RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 IFITM10A6NMD0 228 aa11.98□□□□□ -0.49
CBWD3-204ENST00000377349 APOMO95445 188 aa11.98□□□□□ -0.49
CBWD3-204ENST00000377349 PPBPP02775 128 aa11.98□□□□□ -0.49
CBWD3-204ENST00000377349 RPL32P62910 135 aaKnown RBP11.98□□□□□ -0.49
CBWD3-204ENST00000377349 PRR3P79522 188 aaKnown RBP11.98□□□□□ -0.49
CBWD3-204ENST00000377349 SPAG11BQ08648 103 aa11.98□□□□□ -0.49
CBWD3-204ENST00000377349 ODF1Q14990 250 aa11.98□□□□□ -0.49
CBWD3-204ENST00000377349 LINC01600Q96MT4 127 aa11.98□□□□□ -0.49
CBWD3-204ENST00000377349 RPL18AQ02543 176 aaKnown RBP11.97□□□□□ -0.49
CBWD3-204ENST00000377349 ATP5L2Q7Z4Y8 100 aa11.97□□□□□ -0.49
CBWD3-204ENST00000377349 SPANXA1Q9NS26 97 aa11.97□□□□□ -0.49
CBWD3-204ENST00000377349 LOC107984640A0A0U1RRK4 108 aa11.96□□□□□ -0.49
CBWD3-204ENST00000377349 MT-ND4LP03901 98 aa11.95□□□□□ -0.5
CBWD3-204ENST00000377349 A0A0J9YXV3 536 aa11.94□□□□□ -0.5
CBWD3-204ENST00000377349 PTTG1IPP53801 180 aa11.94□□□□□ -0.5
CBWD3-204ENST00000377349 PNRC1Q12796 327 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-204ENST00000377349 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
CBWD3-204ENST00000377349 IFI27P40305 119 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-204ENST00000377349 ANAPC16Q96DE5 110 aa11.93□□□□□ -0.5
CBWD3-204ENST00000377349 MAP1LC3AQ9H492 121 aa11.93□□□□□ -0.5
CBWD3-204ENST00000377349 MRPS36P82909 103 aaKnown RBP11.91□□□□□ -0.5
CBWD3-204ENST00000377349 C2orf48Q96LS8 159 aa11.91□□□□□ -0.5
CBWD3-204ENST00000377349 TGIF2-C20orf24A0A0A6YYL0 155 aa11.9□□□□□ -0.5
CBWD3-204ENST00000377349 OR10D4PQ8NGN7 298 aa11.9□□□□□ -0.5
CBWD3-204ENST00000377349 FAM104AQ969W3 186 aa11.9□□□□□ -0.5
CBWD3-204ENST00000377349 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-204ENST00000377349 KRTAP10-8P60410 259 aa11.89□□□□□ -0.51
CBWD3-204ENST00000377349 IGLV4-3A0A075B6K6 122 aa11.87□□□□□ -0.51
CBWD3-204ENST00000377349 NDUFA1O15239 70 aa11.87□□□□□ -0.51
CBWD3-204ENST00000377349 TMEM141Q96I45 108 aa11.87□□□□□ -0.51
CBWD3-204ENST00000377349 IGHV3OR16-9A0A0B4J2B5 98 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 A0A1W2PNN7 141 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 SRSF9Q13242 221 aaKnown RBP eCLIP11.86□□□□□ -0.51
CBWD3-204ENST00000377349 SPINK6Q6UWN8 80 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 TEX43Q6ZNM6 134 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 Q6ZRP5 223 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 CTDSP1Q9GZU7 261 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 LAMTOR2Q9Y2Q5 125 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 C9orf116Q5BN46 136 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-204ENST00000377349 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 Q6ZN92 141 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 Q8N8P6 123 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 C2orf88Q9BSF0 95 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 CYSLTR1Q9Y271 337 aa11.86□□□□□ -0.51
CBWD3-204ENST00000377349 LPAP08519 4548 aa11.85□□□□□ -0.51
CBWD3-204ENST00000377349 CLLU1Q5K131 121 aa11.85□□□□□ -0.51
CBWD3-204ENST00000377349 C2orf66Q6UXQ4 117 aa11.85□□□□□ -0.51
CBWD3-204ENST00000377349 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
CBWD3-204ENST00000377349 UNQ6190/PRO20217Q6UXQ8 127 aa11.84□□□□□ -0.51
CBWD3-204ENST00000377349 PYGO1Q9Y3Y4 419 aa11.84□□□□□ -0.51
CBWD3-204ENST00000377349 GAGE2EQ4V326 116 aa11.83□□□□□ -0.52
CBWD3-204ENST00000377349 LINC00242Q5T6M2 205 aa11.83□□□□□ -0.52
CBWD3-204ENST00000377349 MRPL35Q9NZE8 188 aaKnown RBP11.83□□□□□ -0.52
CBWD3-204ENST00000377349 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.52
CBWD3-204ENST00000377349 MT-ND6P03923 174 aa11.82□□□□□ -0.52
CBWD3-204ENST00000377349 KIAA1644Q3SXP7 199 aa11.82□□□□□ -0.52
CBWD3-204ENST00000377349 ORMDL2Q53FV1 153 aa11.82□□□□□ -0.52
CBWD3-204ENST00000377349 PHF5AQ7RTV0 110 aaKnown RBP11.82□□□□□ -0.52
CBWD3-204ENST00000377349 IMMP2LQ96T52 175 aa11.82□□□□□ -0.52
CBWD3-204ENST00000377349 RNF151Q2KHN1 245 aa11.81□□□□□ -0.52
CBWD3-204ENST00000377349 VCX2Q9H322 139 aa11.81□□□□□ -0.52
CBWD3-204ENST00000377349 C6orf48Q9UBA6 75 aa11.81□□□□□ -0.52
CBWD3-204ENST00000377349 A0A087WZ39 114 aa11.8□□□□□ -0.52
CBWD3-204ENST00000377349 PRSS47A8MTI9 375 aa11.8□□□□□ -0.52
CBWD3-204ENST00000377349 ADCYAP1P18509 176 aa11.8□□□□□ -0.52
CBWD3-204ENST00000377349 REG3GQ6UW15 175 aa11.8□□□□□ -0.52
CBWD3-204ENST00000377349 FAM19A5Q7Z5A7 132 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-204ENST00000377349 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
CBWD3-204ENST00000377349 UBE2D1P51668 147 aa11.79□□□□□ -0.52
CBWD3-204ENST00000377349 C2orf82Q6UX34 121 aa11.79□□□□□ -0.52
CBWD3-204ENST00000377349 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
CBWD3-204ENST00000377349 F8WDY8 70 aa11.78□□□□□ -0.52
CBWD3-204ENST00000377349 C1orf137Q5JT78 98 aa11.78□□□□□ -0.52
CBWD3-204ENST00000377349 NXT2Q9NPJ8 142 aaKnown RBP11.78□□□□□ -0.52
CBWD3-204ENST00000377349 PSORS1C2Q9UIG4 136 aa11.78□□□□□ -0.52
CBWD3-204ENST00000377349 PRSS2P07478 247 aa11.77□□□□□ -0.52
CBWD3-204ENST00000377349 PACRGQ96M98 296 aaPredicted RBP11.77□□□□□ -0.52
CBWD3-204ENST00000377349 TMEM218A2RU14 115 aa11.77□□□□□ -0.53
CBWD3-204ENST00000377349 SMCPP49901 116 aaPredicted RBP11.77□□□□□ -0.53
CBWD3-204ENST00000377349 C4orf48Q5BLP8 95 aa11.77□□□□□ -0.53
CBWD3-204ENST00000377349 UQCC3Q6UW78 93 aa11.77□□□□□ -0.53
CBWD3-204ENST00000377349 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
CBWD3-204ENST00000377349 S100PP25815 95 aa11.76□□□□□ -0.53
CBWD3-204ENST00000377349 IFITM2Q01629 132 aa11.75□□□□□ -0.53
CBWD3-204ENST00000377349 KIAA0087Q14695 138 aa11.75□□□□□ -0.53
CBWD3-204ENST00000377349 K7EMI3 77 aa11.74□□□□□ -0.53
CBWD3-204ENST00000377349 CKS1BP61024 79 aa11.74□□□□□ -0.53
CBWD3-204ENST00000377349 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
CBWD3-204ENST00000377349 AMELXQ99217 191 aa11.74□□□□□ -0.53
CBWD3-204ENST00000377349 IGIPA6NJ69 53 aa11.73□□□□□ -0.53
CBWD3-204ENST00000377349 GEMIN7Q9H840 131 aaKnown RBP11.73□□□□□ -0.53
CBWD3-204ENST00000377349 TRBV30A0A0K0K1B3 111 aa11.72□□□□□ -0.53
CBWD3-204ENST00000377349 TLX1NBP0CAT3 122 aa11.72□□□□□ -0.53
CBWD3-204ENST00000377349 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
CBWD3-204ENST00000377349 G0S2P27469 103 aa11.71□□□□□ -0.53
CBWD3-204ENST00000377349 UBE2BP63146 152 aa11.71□□□□□ -0.53
CBWD3-204ENST00000377349 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.53
CBWD3-204ENST00000377349 SCGB3A1Q96QR1 104 aa11.71□□□□□ -0.53
CBWD3-204ENST00000377349 ALKBH7Q9BT30 221 aaPredicted RBP11.71□□□□□ -0.53
CBWD3-204ENST00000377349 M0QXV9 152 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms