RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
SMIM11A-203ENST00000399299 IGHV3OR16-9A0A0B4J2B5 98 aa9.37□□□□□ -0.91
SMIM11A-203ENST00000399299 ADCYAP1P18509 176 aa9.37□□□□□ -0.91
SMIM11A-203ENST00000399299 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
SMIM11A-203ENST00000399299 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
SMIM11A-203ENST00000399299 OR10D4PQ8NGN7 298 aa9.37□□□□□ -0.91
SMIM11A-203ENST00000399299 OPRPNQ99935 248 aaPredicted RBP9.37□□□□□ -0.91
SMIM11A-203ENST00000399299 TMEM218A2RU14 115 aa9.36□□□□□ -0.91
SMIM11A-203ENST00000399299 IFITM10A6NMD0 228 aa9.36□□□□□ -0.91
SMIM11A-203ENST00000399299 Q6ZRU5 148 aa9.36□□□□□ -0.91
SMIM11A-203ENST00000399299 Q8N8P6 123 aa9.36□□□□□ -0.91
SMIM11A-203ENST00000399299 CAMK2N2Q96S95 79 aa9.36□□□□□ -0.91
SMIM11A-203ENST00000399299 CTDSP1Q9GZU7 261 aa9.36□□□□□ -0.91
SMIM11A-203ENST00000399299 LOC107984640A0A0U1RRK4 108 aa9.35□□□□□ -0.91
SMIM11A-203ENST00000399299 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
SMIM11A-203ENST00000399299 K7EMI3 77 aa9.35□□□□□ -0.91
SMIM11A-203ENST00000399299 IGLV4-3A0A075B6K6 122 aa9.34□□□□□ -0.91
SMIM11A-203ENST00000399299 TRAV9-1A0A075B6T8 112 aa9.34□□□□□ -0.91
SMIM11A-203ENST00000399299 F8WDY8 70 aa9.34□□□□□ -0.91
SMIM11A-203ENST00000399299 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
SMIM11A-203ENST00000399299 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
SMIM11A-203ENST00000399299 SEC11CQ9BY50 192 aa9.34□□□□□ -0.91
SMIM11A-203ENST00000399299 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
SMIM11A-203ENST00000399299 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
SMIM11A-203ENST00000399299 RNF151Q2KHN1 245 aa9.33□□□□□ -0.92
SMIM11A-203ENST00000399299 ORMDL2Q53FV1 153 aa9.33□□□□□ -0.92
SMIM11A-203ENST00000399299 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
SMIM11A-203ENST00000399299 CYSLTR1Q9Y271 337 aa9.33□□□□□ -0.92
SMIM11A-203ENST00000399299 TGIF2-C20orf24A0A0A6YYL0 155 aa9.32□□□□□ -0.92
SMIM11A-203ENST00000399299 NPSP0C0P6 89 aa9.32□□□□□ -0.92
SMIM11A-203ENST00000399299 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
SMIM11A-203ENST00000399299 ORAOV1Q8WV07 137 aa9.32□□□□□ -0.92
SMIM11A-203ENST00000399299 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
SMIM11A-203ENST00000399299 PRR3P79522 188 aaKnown RBP9.31□□□□□ -0.92
SMIM11A-203ENST00000399299 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
SMIM11A-203ENST00000399299 MRPL35Q9NZE8 188 aaKnown RBP9.31□□□□□ -0.92
SMIM11A-203ENST00000399299 A0A087WZ39 114 aa9.3□□□□□ -0.92
SMIM11A-203ENST00000399299 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.3□□□□□ -0.92
SMIM11A-203ENST00000399299 GAGE2BQ13066 116 aa9.3□□□□□ -0.92
SMIM11A-203ENST00000399299 LINC00242Q5T6M2 205 aa9.3□□□□□ -0.92
SMIM11A-203ENST00000399299 C2orf88Q9BSF0 95 aa9.3□□□□□ -0.92
SMIM11A-203ENST00000399299 NDUFA1O15239 70 aa9.29□□□□□ -0.92
SMIM11A-203ENST00000399299 G0S2P27469 103 aa9.29□□□□□ -0.92
SMIM11A-203ENST00000399299 UBE2D1P51668 147 aa9.29□□□□□ -0.92
SMIM11A-203ENST00000399299 Q6ZN92 141 aa9.29□□□□□ -0.92
SMIM11A-203ENST00000399299 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
SMIM11A-203ENST00000399299 AMELXQ99217 191 aa9.29□□□□□ -0.92
SMIM11A-203ENST00000399299 S100PP25815 95 aa9.28□□□□□ -0.92
SMIM11A-203ENST00000399299 COMMD7Q86VX2 200 aa9.28□□□□□ -0.92
SMIM11A-203ENST00000399299 LINC01561Q8N1V8 128 aa9.28□□□□□ -0.92
SMIM11A-203ENST00000399299 IGIPA6NJ69 53 aa9.27□□□□□ -0.93
SMIM11A-203ENST00000399299 RPL18AQ02543 176 aaKnown RBP9.27□□□□□ -0.93
SMIM11A-203ENST00000399299 C10orf91Q5T1B1 145 aa9.27□□□□□ -0.93
SMIM11A-203ENST00000399299 SERTAD4-AS1Q5TG53 156 aa9.27□□□□□ -0.93
SMIM11A-203ENST00000399299 GNB1LQ9BYB4 327 aa9.27□□□□□ -0.93
SMIM11A-203ENST00000399299 VCX2Q9H322 139 aa9.27□□□□□ -0.93
SMIM11A-203ENST00000399299 A0A0J9YXV3 536 aa9.26□□□□□ -0.93
SMIM11A-203ENST00000399299 TLX1NBP0CAT3 122 aa9.26□□□□□ -0.93
SMIM11A-203ENST00000399299 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
SMIM11A-203ENST00000399299 KIAA1644Q3SXP7 199 aa9.26□□□□□ -0.93
SMIM11A-203ENST00000399299 COX19Q49B96 90 aa9.26□□□□□ -0.93
SMIM11A-203ENST00000399299 PAPPA-AS1Q5QFB9 102 aa9.26□□□□□ -0.93
SMIM11A-203ENST00000399299 FAM19A3Q7Z5A8 133 aa9.26□□□□□ -0.93
SMIM11A-203ENST00000399299 A0A1W2PNN7 141 aa9.25□□□□□ -0.93
SMIM11A-203ENST00000399299 C9orf116Q5BN46 136 aaPredicted RBP9.25□□□□□ -0.93
SMIM11A-203ENST00000399299 C10orf25Q5T742 122 aa9.25□□□□□ -0.93
SMIM11A-203ENST00000399299 Q6ZRP5 223 aa9.25□□□□□ -0.93
SMIM11A-203ENST00000399299 TOMM6Q96B49 74 aa9.25□□□□□ -0.93
SMIM11A-203ENST00000399299 TIMM17AQ99595 171 aa9.25□□□□□ -0.93
SMIM11A-203ENST00000399299 CARHSP1Q9Y2V2 147 aaKnown RBP9.25□□□□□ -0.93
SMIM11A-203ENST00000399299 MT1HL1P0DM35 61 aa9.24□□□□□ -0.93
SMIM11A-203ENST00000399299 RHEBQ15382 184 aa9.24□□□□□ -0.93
SMIM11A-203ENST00000399299 ZC2HC1BQ5TFG8 222 aa9.24□□□□□ -0.93
SMIM11A-203ENST00000399299 UNQ6190/PRO20217Q6UXQ8 127 aa9.24□□□□□ -0.93
SMIM11A-203ENST00000399299 C6orf48Q9UBA6 75 aa9.24□□□□□ -0.93
SMIM11A-203ENST00000399299 TRBV30A0A0K0K1B3 111 aa9.23□□□□□ -0.93
SMIM11A-203ENST00000399299 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
SMIM11A-203ENST00000399299 LINC01549A6NIU2 74 aa9.23□□□□□ -0.93
SMIM11A-203ENST00000399299 MT-ND6P03923 174 aa9.23□□□□□ -0.93
SMIM11A-203ENST00000399299 SEC11AP67812 179 aa9.23□□□□□ -0.93
SMIM11A-203ENST00000399299 ALKBH7Q9BT30 221 aaPredicted RBP9.23□□□□□ -0.93
SMIM11A-203ENST00000399299 SPINK6Q6UWN8 80 aa9.22□□□□□ -0.93
SMIM11A-203ENST00000399299 ERASQ7Z444 233 aa9.22□□□□□ -0.93
SMIM11A-203ENST00000399299 HERVK_113P63121 156 aa9.21□□□□□ -0.94
SMIM11A-203ENST00000399299 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMIM11A-203ENST00000399299 C2orf82Q6UX34 121 aa9.2□□□□□ -0.94
SMIM11A-203ENST00000399299 SCGB3A1Q96QR1 104 aa9.2□□□□□ -0.94
SMIM11A-203ENST00000399299 RPS10P5Q9NQ39 176 aa9.2□□□□□ -0.94
SMIM11A-203ENST00000399299 Q8IZM0 81 aa9.19□□□□□ -0.94
SMIM11A-203ENST00000399299 PACRGQ96M98 296 aaPredicted RBP9.19□□□□□ -0.94
SMIM11A-203ENST00000399299 MRPL18Q9H0U6 180 aaKnown RBP9.19□□□□□ -0.94
SMIM11A-203ENST00000399299 NDUFC2-KCTD14E9PQ53 114 aa9.18□□□□□ -0.94
SMIM11A-203ENST00000399299 PRSS2P07478 247 aa9.18□□□□□ -0.94
SMIM11A-203ENST00000399299 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
SMIM11A-203ENST00000399299 LINC01600Q96MT4 127 aa9.18□□□□□ -0.94
SMIM11A-203ENST00000399299 GEMIN7Q9H840 131 aaKnown RBP9.18□□□□□ -0.94
SMIM11A-203ENST00000399299 CDKN2A-AS1Q9UH64 79 aa9.18□□□□□ -0.94
SMIM11A-203ENST00000399299 PSORS1C2Q9UIG4 136 aa9.18□□□□□ -0.94
SMIM11A-203ENST00000399299 FABP9Q0Z7S8 132 aa9.17□□□□□ -0.94
SMIM11A-203ENST00000399299 REG3GQ6UW15 175 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms