPS12O15235 138 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-215ENST00000399637 SSBP3-AS1Q7Z2R9 100 aa8.08□□□□□ -1.12
CACNA1C-215ENST00000399637 C10orf142B7Z368 130 aa8.08□□□□□ -1.12
CACNA1C-215ENST00000399637 MAPKAPK5-AS1Q8N8E1 139 aa8.08□□□□□ -1.12
CACNA1C-215ENST00000399637 SMIM26A0A096LP01 95 aa8.08□□□□□ -1.12
CACNA1C-215ENST00000399637 REG3GQ6UW15 175 aa8.08□□□□□ -1.12
CACNA1C-215ENST00000399637 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-215ENST00000399637 COX6B2Q6YFQ2 88 aa8.08□□□□□ -1.12
CACNA1C-215ENST00000399637 C11orf71Q6IPW1 123 aa8.07□□□□□ -1.12
CACNA1C-215ENST00000399637 MALRD1Q5VYJ5 2156 aa8.07□□□□□ -1.12
CACNA1C-215ENST00000399637 A8MZ25 164 aa8.07□□□□□ -1.12
CACNA1C-215ENST00000399637 C6orf223Q8N319 242 aa8.07□□□□□ -1.12
CACNA1C-215ENST00000399637 MRPS36P82909 103 aaKnown RBP8.06□□□□□ -1.12
CACNA1C-215ENST00000399637 C2orf48Q96LS8 159 aa8.06□□□□□ -1.12
CACNA1C-215ENST00000399637 NUP210LQ5VU65 1888 aa8.06□□□□□ -1.12
CACNA1C-215ENST00000399637 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
CACNA1C-215ENST00000399637 C2orf91Q6ZV80 131 aa8.06□□□□□ -1.12
CACNA1C-215ENST00000399637 CRIP1P50238 77 aa8.06□□□□□ -1.12
CACNA1C-215ENST00000399637 FHL2Q14192 279 aa8.06□□□□□ -1.12
CACNA1C-215ENST00000399637 NBASA2RRP1 2371 aa8.06□□□□□ -1.12
CACNA1C-215ENST00000399637 CCDC179H3BU77 68 aa8.05□□□□□ -1.12
CACNA1C-215ENST00000399637 FAM208BQ5VWN6 2430 aa8.05□□□□□ -1.12
CACNA1C-215ENST00000399637 C1orf229Q6ZS94 237 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-215ENST00000399637 MUC7Q8TAX7 377 aa8.05□□□□□ -1.12
CACNA1C-215ENST00000399637 LST1O00453 97 aa8.05□□□□□ -1.12
CACNA1C-215ENST00000399637 Q8IZM0 81 aa8.05□□□□□ -1.12
CACNA1C-215ENST00000399637 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
CACNA1C-215ENST00000399637 IMUPQ9GZP8 106 aa8.04□□□□□ -1.12
CACNA1C-215ENST00000399637 MRGPRG-AS1Q2M3A8 158 aa8.04□□□□□ -1.12
CACNA1C-215ENST00000399637 NOTCH4Q99466 2003 aa8.04□□□□□ -1.12
CACNA1C-215ENST00000399637 Q6ZS46 218 aa8.02□□□□□ -1.12
CACNA1C-215ENST00000399637 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
CACNA1C-215ENST00000399637 PRM2P04554 102 aa8.02□□□□□ -1.13
CACNA1C-215ENST00000399637 APLNQ9ULZ1 77 aa8.02□□□□□ -1.13
CACNA1C-215ENST00000399637 COX7CP15954 63 aa8.01□□□□□ -1.13
CACNA1C-215ENST00000399637 ZFHX2Q9C0A1 2572 aaPredicted RBP8.01□□□□□ -1.13
CACNA1C-215ENST00000399637 CYSRT1A8MQ03 144 aa8.01□□□□□ -1.13
CACNA1C-215ENST00000399637 Q6JHZ5 121 aa8.01□□□□□ -1.13
CACNA1C-215ENST00000399637 PCNTO95613 3336 aa8.01□□□□□ -1.13
CACNA1C-215ENST00000399637 TECTAO75443 2155 aa8.01□□□□□ -1.13
CACNA1C-215ENST00000399637 NRACQ8N912 160 aa8.01□□□□□ -1.13
CACNA1C-215ENST00000399637 C2orf16Q68DN1 1984 aa8□□□□□ -1.13
CACNA1C-215ENST00000399637 GPR179Q6PRD1 2367 aa8□□□□□ -1.13
CACNA1C-215ENST00000399637 TP73-AS1Q9UF72 201 aa8□□□□□ -1.13
CACNA1C-215ENST00000399637 SPACA4Q8TDM5 124 aa8□□□□□ -1.13
CACNA1C-215ENST00000399637 WWC2-AS2Q96NR7 200 aa7.99□□□□□ -1.13
CACNA1C-215ENST00000399637 PRR9Q5T870 116 aa7.99□□□□□ -1.13
CACNA1C-215ENST00000399637 NCOA6Q14686 2063 aaPredicted RBP7.99□□□□□ -1.13
CACNA1C-215ENST00000399637 EDN2P20800 178 aa7.99□□□□□ -1.13
CACNA1C-215ENST00000399637 KLLNB2CW77 178 aa7.99□□□□□ -1.13
CACNA1C-215ENST00000399637 CDC42SE2Q9NRR3 84 aa7.99□□□□□ -1.13
CACNA1C-215ENST00000399637 IGLV1-40P01703 118 aa7.98□□□□□ -1.13
CACNA1C-215ENST00000399637 H0Y9P7 68 aa7.98□□□□□ -1.13
CACNA1C-215ENST00000399637 COX6A2Q02221 97 aa7.98□□□□□ -1.13
CACNA1C-215ENST00000399637 PRO3102Q9H379 93 aa7.98□□□□□ -1.13
CACNA1C-215ENST00000399637 EGFEM1PQ0D2K5 195 aa7.97□□□□□ -1.13
CACNA1C-215ENST00000399637 Q8N6K4 173 aa7.97□□□□□ -1.13
CACNA1C-215ENST00000399637 CENPFP49454 3210 aa7.97□□□□□ -1.13
CACNA1C-215ENST00000399637 CDSNQ15517 529 aa7.97□□□□□ -1.13
CACNA1C-215ENST00000399637 A0A1B0GU69 56 aa7.97□□□□□ -1.13
CACNA1C-215ENST00000399637 HCG22E2RYF7 251 aa7.96□□□□□ -1.13
CACNA1C-215ENST00000399637 FHL3Q13643 280 aa7.96□□□□□ -1.13
CACNA1C-215ENST00000399637 Q9BRP9 147 aa7.96□□□□□ -1.14
CACNA1C-215ENST00000399637 TRAV7A0A075B6U4 112 aa7.96□□□□□ -1.14
CACNA1C-215ENST00000399637 NTM-AS1Q6ZSK4 140 aa7.96□□□□□ -1.14
CACNA1C-215ENST00000399637 Q8N814 137 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms