RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 COX7A2LO14548 114 aa10.05□□□□□ -0.8
CXCL12-206ENST00000395795 HBBP68871 147 aa10.05□□□□□ -0.8
CXCL12-206ENST00000395795 C5orf38Q86SI9 138 aa10.05□□□□□ -0.8
CXCL12-206ENST00000395795 C7orf33Q8WU49 177 aa10.05□□□□□ -0.8
CXCL12-206ENST00000395795 ZNF561-AS1K7EIQ3 104 aa10.04□□□□□ -0.8
CXCL12-206ENST00000395795 PTTG1IPP53801 180 aa10.04□□□□□ -0.8
CXCL12-206ENST00000395795 IGHV3OR16-9A0A0B4J2B5 98 aa10.03□□□□□ -0.8
CXCL12-206ENST00000395795 A0A1W2PNN7 141 aa10.03□□□□□ -0.8
CXCL12-206ENST00000395795 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.03□□□□□ -0.8
CXCL12-206ENST00000395795 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
CXCL12-206ENST00000395795 LINC00474Q9P2X8 69 aa10.03□□□□□ -0.8
CXCL12-206ENST00000395795 PLA2G2DQ9UNK4 145 aa10.03□□□□□ -0.8
CXCL12-206ENST00000395795 TCAPO15273 167 aa10.02□□□□□ -0.81
CXCL12-206ENST00000395795 MRPS36P82909 103 aaKnown RBP10.02□□□□□ -0.81
CXCL12-206ENST00000395795 C2orf48Q96LS8 159 aa10.02□□□□□ -0.81
CXCL12-206ENST00000395795 MALP21145 153 aa10.01□□□□□ -0.81
CXCL12-206ENST00000395795 S100A1P23297 94 aa10.01□□□□□ -0.81
CXCL12-206ENST00000395795 ODF1Q14990 250 aa10.01□□□□□ -0.81
CXCL12-206ENST00000395795 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
CXCL12-206ENST00000395795 SMCO4Q9NRQ5 59 aa10.01□□□□□ -0.81
CXCL12-206ENST00000395795 SPANXA1Q9NS26 97 aa10.01□□□□□ -0.81
CXCL12-206ENST00000395795 LOC107984640A0A0U1RRK4 108 aa10□□□□□ -0.81
CXCL12-206ENST00000395795 PRSS47A8MTI9 375 aa10□□□□□ -0.81
CXCL12-206ENST00000395795 COX19Q49B96 90 aa10□□□□□ -0.81
CXCL12-206ENST00000395795 TMEM18Q96B42 140 aa10□□□□□ -0.81
CXCL12-206ENST00000395795 APOMO95445 188 aa9.99□□□□□ -0.81
CXCL12-206ENST00000395795 PPBPP02775 128 aa9.99□□□□□ -0.81
CXCL12-206ENST00000395795 SMAGPQ0VAQ4 97 aa9.99□□□□□ -0.81
CXCL12-206ENST00000395795 GAGE2BQ13066 116 aa9.99□□□□□ -0.81
CXCL12-206ENST00000395795 CAMK2N2Q96S95 79 aa9.99□□□□□ -0.81
CXCL12-206ENST00000395795 PKIGQ9Y2B9 76 aa9.99□□□□□ -0.81
CXCL12-206ENST00000395795 UBR4Q5T4S7 5183 aa9.99□□□□□ -0.81
CXCL12-206ENST00000395795 A0A0J9YXV3 536 aa9.98□□□□□ -0.81
CXCL12-206ENST00000395795 ATP6V1G1O75348 118 aa9.98□□□□□ -0.81
CXCL12-206ENST00000395795 SPAG11BQ08648 103 aa9.98□□□□□ -0.81
CXCL12-206ENST00000395795 C10orf25Q5T742 122 aa9.98□□□□□ -0.81
CXCL12-206ENST00000395795 TMEM136Q6ZRR5 245 aa9.98□□□□□ -0.81
CXCL12-206ENST00000395795 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
CXCL12-206ENST00000395795 TGIF2-C20orf24A0A0A6YYL0 155 aa9.97□□□□□ -0.81
CXCL12-206ENST00000395795 KRTAP10-8P60410 259 aa9.97□□□□□ -0.81
CXCL12-206ENST00000395795 RNF151Q2KHN1 245 aa9.97□□□□□ -0.81
CXCL12-206ENST00000395795 OR10D4PQ8NGN7 298 aa9.97□□□□□ -0.81
CXCL12-206ENST00000395795 PRELID3AQ96N28 172 aa9.97□□□□□ -0.81
CXCL12-206ENST00000395795 GNB1LQ9BYB4 327 aa9.97□□□□□ -0.81
CXCL12-206ENST00000395795 KIAA0087Q14695 138 aa9.96□□□□□ -0.82
CXCL12-206ENST00000395795 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
CXCL12-206ENST00000395795 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.82
CXCL12-206ENST00000395795 CBLN2Q8IUK8 224 aa9.96□□□□□ -0.82
CXCL12-206ENST00000395795 PYGO1Q9Y3Y4 419 aa9.96□□□□□ -0.82
CXCL12-206ENST00000395795 IGLV4-3A0A075B6K6 122 aa9.95□□□□□ -0.82
CXCL12-206ENST00000395795 LINC00242Q5T6M2 205 aa9.95□□□□□ -0.82
CXCL12-206ENST00000395795 Q6ZRP5 223 aa9.95□□□□□ -0.82
CXCL12-206ENST00000395795 KRTAP11-1Q8IUC1 163 aa9.95□□□□□ -0.82
CXCL12-206ENST00000395795 KRTAP7-1Q8IUC3 87 aa9.95□□□□□ -0.82
CXCL12-206ENST00000395795 ORAOV1Q8WV07 137 aa9.95□□□□□ -0.82
CXCL12-206ENST00000395795 YPEL4Q96NS1 127 aa9.95□□□□□ -0.82
CXCL12-206ENST00000395795 MRPL35Q9NZE8 188 aaKnown RBP9.95□□□□□ -0.82
CXCL12-206ENST00000395795 IFITM10A6NMD0 228 aa9.94□□□□□ -0.82
CXCL12-206ENST00000395795 MT-ND6P03923 174 aa9.94□□□□□ -0.82
CXCL12-206ENST00000395795 LINC00173Q6ZV60 143 aa9.94□□□□□ -0.82
CXCL12-206ENST00000395795 A0A087WZ39 114 aa9.93□□□□□ -0.82
CXCL12-206ENST00000395795 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
CXCL12-206ENST00000395795 UNQ6190/PRO20217Q6UXQ8 127 aa9.93□□□□□ -0.82
CXCL12-206ENST00000395795 C6orf48Q9UBA6 75 aa9.93□□□□□ -0.82
CXCL12-206ENST00000395795 TLX1NBP0CAT3 122 aa9.92□□□□□ -0.82
CXCL12-206ENST00000395795 RPL18AQ02543 176 aaKnown RBP9.92□□□□□ -0.82
CXCL12-206ENST00000395795 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
CXCL12-206ENST00000395795 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
CXCL12-206ENST00000395795 LAMTOR2Q9Y2Q5 125 aa9.92□□□□□ -0.82
CXCL12-206ENST00000395795 TRAPPC1Q9Y5R8 145 aa9.92□□□□□ -0.82
CXCL12-206ENST00000395795 FAM168BA1KXE4 195 aa9.91□□□□□ -0.82
CXCL12-206ENST00000395795 F8WDY8 70 aa9.91□□□□□ -0.82
CXCL12-206ENST00000395795 MRPL18Q9H0U6 180 aaKnown RBP9.91□□□□□ -0.82
CXCL12-206ENST00000395795 LOC389332A0A1B0GUA5 103 aa9.9□□□□□ -0.82
CXCL12-206ENST00000395795 SCO1O75880 301 aa9.9□□□□□ -0.82
CXCL12-206ENST00000395795 IFI27P40305 119 aaPredicted RBP9.9□□□□□ -0.82
CXCL12-206ENST00000395795 UBE2D1P51668 147 aa9.9□□□□□ -0.82
CXCL12-206ENST00000395795 FABP9Q0Z7S8 132 aa9.9□□□□□ -0.82
CXCL12-206ENST00000395795 Q8N8P6 123 aa9.9□□□□□ -0.82
CXCL12-206ENST00000395795 AMELXQ99217 191 aa9.9□□□□□ -0.82
CXCL12-206ENST00000395795 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
CXCL12-206ENST00000395795 RAB5AP20339 215 aa9.89□□□□□ -0.83
CXCL12-206ENST00000395795 TMEM141Q96I45 108 aa9.89□□□□□ -0.83
CXCL12-206ENST00000395795 LRP2P98164 4655 aa9.89□□□□□ -0.83
CXCL12-206ENST00000395795 COLCA2A8K830 154 aa9.88□□□□□ -0.83
CXCL12-206ENST00000395795 NDUFA1O15239 70 aa9.88□□□□□ -0.83
CXCL12-206ENST00000395795 KIAA1644Q3SXP7 199 aa9.88□□□□□ -0.83
CXCL12-206ENST00000395795 C2orf66Q6UXQ4 117 aa9.88□□□□□ -0.83
CXCL12-206ENST00000395795 MAP1LC3AQ9H492 121 aa9.88□□□□□ -0.83
CXCL12-206ENST00000395795 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
CXCL12-206ENST00000395795 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
CXCL12-206ENST00000395795 REG3GQ6UW15 175 aa9.86□□□□□ -0.83
CXCL12-206ENST00000395795 LINC01561Q8N1V8 128 aa9.85□□□□□ -0.83
CXCL12-206ENST00000395795 ALKBH7Q9BT30 221 aaPredicted RBP9.85□□□□□ -0.83
CXCL12-206ENST00000395795 CYSLTR1Q9Y271 337 aa9.85□□□□□ -0.83
CXCL12-206ENST00000395795 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
CXCL12-206ENST00000395795 TEX43Q6ZNM6 134 aa9.84□□□□□ -0.83
CXCL12-206ENST00000395795 NPSP0C0P6 89 aa9.83□□□□□ -0.84
CXCL12-206ENST00000395795 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
CXCL12-206ENST00000395795 C1orf137Q5JT78 98 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms