RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ZNF664Q8N3J9 261 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 C20orf78Q9BR46 151 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 CDC42SE2Q9NRR3 84 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 TMEM242Q9NWH2 141 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 A0A087WYN8 130 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 IGHV1-58A0A0C4DH39 117 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 A0A1B0GVG6 124 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 A0A1B0GXF2 115 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 C9JQL5 133 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 S100A8P05109 93 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 PEA15Q15121 130 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 SS18Q15532 418 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 ADIRFQ15847 76 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 Q6ZRU5 148 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 KIR2DL4Q99706 377 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 LINC00474Q9P2X8 69 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 UBE2D4Q9Y2X8 147 aa3.87□□□□□ -1.79
PTPN20-208ENST00000395727 C1orf196B1AJZ1 125 aa3.86□□□□□ -1.79
PTPN20-208ENST00000395727 F8W036 122 aa3.86□□□□□ -1.79
PTPN20-208ENST00000395727 PPBPP02775 128 aa3.86□□□□□ -1.79
PTPN20-208ENST00000395727 FCER1GP30273 86 aa3.86□□□□□ -1.79
PTPN20-208ENST00000395727 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
PTPN20-208ENST00000395727 ATP5L2Q7Z4Y8 100 aa3.86□□□□□ -1.79
PTPN20-208ENST00000395727 IGKV3OR2-268A0A0C4DH90 116 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 F8WDY8 70 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 XCL1P47992 114 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 HNRNPA3P51991 378 aaKnown RBP3.85□□□□□ -1.79
PTPN20-208ENST00000395727 HBBP68871 147 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 MRPS36P82909 103 aaKnown RBP3.85□□□□□ -1.79
PTPN20-208ENST00000395727 COX6A2Q02221 97 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 PNRC1Q12796 327 aaPredicted RBP3.85□□□□□ -1.79
PTPN20-208ENST00000395727 HIGD2BQ4VC39 106 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 PAPPA-AS1Q5QFB9 102 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 C7orf33Q8WU49 177 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 C2orf48Q96LS8 159 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 SMIM2Q9BVW6 85 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 SPANXA1Q9NS26 97 aa3.85□□□□□ -1.79
PTPN20-208ENST00000395727 A0A096LNI7 61 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 PRSS47A8MTI9 375 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 SMKR1H3BMG3 65 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 CHTF8P0CG12 524 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 CKS2P33552 79 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 CAMPP49913 170 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 SYCNQ0VAF6 134 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 OR10D4PQ8NGN7 298 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 CARD19Q96LW7 228 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 LAMTOR2Q9Y2Q5 125 aa3.84□□□□□ -1.79
PTPN20-208ENST00000395727 IGLV4-69A0A075B6H9 119 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 IGHV3OR16-9A0A0B4J2B5 98 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 COX7A2LO14548 114 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 APOMO95445 188 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 MT1HL1P0DM35 61 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
PTPN20-208ENST00000395727 PRR3P79522 188 aaKnown RBP3.83□□□□□ -1.8
PTPN20-208ENST00000395727 Q6ZUT4 128 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 ORMDL3Q8N138 153 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 STPG4Q8N801 248 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 FAM104AQ969W3 186 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 PYGO1Q9Y3Y4 419 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 HERC1Q15751 4861 aa3.83□□□□□ -1.8
PTPN20-208ENST00000395727 LOC107984640A0A0U1RRK4 108 aa3.82□□□□□ -1.8
PTPN20-208ENST00000395727 D6R8Y8 96 aa3.82□□□□□ -1.8
PTPN20-208ENST00000395727 K7EMI3 77 aa3.82□□□□□ -1.8
PTPN20-208ENST00000395727 NPYP01303 97 aa3.82□□□□□ -1.8
PTPN20-208ENST00000395727 MAJINQ3KP22 176 aa3.82□□□□□ -1.8
PTPN20-208ENST00000395727 MRPL54Q6P161 138 aaKnown RBP3.82□□□□□ -1.8
PTPN20-208ENST00000395727 IGKV2-24A0A0C4DH68 120 aa3.81□□□□□ -1.8
PTPN20-208ENST00000395727 TLX1NBP0CAT3 122 aa3.81□□□□□ -1.8
PTPN20-208ENST00000395727 RPL39P62891 51 aaKnown RBP3.81□□□□□ -1.8
PTPN20-208ENST00000395727 CLLU1Q5K131 121 aa3.81□□□□□ -1.8
PTPN20-208ENST00000395727 LINC01561Q8N1V8 128 aa3.81□□□□□ -1.8
PTPN20-208ENST00000395727 DPH3Q96FX2 82 aa3.81□□□□□ -1.8
PTPN20-208ENST00000395727 CAMK2N2Q96S95 79 aa3.81□□□□□ -1.8
PTPN20-208ENST00000395727 MRPL35Q9NZE8 188 aaKnown RBP3.81□□□□□ -1.8
PTPN20-208ENST00000395727 TRAV13-1A0A0B4J241 112 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.8□□□□□ -1.8
PTPN20-208ENST00000395727 MT-ND4LP03901 98 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 IFI27P40305 119 aaPredicted RBP3.8□□□□□ -1.8
PTPN20-208ENST00000395727 SPAG11BQ08648 103 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 RNASE13Q5GAN3 156 aaKnown RBP3.8□□□□□ -1.8
PTPN20-208ENST00000395727 SPINK6Q6UWN8 80 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 Q6ZRP5 223 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 TMEM136Q6ZRR5 245 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 FAM19A3Q7Z5A8 133 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 LINC00526Q96FQ7 95 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 LINC01600Q96MT4 127 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 PRELID3AQ96N28 172 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 IMMP2LQ96T52 175 aa3.8□□□□□ -1.8
PTPN20-208ENST00000395727 IGLV4-3A0A075B6K6 122 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 TRAV9-1A0A075B6T8 112 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 A0A087WZ39 114 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 IFITM10A6NMD0 228 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 RAB5AP20339 215 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 RAB14P61106 215 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 SRSF9Q13242 221 aaKnown RBP eCLIP3.79□□□□□ -1.8
PTPN20-208ENST00000395727 ORMDL2Q53FV1 153 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 UQCC3Q6UW78 93 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 C5orf38Q86SI9 138 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 Q8N8P6 123 aa3.79□□□□□ -1.8
PTPN20-208ENST00000395727 MAP1LC3AQ9H492 121 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms