RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 RPL18AQ02543 176 aaKnown RBP10.25□□□□□ -0.77
PTPRK-208ENST00000392449 SMAGPQ0VAQ4 97 aa10.25□□□□□ -0.77
PTPRK-208ENST00000392449 PEA15Q15121 130 aa10.25□□□□□ -0.77
PTPRK-208ENST00000392449 LRP2P98164 4655 aa10.24□□□□□ -0.77
PTPRK-208ENST00000392449 A0A1B0GXF2 115 aa10.24□□□□□ -0.77
PTPRK-208ENST00000392449 HBBP68871 147 aa10.24□□□□□ -0.77
PTPRK-208ENST00000392449 SRSF9Q13242 221 aaKnown RBP eCLIP10.24□□□□□ -0.77
PTPRK-208ENST00000392449 SPINK6Q6UWN8 80 aa10.24□□□□□ -0.77
PTPRK-208ENST00000392449 Q6ZRP5 223 aa10.24□□□□□ -0.77
PTPRK-208ENST00000392449 TMEM18Q96B42 140 aa10.24□□□□□ -0.77
PTPRK-208ENST00000392449 A0A1B0GW15 77 aa10.23□□□□□ -0.77
PTPRK-208ENST00000392449 RPL32P62910 135 aaKnown RBP10.23□□□□□ -0.77
PTPRK-208ENST00000392449 C9orf116Q5BN46 136 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-208ENST00000392449 C2orf48Q96LS8 159 aa10.23□□□□□ -0.77
PTPRK-208ENST00000392449 ORAOV1Q8WV07 137 aa10.23□□□□□ -0.77
PTPRK-208ENST00000392449 IGHV3OR16-9A0A0B4J2B5 98 aa10.21□□□□□ -0.78
PTPRK-208ENST00000392449 F8W036 122 aa10.21□□□□□ -0.78
PTPRK-208ENST00000392449 KRTAP10-8P60410 259 aa10.21□□□□□ -0.78
PTPRK-208ENST00000392449 C10orf25Q5T742 122 aa10.21□□□□□ -0.78
PTPRK-208ENST00000392449 PHF5AQ7RTV0 110 aaKnown RBP10.21□□□□□ -0.78
PTPRK-208ENST00000392449 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.78
PTPRK-208ENST00000392449 IFITM10A6NMD0 228 aa10.2□□□□□ -0.78
PTPRK-208ENST00000392449 REG3GQ6UW15 175 aa10.2□□□□□ -0.78
PTPRK-208ENST00000392449 OR10D4PQ8NGN7 298 aa10.2□□□□□ -0.78
PTPRK-208ENST00000392449 PSORS1C2Q9UIG4 136 aa10.2□□□□□ -0.78
PTPRK-208ENST00000392449 FAM168BA1KXE4 195 aa10.19□□□□□ -0.78
PTPRK-208ENST00000392449 S100A8P05109 93 aa10.19□□□□□ -0.78
PTPRK-208ENST00000392449 MRPS36P82909 103 aaKnown RBP10.18□□□□□ -0.78
PTPRK-208ENST00000392449 UNQ6190/PRO20217Q6UXQ8 127 aa10.18□□□□□ -0.78
PTPRK-208ENST00000392449 SMDT1Q9H4I9 107 aa10.18□□□□□ -0.78
PTPRK-208ENST00000392449 MT-ND6P03923 174 aa10.17□□□□□ -0.78
PTPRK-208ENST00000392449 ORMDL3Q8N138 153 aa10.17□□□□□ -0.78
PTPRK-208ENST00000392449 PRELID3AQ96N28 172 aa10.17□□□□□ -0.78
PTPRK-208ENST00000392449 RNF213Q63HN8 5207 aa10.17□□□□□ -0.78
PTPRK-208ENST00000392449 PPBPP02775 128 aa10.17□□□□□ -0.78
PTPRK-208ENST00000392449 RNF151Q2KHN1 245 aa10.17□□□□□ -0.78
PTPRK-208ENST00000392449 TMEM136Q6ZRR5 245 aa10.17□□□□□ -0.78
PTPRK-208ENST00000392449 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
PTPRK-208ENST00000392449 MRPL35Q9NZE8 188 aaKnown RBP10.17□□□□□ -0.78
PTPRK-208ENST00000392449 C6orf48Q9UBA6 75 aa10.17□□□□□ -0.78
PTPRK-208ENST00000392449 IGLV4-3A0A075B6K6 122 aa10.16□□□□□ -0.78
PTPRK-208ENST00000392449 LOC389332A0A1B0GUA5 103 aa10.16□□□□□ -0.78
PTPRK-208ENST00000392449 C1orf137Q5JT78 98 aa10.16□□□□□ -0.78
PTPRK-208ENST00000392449 ZC2HC1BQ5TFG8 222 aa10.16□□□□□ -0.78
PTPRK-208ENST00000392449 NDUFA1O15239 70 aa10.15□□□□□ -0.78
PTPRK-208ENST00000392449 RAB5AP20339 215 aa10.15□□□□□ -0.78
PTPRK-208ENST00000392449 IFI27P40305 119 aaPredicted RBP10.14□□□□□ -0.79
PTPRK-208ENST00000392449 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
PTPRK-208ENST00000392449 ATP5L2Q7Z4Y8 100 aa10.14□□□□□ -0.79
PTPRK-208ENST00000392449 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
PTPRK-208ENST00000392449 TGIF2-C20orf24A0A0A6YYL0 155 aa10.13□□□□□ -0.79
PTPRK-208ENST00000392449 KIAA0087Q14695 138 aa10.13□□□□□ -0.79
PTPRK-208ENST00000392449 GAGE2EQ4V326 116 aa10.13□□□□□ -0.79
PTPRK-208ENST00000392449 GAGE2DQ9UEU5 116 aa10.13□□□□□ -0.79
PTPRK-208ENST00000392449 A0A087WZ39 114 aa10.12□□□□□ -0.79
PTPRK-208ENST00000392449 C2orf82Q6UX34 121 aa10.12□□□□□ -0.79
PTPRK-208ENST00000392449 KRTAP7-1Q8IUC3 87 aa10.12□□□□□ -0.79
PTPRK-208ENST00000392449 IMMP2LQ96T52 175 aa10.12□□□□□ -0.79
PTPRK-208ENST00000392449 TMEM141Q96I45 108 aa10.11□□□□□ -0.79
PTPRK-208ENST00000392449 PYGO1Q9Y3Y4 419 aa10.11□□□□□ -0.79
PTPRK-208ENST00000392449 F8WDY8 70 aa10.1□□□□□ -0.79
PTPRK-208ENST00000392449 TLX1NBP0CAT3 122 aa10.1□□□□□ -0.79
PTPRK-208ENST00000392449 LINC00173Q6ZV60 143 aa10.1□□□□□ -0.79
PTPRK-208ENST00000392449 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
PTPRK-208ENST00000392449 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
PTPRK-208ENST00000392449 IGLV7-43P04211 117 aa10.09□□□□□ -0.79
PTPRK-208ENST00000392449 UBE2D1P51668 147 aa10.09□□□□□ -0.79
PTPRK-208ENST00000392449 TEX43Q6ZNM6 134 aa10.09□□□□□ -0.79
PTPRK-208ENST00000392449 C2orf66Q6UXQ4 117 aa10.08□□□□□ -0.8
PTPRK-208ENST00000392449 Q8N8P6 123 aa10.07□□□□□ -0.8
PTPRK-208ENST00000392449 CYSLTR1Q9Y271 337 aa10.07□□□□□ -0.8
PTPRK-208ENST00000392449 M0QXV9 152 aa10.06□□□□□ -0.8
PTPRK-208ENST00000392449 C9orf129Q5T035 196 aaKnown RBP10.06□□□□□ -0.8
PTPRK-208ENST00000392449 PRR26Q8N8Z3 221 aa10.06□□□□□ -0.8
PTPRK-208ENST00000392449 LAMTOR2Q9Y2Q5 125 aa10.06□□□□□ -0.8
PTPRK-208ENST00000392449 MT-ND4LP03901 98 aa10.05□□□□□ -0.8
PTPRK-208ENST00000392449 PNRC1Q12796 327 aaPredicted RBP10.05□□□□□ -0.8
PTPRK-208ENST00000392449 ANAPC16Q96DE5 110 aa10.05□□□□□ -0.8
PTPRK-208ENST00000392449 AMELXQ99217 191 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 C2orf88Q9BSF0 95 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 TOMM7Q9P0U1 55 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 LPAP08519 4548 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 TRBV30A0A0K0K1B3 111 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 IGIPA6NJ69 53 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 NDUFC2-KCTD14E9PQ53 114 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 Q6ZN92 141 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 DIRC1Q969H9 104 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 VCX2Q9H322 139 aa10.04□□□□□ -0.8
PTPRK-208ENST00000392449 H0Y9J4 135 aa10.03□□□□□ -0.8
PTPRK-208ENST00000392449 UBE2BP63146 152 aa10.03□□□□□ -0.8
PTPRK-208ENST00000392449 LINC00469Q8N7U9 141 aa10.03□□□□□ -0.8
PTPRK-208ENST00000392449 PACRGQ96M98 296 aaPredicted RBP10.03□□□□□ -0.8
PTPRK-208ENST00000392449 KIAA1644Q3SXP7 199 aa10.02□□□□□ -0.81
PTPRK-208ENST00000392449 ORMDL2Q53FV1 153 aa10.02□□□□□ -0.81
PTPRK-208ENST00000392449 CTDSP1Q9GZU7 261 aa10.01□□□□□ -0.81
PTPRK-208ENST00000392449 LOC100996750A0A140TA64 210 aa10□□□□□ -0.81
PTPRK-208ENST00000392449 PRSS2P07478 247 aa10□□□□□ -0.81
PTPRK-208ENST00000392449 RAB14P61106 215 aa10□□□□□ -0.81
PTPRK-208ENST00000392449 LINC01561Q8N1V8 128 aa10□□□□□ -0.81
PTPRK-208ENST00000392449 KRTAP4-6Q9BYQ5 205 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms