RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 SYS1-DBNDD2H3BUS1 97 aa14.15□□□□□ -0.14
CBWD3-202ENST00000377342 FOXI1Q12951 378 aa14.15□□□□□ -0.14
CBWD3-202ENST00000377342 IGLC3P0DOY3 106 aa14.14□□□□□ -0.15
CBWD3-202ENST00000377342 CD164L2Q6UWJ8 174 aa14.14□□□□□ -0.15
CBWD3-202ENST00000377342 MRPL35Q9NZE8 188 aaKnown RBP14.14□□□□□ -0.15
CBWD3-202ENST00000377342 CHTOPQ9Y3Y2 248 aaKnown RBP14.14□□□□□ -0.15
CBWD3-202ENST00000377342 IGHV3OR16-9A0A0B4J2B5 98 aa14.13□□□□□ -0.15
CBWD3-202ENST00000377342 KRTDAPP60985 99 aa14.13□□□□□ -0.15
CBWD3-202ENST00000377342 RYR3Q15413 4870 aa14.12□□□□□ -0.15
CBWD3-202ENST00000377342 TINCRA0A1B0GVN0 87 aa14.12□□□□□ -0.15
CBWD3-202ENST00000377342 F8VRH5 84 aa14.12□□□□□ -0.15
CBWD3-202ENST00000377342 RTL8CO15255 209 aa14.12□□□□□ -0.15
CBWD3-202ENST00000377342 CHAC1Q9BUX1 264 aa14.12□□□□□ -0.15
CBWD3-202ENST00000377342 TM2D2Q9BX73 214 aa14.12□□□□□ -0.15
CBWD3-202ENST00000377342 PMCHL2Q9BQD1 86 aa14.11□□□□□ -0.15
CBWD3-202ENST00000377342 COX11Q9Y6N1 276 aa14.11□□□□□ -0.15
CBWD3-202ENST00000377342 FAT2Q9NYQ8 4349 aa14.11□□□□□ -0.15
CBWD3-202ENST00000377342 C11orf86A6NJI1 115 aa14.1□□□□□ -0.15
CBWD3-202ENST00000377342 IGLV5-45A0A087WSX0 123 aa14.1□□□□□ -0.15
CBWD3-202ENST00000377342 HERVK_113P63121 156 aa14.1□□□□□ -0.15
CBWD3-202ENST00000377342 LINC01545Q5VT33 79 aa14.1□□□□□ -0.15
CBWD3-202ENST00000377342 PET117Q6UWS5 81 aa14.1□□□□□ -0.15
CBWD3-202ENST00000377342 SEC11AP67812 179 aa14.09□□□□□ -0.15
CBWD3-202ENST00000377342 GEMIN7Q9H840 131 aaKnown RBP14.09□□□□□ -0.15
CBWD3-202ENST00000377342 CDKN2A-AS1Q9UH64 79 aa14.09□□□□□ -0.15
CBWD3-202ENST00000377342 C5orf38Q86SI9 138 aa14.08□□□□□ -0.16
CBWD3-202ENST00000377342 PSCAO43653 123 aa14.07□□□□□ -0.16
CBWD3-202ENST00000377342 WFDC2Q14508 124 aa14.07□□□□□ -0.16
CBWD3-202ENST00000377342 OR10D4PQ8NGN7 298 aa14.07□□□□□ -0.16
CBWD3-202ENST00000377342 ZNF22P17026 224 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-202ENST00000377342 LINC00469Q8N7U9 141 aa14.07□□□□□ -0.16
CBWD3-202ENST00000377342 A0A087WZ39 114 aa14.06□□□□□ -0.16
CBWD3-202ENST00000377342 COX7A2LO14548 114 aa14.06□□□□□ -0.16
CBWD3-202ENST00000377342 LRCOL1A6NCL2 159 aa14.05□□□□□ -0.16
CBWD3-202ENST00000377342 C15orf56Q8N910 161 aa14.04□□□□□ -0.16
CBWD3-202ENST00000377342 LECT2O14960 151 aa14.04□□□□□ -0.16
CBWD3-202ENST00000377342 DPM2O94777 84 aa14.04□□□□□ -0.16
CBWD3-202ENST00000377342 PLNP26678 52 aa14.03□□□□□ -0.16
CBWD3-202ENST00000377342 TNP2Q05952 138 aa14.03□□□□□ -0.16
CBWD3-202ENST00000377342 USP17L23D6RBM5 183 aa14.02□□□□□ -0.16
CBWD3-202ENST00000377342 IGKCP01834 107 aa14.01□□□□□ -0.17
CBWD3-202ENST00000377342 A0A087WTM6 91 aa14.01□□□□□ -0.17
CBWD3-202ENST00000377342 SMIM1B2RUZ4 78 aa14.01□□□□□ -0.17
CBWD3-202ENST00000377342 TMEM170BQ5T4T1 132 aa14.01□□□□□ -0.17
CBWD3-202ENST00000377342 C20orf202A1L168 122 aa14□□□□□ -0.17
CBWD3-202ENST00000377342 SPINK8P0C7L1 97 aa14□□□□□ -0.17
CBWD3-202ENST00000377342 MALP21145 153 aa14□□□□□ -0.17
CBWD3-202ENST00000377342 LINC01561Q8N1V8 128 aa14□□□□□ -0.17
CBWD3-202ENST00000377342 DNAH11Q96DT5 4516 aa13.98□□□□□ -0.17
CBWD3-202ENST00000377342 IGHV3-64A0A075B6Q5 118 aa13.98□□□□□ -0.17
CBWD3-202ENST00000377342 IGHV1-58A0A0C4DH39 117 aa13.98□□□□□ -0.17
CBWD3-202ENST00000377342 TMEM223A0PJW6 202 aa13.98□□□□□ -0.17
CBWD3-202ENST00000377342 H3BRM9 83 aa13.98□□□□□ -0.17
CBWD3-202ENST00000377342 GVQW2A0A096LPI5 108 aaPredicted RBP13.97□□□□□ -0.17
CBWD3-202ENST00000377342 HIGD2BQ4VC39 106 aa13.97□□□□□ -0.17
CBWD3-202ENST00000377342 ORAOV1Q8WV07 137 aa13.97□□□□□ -0.17
CBWD3-202ENST00000377342 IGLV5-39A0A0G2JS06 123 aa13.96□□□□□ -0.17
CBWD3-202ENST00000377342 ATOH7Q8N100 152 aa13.96□□□□□ -0.17
CBWD3-202ENST00000377342 PKD1P98161 4303 aa13.96□□□□□ -0.17
CBWD3-202ENST00000377342 APOMO95445 188 aa13.95□□□□□ -0.18
CBWD3-202ENST00000377342 LINC00526Q96FQ7 95 aa13.95□□□□□ -0.18
CBWD3-202ENST00000377342 CFAP161Q6P656 301 aa13.94□□□□□ -0.18
CBWD3-202ENST00000377342 Q8N814 137 aa13.94□□□□□ -0.18
CBWD3-202ENST00000377342 SPAG11BQ08648 103 aa13.93□□□□□ -0.18
CBWD3-202ENST00000377342 KIAA0087Q14695 138 aa13.93□□□□□ -0.18
CBWD3-202ENST00000377342 LINC00336Q6ZUF6 198 aa13.93□□□□□ -0.18
CBWD3-202ENST00000377342 SCGB1D1O95968 90 aa13.92□□□□□ -0.18
CBWD3-202ENST00000377342 JOSD1Q15040 202 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-202ENST00000377342 hDV102S1A0JD36 115 aa13.91□□□□□ -0.18
CBWD3-202ENST00000377342 STPG4Q8N801 248 aa13.91□□□□□ -0.18
CBWD3-202ENST00000377342 PYY3Q5JQD4 70 aa13.91□□□□□ -0.18
CBWD3-202ENST00000377342 HECTD4Q9Y4D8 3996 aa13.9□□□□□ -0.18
CBWD3-202ENST00000377342 LOC105371267A0A1B0GV96 52 aa13.9□□□□□ -0.18
CBWD3-202ENST00000377342 C14orf177Q52M58 125 aa13.9□□□□□ -0.18
CBWD3-202ENST00000377342 Q8IZM0 81 aa13.9□□□□□ -0.18
CBWD3-202ENST00000377342 TOMM7Q9P0U1 55 aa13.9□□□□□ -0.18
CBWD3-202ENST00000377342 SLPIP03973 132 aa13.89□□□□□ -0.19
CBWD3-202ENST00000377342 AKR1D1P51857 326 aa13.89□□□□□ -0.19
CBWD3-202ENST00000377342 MAJINQ3KP22 176 aa13.89□□□□□ -0.19
CBWD3-202ENST00000377342 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-202ENST00000377342 TSPEAR-AS2P59090 65 aa13.88□□□□□ -0.19
CBWD3-202ENST00000377342 COX7B2Q8TF08 81 aa13.88□□□□□ -0.19
CBWD3-202ENST00000377342 NTN5Q8WTR8 489 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-202ENST00000377342 ZNF561-AS1K7EIQ3 104 aa13.88□□□□□ -0.19
CBWD3-202ENST00000377342 HERVK_113P61574 105 aa13.87□□□□□ -0.19
CBWD3-202ENST00000377342 ANKRD39Q53RE8 183 aa13.87□□□□□ -0.19
CBWD3-202ENST00000377342 E9PLD3 99 aa13.86□□□□□ -0.19
CBWD3-202ENST00000377342 FUSP35637 526 aaKnown RBP eCLIP13.86□□□□□ -0.19
CBWD3-202ENST00000377342 IGKV2D-26A0A0A0MRZ7 120 aa13.85□□□□□ -0.19
CBWD3-202ENST00000377342 A0A1B0GVY2 172 aa13.85□□□□□ -0.19
CBWD3-202ENST00000377342 CDPF1Q6NVV7 123 aa13.85□□□□□ -0.19
CBWD3-202ENST00000377342 C2orf82Q6UX34 121 aa13.85□□□□□ -0.19
CBWD3-202ENST00000377342 C2orf48Q96LS8 159 aa13.85□□□□□ -0.19
CBWD3-202ENST00000377342 PKHD1P08F94 4074 aa13.85□□□□□ -0.19
CBWD3-202ENST00000377342 LEPROTO15243 131 aa13.85□□□□□ -0.19
CBWD3-202ENST00000377342 PRSS2P07478 247 aa13.85□□□□□ -0.19
CBWD3-202ENST00000377342 KRTAP10-2P60368 255 aa13.85□□□□□ -0.19
CBWD3-202ENST00000377342 CNBPP62633 177 aaKnown RBP13.85□□□□□ -0.19
CBWD3-202ENST00000377342 EREGO14944 169 aa13.84□□□□□ -0.19
CBWD3-202ENST00000377342 C10orf25Q5T742 122 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms