RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CFAP161Q6P656 301 aa6.02□□□□□ -1.45
HMGN1-202ENST00000380747 Q6ZUT4 128 aa6.02□□□□□ -1.45
HMGN1-202ENST00000380747 Q8N8P6 123 aa6.02□□□□□ -1.45
HMGN1-202ENST00000380747 TIMM21Q9BVV7 248 aa6.02□□□□□ -1.45
HMGN1-202ENST00000380747 GNB1LQ9BYB4 327 aa6.02□□□□□ -1.45
HMGN1-202ENST00000380747 CSDC2Q9Y534 153 aaKnown RBP6.02□□□□□ -1.45
HMGN1-202ENST00000380747 TGIF2-C20orf24A0A0A6YYL0 155 aa6.01□□□□□ -1.45
HMGN1-202ENST00000380747 TRAV13-1A0A0B4J241 112 aa6.01□□□□□ -1.45
HMGN1-202ENST00000380747 FABP9Q0Z7S8 132 aa6.01□□□□□ -1.45
HMGN1-202ENST00000380747 FOXI1Q12951 378 aa6.01□□□□□ -1.45
HMGN1-202ENST00000380747 COX19Q49B96 90 aa6.01□□□□□ -1.45
HMGN1-202ENST00000380747 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
HMGN1-202ENST00000380747 SPANXA1Q9NS26 97 aa6.01□□□□□ -1.45
HMGN1-202ENST00000380747 MT-ND6P03923 174 aa6□□□□□ -1.45
HMGN1-202ENST00000380747 IFI27P40305 119 aaPredicted RBP6□□□□□ -1.45
HMGN1-202ENST00000380747 XGP55808 180 aa6□□□□□ -1.45
HMGN1-202ENST00000380747 HIGD2BQ4VC39 106 aa6□□□□□ -1.45
HMGN1-202ENST00000380747 OPRPNQ99935 248 aaPredicted RBP6□□□□□ -1.45
HMGN1-202ENST00000380747 NXT2Q9NPJ8 142 aaKnown RBP6□□□□□ -1.45
HMGN1-202ENST00000380747 DNAH8Q96JB1 4490 aa6□□□□□ -1.45
HMGN1-202ENST00000380747 C1orf196B1AJZ1 125 aa5.99□□□□□ -1.45
HMGN1-202ENST00000380747 ORMDL2Q53FV1 153 aa5.99□□□□□ -1.45
HMGN1-202ENST00000380747 CD164L2Q6UWJ8 174 aa5.99□□□□□ -1.45
HMGN1-202ENST00000380747 C2orf66Q6UXQ4 117 aa5.99□□□□□ -1.45
HMGN1-202ENST00000380747 SLC7A5P1Q8MH63 180 aa5.99□□□□□ -1.45
HMGN1-202ENST00000380747 C15orf56Q8N910 161 aa5.99□□□□□ -1.45
HMGN1-202ENST00000380747 PRSS3P2Q8NHM4 247 aa5.99□□□□□ -1.45
HMGN1-202ENST00000380747 ALKBH7Q9BT30 221 aaPredicted RBP5.99□□□□□ -1.45
HMGN1-202ENST00000380747 CYSLTR1Q9Y271 337 aa5.99□□□□□ -1.45
HMGN1-202ENST00000380747 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.98□□□□□ -1.45
HMGN1-202ENST00000380747 IGHV1-58A0A0C4DH39 117 aa5.98□□□□□ -1.45
HMGN1-202ENST00000380747 IFITM10A6NMD0 228 aa5.98□□□□□ -1.45
HMGN1-202ENST00000380747 K7EMI3 77 aa5.98□□□□□ -1.45
HMGN1-202ENST00000380747 MRPS36P82909 103 aaKnown RBP5.98□□□□□ -1.45
HMGN1-202ENST00000380747 Q5VSD8 79 aa5.98□□□□□ -1.45
HMGN1-202ENST00000380747 TRAPPC1Q9Y5R8 145 aa5.98□□□□□ -1.45
HMGN1-202ENST00000380747 IGLV4-3A0A075B6K6 122 aa5.97□□□□□ -1.45
HMGN1-202ENST00000380747 COX7A2LO14548 114 aa5.97□□□□□ -1.45
HMGN1-202ENST00000380747 CNBPP62633 177 aaKnown RBP5.97□□□□□ -1.45
HMGN1-202ENST00000380747 C5orf38Q86SI9 138 aa5.97□□□□□ -1.45
HMGN1-202ENST00000380747 C9orf163Q8N9P6 203 aa5.97□□□□□ -1.45
HMGN1-202ENST00000380747 FAM104AQ969W3 186 aa5.97□□□□□ -1.45
HMGN1-202ENST00000380747 TMEM141Q96I45 108 aa5.97□□□□□ -1.45
HMGN1-202ENST00000380747 PYGO1Q9Y3Y4 419 aa5.97□□□□□ -1.45
HMGN1-202ENST00000380747 GVQW2A0A096LPI5 108 aaPredicted RBP5.96□□□□□ -1.46
HMGN1-202ENST00000380747 TRIAP1O43715 76 aa5.96□□□□□ -1.46
HMGN1-202ENST00000380747 SMR3BP02814 79 aaPredicted RBP5.96□□□□□ -1.46
HMGN1-202ENST00000380747 SLPIP03973 132 aa5.96□□□□□ -1.46
HMGN1-202ENST00000380747 G0S2P27469 103 aa5.96□□□□□ -1.46
HMGN1-202ENST00000380747 Q6ZN92 141 aa5.96□□□□□ -1.46
HMGN1-202ENST00000380747 Q6ZSA8 131 aa5.96□□□□□ -1.46
HMGN1-202ENST00000380747 FA2HQ7L5A8 372 aa5.96□□□□□ -1.46
HMGN1-202ENST00000380747 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
HMGN1-202ENST00000380747 IGHV3-64A0A075B6Q5 118 aa5.95□□□□□ -1.46
HMGN1-202ENST00000380747 TEX43Q6ZNM6 134 aa5.95□□□□□ -1.46
HMGN1-202ENST00000380747 CBLN2Q8IUK8 224 aa5.95□□□□□ -1.46
HMGN1-202ENST00000380747 LINC00526Q96FQ7 95 aa5.95□□□□□ -1.46
HMGN1-202ENST00000380747 C2orf88Q9BSF0 95 aa5.95□□□□□ -1.46
HMGN1-202ENST00000380747 SMCO4Q9NRQ5 59 aa5.95□□□□□ -1.46
HMGN1-202ENST00000380747 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
HMGN1-202ENST00000380747 IGIPA6NJ69 53 aa5.94□□□□□ -1.46
HMGN1-202ENST00000380747 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
HMGN1-202ENST00000380747 ZC2HC1BQ5TFG8 222 aa5.94□□□□□ -1.46
HMGN1-202ENST00000380747 SCXQ7RTU7 201 aa5.94□□□□□ -1.46
HMGN1-202ENST00000380747 TOMM6Q96B49 74 aa5.94□□□□□ -1.46
HMGN1-202ENST00000380747 YPEL4Q96NS1 127 aa5.94□□□□□ -1.46
HMGN1-202ENST00000380747 CHAC1Q9BUX1 264 aa5.94□□□□□ -1.46
HMGN1-202ENST00000380747 VCX2Q9H322 139 aa5.94□□□□□ -1.46
HMGN1-202ENST00000380747 FAT3Q8TDW7 4589 aa5.94□□□□□ -1.46
HMGN1-202ENST00000380747 IGLV4-69A0A075B6H9 119 aa5.93□□□□□ -1.46
HMGN1-202ENST00000380747 APOMO95445 188 aa5.93□□□□□ -1.46
HMGN1-202ENST00000380747 PAPPA-AS1Q5QFB9 102 aa5.93□□□□□ -1.46
HMGN1-202ENST00000380747 SDIM1Q6ZPB5 146 aa5.93□□□□□ -1.46
HMGN1-202ENST00000380747 CIRBP-AS1Q8TBR5 109 aa5.93□□□□□ -1.46
HMGN1-202ENST00000380747 DPH3Q96FX2 82 aa5.93□□□□□ -1.46
HMGN1-202ENST00000380747 SCGB3A1Q96QR1 104 aa5.93□□□□□ -1.46
HMGN1-202ENST00000380747 IGHV3OR16-9A0A0B4J2B5 98 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 LINC01546A6NGU7 62 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 NPSP0C0P6 89 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 UBE2D1P51668 147 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 SPAG11BQ08648 103 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 SYCNQ0VAF6 134 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 LINC00242Q5T6M2 205 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 ERASQ7Z444 233 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 C18orf32Q8TCD1 76 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 ORAOV1Q8WV07 137 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 CARD19Q96LW7 228 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 AMELXQ99217 191 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 TIMM17AQ99595 171 aa5.92□□□□□ -1.46
HMGN1-202ENST00000380747 LINC01549A6NIU2 74 aa5.91□□□□□ -1.46
HMGN1-202ENST00000380747 PANO1I0J062 215 aa5.91□□□□□ -1.46
HMGN1-202ENST00000380747 LINC00614P0C842 121 aa5.91□□□□□ -1.46
HMGN1-202ENST00000380747 CHTF8P0CG12 524 aa5.91□□□□□ -1.46
HMGN1-202ENST00000380747 COX6A2Q02221 97 aa5.91□□□□□ -1.46
HMGN1-202ENST00000380747 LINC00173Q6ZV60 143 aa5.91□□□□□ -1.46
HMGN1-202ENST00000380747 CAMK2N2Q96S95 79 aa5.91□□□□□ -1.46
HMGN1-202ENST00000380747 IGKV2-24A0A0C4DH68 120 aa5.9□□□□□ -1.46
HMGN1-202ENST00000380747 Q6ZRU5 148 aa5.9□□□□□ -1.46
HMGN1-202ENST00000380747 OR10D4PQ8NGN7 298 aa5.9□□□□□ -1.46
HMGN1-202ENST00000380747 URB1-AS1Q96HZ7 61 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms