RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 IL17DQ8TAD2 202 aa6.9□□□□□ -1.3
SF3A3-201ENST00000373019 Q9H8V8 135 aa6.9□□□□□ -1.3
SF3A3-201ENST00000373019 RBMY1BA6NDE4 496 aaKnown RBP6.9□□□□□ -1.31
SF3A3-201ENST00000373019 RBMY1EA6NEQ0 496 aaKnown RBP6.9□□□□□ -1.31
SF3A3-201ENST00000373019 ODF3BA8MYP8 253 aa6.9□□□□□ -1.31
SF3A3-201ENST00000373019 RBMY1DP0C7P1 496 aaKnown RBP6.9□□□□□ -1.31
SF3A3-201ENST00000373019 RBMY1A1P0DJD3 496 aaKnown RBP6.9□□□□□ -1.31
SF3A3-201ENST00000373019 RBMY1CP0DJD4 496 aa6.9□□□□□ -1.31
SF3A3-201ENST00000373019 RBMY1FQ15415 496 aaKnown RBP6.9□□□□□ -1.31
SF3A3-201ENST00000373019 ECSCRQ19T08 205 aa6.9□□□□□ -1.31
SF3A3-201ENST00000373019 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-201ENST00000373019 FAM19A1Q7Z5A9 133 aa6.89□□□□□ -1.31
SF3A3-201ENST00000373019 Q8N9W7 124 aa6.89□□□□□ -1.31
SF3A3-201ENST00000373019 MAPK1IP1LQ8NDC0 245 aa6.89□□□□□ -1.31
SF3A3-201ENST00000373019 LINC00474Q9P2X8 69 aa6.89□□□□□ -1.31
SF3A3-201ENST00000373019 FN1P02751 2386 aaKnown RBP6.89□□□□□ -1.31
SF3A3-201ENST00000373019 IGHV3-16A0A0C4DH30 117 aa6.89□□□□□ -1.31
SF3A3-201ENST00000373019 G3V318 75 aa6.89□□□□□ -1.31
SF3A3-201ENST00000373019 NCR3O14931 201 aa6.89□□□□□ -1.31
SF3A3-201ENST00000373019 ATP6V0E1O15342 81 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 KRTAP10-9P60411 292 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 COX6A2Q02221 97 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 SS18Q15532 418 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 C1orf195Q5TG92 126 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 UNQ9165/PRO28630Q6UXU0 137 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 IGLV5-45A0A087WSX0 123 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 SMIM26A0A096LP01 95 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 PIK3CD-AS1Q5SR53 167 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 Q9UF83 564 aa6.88□□□□□ -1.31
SF3A3-201ENST00000373019 FLNAP21333 2647 aaKnown RBP6.88□□□□□ -1.31
SF3A3-201ENST00000373019 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
SF3A3-201ENST00000373019 LY6HO94772 140 aa6.87□□□□□ -1.31
SF3A3-201ENST00000373019 CHCHD7Q9BUK0 85 aa6.87□□□□□ -1.31
SF3A3-201ENST00000373019 SIRPDQ9H106 197 aa6.87□□□□□ -1.31
SF3A3-201ENST00000373019 CYSRT1A8MQ03 144 aa6.87□□□□□ -1.31
SF3A3-201ENST00000373019 LINC00337Q8N6G1 96 aa6.87□□□□□ -1.31
SF3A3-201ENST00000373019 BRK1Q8WUW1 75 aa6.86□□□□□ -1.31
SF3A3-201ENST00000373019 ENHOQ6UWT2 76 aa6.86□□□□□ -1.31
SF3A3-201ENST00000373019 LINC00482Q8N8I6 264 aa6.86□□□□□ -1.31
SF3A3-201ENST00000373019 PROK1P58294 105 aa6.86□□□□□ -1.31
SF3A3-201ENST00000373019 KLKP1Q107X0 134 aa6.86□□□□□ -1.31
SF3A3-201ENST00000373019 IGKV2-28A0A075B6P5 120 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 KNCNA6PVL3 124 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 IGKV2D-28P01615 120 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 ATRQ13535 2644 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 CELSR1Q9NYQ6 3014 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 IGKV3-7A0A075B6H7 116 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-201ENST00000373019 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-201ENST00000373019 CCKP06307 115 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 CCL19Q99731 98 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 E7EQL1 145 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 MINOS1Q5TGZ0 78 aa6.85□□□□□ -1.31
SF3A3-201ENST00000373019 SMIM11BQ8TCY0 68 aa6.84□□□□□ -1.31
SF3A3-201ENST00000373019 LINC00467Q9BRT7 94 aa6.83□□□□□ -1.32
SF3A3-201ENST00000373019 PF4P02776 101 aa6.83□□□□□ -1.32
SF3A3-201ENST00000373019 MIR7-3HGQ8N6C7 128 aa6.83□□□□□ -1.32
SF3A3-201ENST00000373019 COPS9Q8WXC6 57 aa6.83□□□□□ -1.32
SF3A3-201ENST00000373019 IGHV3-73A0A0B4J1V6 119 aa6.83□□□□□ -1.32
SF3A3-201ENST00000373019 SLPIP03973 132 aa6.83□□□□□ -1.32
SF3A3-201ENST00000373019 RMI2Q96E14 147 aa6.83□□□□□ -1.32
SF3A3-201ENST00000373019 NOTCH3Q9UM47 2321 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 TRBV7-6A0A0J9YX20 115 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 SMIM1B2RUZ4 78 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 SNURFQ9Y675 71 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 TRAV13-2A0A0B4J235 113 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 LINC00242Q5T6M2 205 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 BPESC1Q9GZL8 116 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 IGHV3OR16-12A0A075B7B8 117 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 LECT2O14960 151 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 OVOL2Q9BRP0 275 aa6.82□□□□□ -1.32
SF3A3-201ENST00000373019 APCP25054 2843 aa6.81□□□□□ -1.32
SF3A3-201ENST00000373019 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
SF3A3-201ENST00000373019 F8WEM9 126 aa6.81□□□□□ -1.32
SF3A3-201ENST00000373019 C11orf72Q8NBR9 251 aa6.81□□□□□ -1.32
SF3A3-201ENST00000373019 TRBV10-3A0A0K0K1G6 114 aa6.81□□□□□ -1.32
SF3A3-201ENST00000373019 Q6ZSN1 163 aa6.8□□□□□ -1.32
SF3A3-201ENST00000373019 RETNQ9HD89 108 aa6.8□□□□□ -1.32
SF3A3-201ENST00000373019 CRPP02741 224 aa6.8□□□□□ -1.32
SF3A3-201ENST00000373019 FAM229BQ4G0N7 80 aa6.8□□□□□ -1.32
SF3A3-201ENST00000373019 NBPF19A0A087WUL8 3843 aa6.79□□□□□ -1.32
SF3A3-201ENST00000373019 CSMD2Q7Z408 3487 aa6.79□□□□□ -1.32
SF3A3-201ENST00000373019 H0YGX0 51 aa6.79□□□□□ -1.32
SF3A3-201ENST00000373019 NDUFA4O00483 81 aa6.79□□□□□ -1.32
SF3A3-201ENST00000373019 S100A7L2Q5SY68 101 aa6.79□□□□□ -1.32
SF3A3-201ENST00000373019 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
SF3A3-201ENST00000373019 NIPBLQ6KC79 2804 aaeCLIP6.78□□□□□ -1.32
SF3A3-201ENST00000373019 ZANQ9Y493 2812 aa6.78□□□□□ -1.32
SF3A3-201ENST00000373019 IGHV1OR15-1A0A075B7D0 117 aa6.78□□□□□ -1.32
SF3A3-201ENST00000373019 IGHV3-38A0A0C4DH36 116 aa6.78□□□□□ -1.32
SF3A3-201ENST00000373019 BCE1O60756 84 aa6.78□□□□□ -1.32
SF3A3-201ENST00000373019 RHPN1-AS1Q9BWJ2 59 aa6.78□□□□□ -1.32
SF3A3-201ENST00000373019 RPL36AP83881 106 aaKnown RBP6.78□□□□□ -1.32
SF3A3-201ENST00000373019 RPL36ALQ969Q0 106 aaKnown RBP6.78□□□□□ -1.32
SF3A3-201ENST00000373019 IGKV3-20P01619 116 aa6.77□□□□□ -1.33
SF3A3-201ENST00000373019 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
SF3A3-201ENST00000373019 C19orf54Q5BKX5 351 aa6.77□□□□□ -1.33
SF3A3-201ENST00000373019 FAM19A3Q7Z5A8 133 aa6.77□□□□□ -1.33
SF3A3-201ENST00000373019 SND1-IT1Q9HBX3 110 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms