RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 BSNQ9UPA5 3926 aa12.66□□□□□ -0.38
CHTOP-201ENST00000368686 RPL35AP18077 110 aaKnown RBP12.66□□□□□ -0.38
CHTOP-201ENST00000368686 NTM-AS1Q6ZSK4 140 aa12.66□□□□□ -0.38
CHTOP-201ENST00000368686 TMEM86BQ8N661 226 aa12.66□□□□□ -0.38
CHTOP-201ENST00000368686 ACACAQ13085 2346 aa12.66□□□□□ -0.38
CHTOP-201ENST00000368686 TMEM89A2RUT3 159 aa12.65□□□□□ -0.38
CHTOP-201ENST00000368686 FP248Q71RG6 208 aaPredicted RBP12.65□□□□□ -0.38
CHTOP-201ENST00000368686 TRBV10-1A0A0K0K1A3 114 aa12.64□□□□□ -0.39
CHTOP-201ENST00000368686 K7EQD1 137 aa12.64□□□□□ -0.39
CHTOP-201ENST00000368686 CDSNQ15517 529 aa12.64□□□□□ -0.39
CHTOP-201ENST00000368686 DEFB131AP59861 70 aa12.64□□□□□ -0.39
CHTOP-201ENST00000368686 COL6A6A6NMZ7 2263 aa12.64□□□□□ -0.39
CHTOP-201ENST00000368686 UBE2L6O14933 153 aa12.63□□□□□ -0.39
CHTOP-201ENST00000368686 Q8N814 137 aa12.63□□□□□ -0.39
CHTOP-201ENST00000368686 PKIGQ9Y2B9 76 aa12.63□□□□□ -0.39
CHTOP-201ENST00000368686 SORL1Q92673 2214 aa12.61□□□□□ -0.39
CHTOP-201ENST00000368686 NDUFC1O43677 76 aa12.6□□□□□ -0.39
CHTOP-201ENST00000368686 ATP5EP56381 51 aaPredicted RBP12.6□□□□□ -0.39
CHTOP-201ENST00000368686 LINC00482Q8N8I6 264 aa12.6□□□□□ -0.39
CHTOP-201ENST00000368686 SVEP1Q4LDE5 3571 aa12.6□□□□□ -0.39
CHTOP-201ENST00000368686 HRNRQ86YZ3 2850 aaPredicted RBP12.6□□□□□ -0.39
CHTOP-201ENST00000368686 IGHV4-38-2P0DP08 117 aa12.6□□□□□ -0.39
CHTOP-201ENST00000368686 OTOGLQ3ZCN5 2332 aa12.6□□□□□ -0.39
CHTOP-201ENST00000368686 A0A1W2PPR1 153 aa12.59□□□□□ -0.39
CHTOP-201ENST00000368686 F8WEM9 126 aa12.59□□□□□ -0.39
CHTOP-201ENST00000368686 WFDC11Q8NEX6 87 aa12.59□□□□□ -0.39
CHTOP-201ENST00000368686 LAMA5O15230 3695 aa12.59□□□□□ -0.39
CHTOP-201ENST00000368686 INSP01308 110 aa12.59□□□□□ -0.39
CHTOP-201ENST00000368686 NBL1P41271 181 aa12.59□□□□□ -0.39
CHTOP-201ENST00000368686 ANKRD11Q6UB99 2663 aaPredicted RBP12.59□□□□□ -0.39
CHTOP-201ENST00000368686 ADORA2A-AS1P86434 159 aa12.58□□□□□ -0.4
CHTOP-201ENST00000368686 RMI2Q96E14 147 aa12.58□□□□□ -0.4
CHTOP-201ENST00000368686 SNURFQ9Y675 71 aa12.58□□□□□ -0.4
CHTOP-201ENST00000368686 RELNP78509 3460 aa12.56□□□□□ -0.4
CHTOP-201ENST00000368686 TRBV7-6A0A0J9YX20 115 aa12.56□□□□□ -0.4
CHTOP-201ENST00000368686 AVPP01185 164 aa12.56□□□□□ -0.4
CHTOP-201ENST00000368686 PTPRZ1P23471 2315 aaPredicted RBP12.56□□□□□ -0.4
CHTOP-201ENST00000368686 ATMQ13315 3056 aa12.56□□□□□ -0.4
CHTOP-201ENST00000368686 LINC01547P58512 204 aaPredicted RBP12.55□□□□□ -0.4
CHTOP-201ENST00000368686 RBM3P98179 157 aaKnown RBP12.55□□□□□ -0.4
CHTOP-201ENST00000368686 IGHV3OR16-9A0A0B4J2B5 98 aa12.55□□□□□ -0.4
CHTOP-201ENST00000368686 C10orf99Q6UWK7 81 aa12.55□□□□□ -0.4
CHTOP-201ENST00000368686 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
CHTOP-201ENST00000368686 Q6ZQT0 140 aa12.54□□□□□ -0.4
CHTOP-201ENST00000368686 Q6ZTI0 123 aa12.54□□□□□ -0.4
CHTOP-201ENST00000368686 A0A087WZ39 114 aa12.54□□□□□ -0.4
CHTOP-201ENST00000368686 TRAV10A0A0B4J240 114 aa12.54□□□□□ -0.4
CHTOP-201ENST00000368686 LOC110117498A0A087WWA1 95 aa12.53□□□□□ -0.4
CHTOP-201ENST00000368686 A0A096LNT2 108 aa12.53□□□□□ -0.4
CHTOP-201ENST00000368686 A0A1W2PRX2 142 aa12.52□□□□□ -0.41
CHTOP-201ENST00000368686 NANOS2P60321 138 aaKnown RBP12.52□□□□□ -0.41
CHTOP-201ENST00000368686 IL17DQ8TAD2 202 aa12.52□□□□□ -0.41
CHTOP-201ENST00000368686 BRK1Q8WUW1 75 aa12.51□□□□□ -0.41
CHTOP-201ENST00000368686 ABCA2Q9BZC7 2435 aa12.51□□□□□ -0.41
CHTOP-201ENST00000368686 ZFHX3Q15911 3703 aa12.51□□□□□ -0.41
CHTOP-201ENST00000368686 CXCL6P80162 114 aa12.51□□□□□ -0.41
CHTOP-201ENST00000368686 LINC00474Q9P2X8 69 aa12.51□□□□□ -0.41
CHTOP-201ENST00000368686 V9GYY9 64 aa12.51□□□□□ -0.41
CHTOP-201ENST00000368686 MUC6Q6W4X9 2439 aa12.51□□□□□ -0.41
CHTOP-201ENST00000368686 IGKV3OR2-268A0A0C4DH90 116 aa12.5□□□□□ -0.41
CHTOP-201ENST00000368686 C1orf195Q5TG92 126 aa12.5□□□□□ -0.41
CHTOP-201ENST00000368686 HAMPP81172 84 aa12.5□□□□□ -0.41
CHTOP-201ENST00000368686 Q6ZVQ6 151 aa12.5□□□□□ -0.41
CHTOP-201ENST00000368686 EP300Q09472 2414 aaPredicted RBP12.5□□□□□ -0.41
CHTOP-201ENST00000368686 RNASE1P07998 156 aaKnown RBP12.49□□□□□ -0.41
CHTOP-201ENST00000368686 MAP6D1Q9H9H5 199 aa12.49□□□□□ -0.41
CHTOP-201ENST00000368686 ASH1LQ9NR48 2969 aaKnown RBP12.48□□□□□ -0.41
CHTOP-201ENST00000368686 ZNF561-AS1K7EIQ3 104 aa12.48□□□□□ -0.41
CHTOP-201ENST00000368686 C6orf226Q5I0X4 101 aa12.48□□□□□ -0.41
CHTOP-201ENST00000368686 TRBV7-4A0A0J9YYF1 115 aa12.47□□□□□ -0.41
CHTOP-201ENST00000368686 C11orf44Q8N8P7 122 aa12.47□□□□□ -0.41
CHTOP-201ENST00000368686 MIFP14174 115 aa12.46□□□□□ -0.41
CHTOP-201ENST00000368686 C6orf223Q8N319 242 aa12.46□□□□□ -0.41
CHTOP-201ENST00000368686 SPTAN1Q13813 2472 aaKnown RBP12.46□□□□□ -0.41
CHTOP-201ENST00000368686 SEC61GP60059 68 aa12.46□□□□□ -0.42
CHTOP-201ENST00000368686 GVINP1Q7Z2Y8 2422 aa12.46□□□□□ -0.42
CHTOP-201ENST00000368686 UBE2E2Q96LR5 201 aa12.45□□□□□ -0.42
CHTOP-201ENST00000368686 IGHV4-61A0A0C4DH41 118 aa12.45□□□□□ -0.42
CHTOP-201ENST00000368686 PDE6GP18545 87 aa12.45□□□□□ -0.42
CHTOP-201ENST00000368686 Q8N3U1 123 aa12.45□□□□□ -0.42
CHTOP-201ENST00000368686 IGLV4-60A0A075B6I1 120 aa12.44□□□□□ -0.42
CHTOP-201ENST00000368686 C11orf68Q9H3H3 251 aaKnown RBP12.44□□□□□ -0.42
CHTOP-201ENST00000368686 LINC00575Q6W349 94 aa12.43□□□□□ -0.42
CHTOP-201ENST00000368686 TM2D3Q9BRN9 247 aa12.43□□□□□ -0.42
CHTOP-201ENST00000368686 LAMTOR3Q9UHA4 124 aa12.43□□□□□ -0.42
CHTOP-201ENST00000368686 AKAP13Q12802 2813 aa12.43□□□□□ -0.42
CHTOP-201ENST00000368686 A0A0U1RQV1 116 aa12.42□□□□□ -0.42
CHTOP-201ENST00000368686 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.42□□□□□ -0.422e-22■■■□□ 16
CHTOP-201ENST00000368686 C1orf158Q8N1D5 194 aa12.42□□□□□ -0.42
CHTOP-201ENST00000368686 ERC2-IT1O76042 136 aa12.41□□□□□ -0.42
CHTOP-201ENST00000368686 PRR3P79522 188 aaKnown RBP12.41□□□□□ -0.42
CHTOP-201ENST00000368686 C6orf99Q4VX62 202 aa12.41□□□□□ -0.42
CHTOP-201ENST00000368686 C9orf66Q5T8R8 295 aa12.41□□□□□ -0.42
CHTOP-201ENST00000368686 Q8IZM0 81 aa12.41□□□□□ -0.42
CHTOP-201ENST00000368686 M0R2N4 97 aa12.41□□□□□ -0.42
CHTOP-201ENST00000368686 SLURP1P55000 103 aa12.41□□□□□ -0.42
CHTOP-201ENST00000368686 IGHV4-59P01825 116 aa12.4□□□□□ -0.42
CHTOP-201ENST00000368686 AKAP6Q13023 2319 aa12.39□□□□□ -0.43
CHTOP-201ENST00000368686 LINC00959A0A1B0GUT2 108 aa12.39□□□□□ -0.43
CHTOP-201ENST00000368686 NREPQ16612 68 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms