RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 MRPL35Q9NZE8 188 aaKnown RBP9.81□□□□□ -0.84
CKS1B-202ENST00000368436 IGHV3OR16-9A0A0B4J2B5 98 aa9.8□□□□□ -0.84
CKS1B-202ENST00000368436 C9JQL5 133 aa9.8□□□□□ -0.84
CKS1B-202ENST00000368436 TNFRSF6BO95407 300 aa9.8□□□□□ -0.84
CKS1B-202ENST00000368436 MT-ND6P03923 174 aa9.8□□□□□ -0.84
CKS1B-202ENST00000368436 RPL39P62891 51 aaKnown RBP9.8□□□□□ -0.84
CKS1B-202ENST00000368436 ADIRFQ15847 76 aa9.8□□□□□ -0.84
CKS1B-202ENST00000368436 PHF5AQ7RTV0 110 aaKnown RBP9.8□□□□□ -0.84
CKS1B-202ENST00000368436 NAT8Q9UHE5 227 aa9.8□□□□□ -0.84
CKS1B-202ENST00000368436 RNF213Q63HN8 5207 aa9.8□□□□□ -0.84
CKS1B-202ENST00000368436 MRPS36P82909 103 aaKnown RBP9.79□□□□□ -0.84
CKS1B-202ENST00000368436 ORAOV1Q8WV07 137 aa9.79□□□□□ -0.84
CKS1B-202ENST00000368436 SMIM2Q9BVW6 85 aa9.79□□□□□ -0.84
CKS1B-202ENST00000368436 SPANXA1Q9NS26 97 aa9.79□□□□□ -0.84
CKS1B-202ENST00000368436 C1orf137Q5JT78 98 aa9.78□□□□□ -0.84
CKS1B-202ENST00000368436 TLX1NBP0CAT3 122 aa9.77□□□□□ -0.85
CKS1B-202ENST00000368436 IMMP2LQ96T52 175 aa9.77□□□□□ -0.85
CKS1B-202ENST00000368436 A0A1B0GXF2 115 aa9.76□□□□□ -0.85
CKS1B-202ENST00000368436 D6R8Y8 96 aa9.76□□□□□ -0.85
CKS1B-202ENST00000368436 NDUFA1O15239 70 aa9.76□□□□□ -0.85
CKS1B-202ENST00000368436 S100A8P05109 93 aa9.76□□□□□ -0.85
CKS1B-202ENST00000368436 SRSF3P84103 164 aaKnown RBP9.76□□□□□ -0.85
CKS1B-202ENST00000368436 C10orf25Q5T742 122 aa9.76□□□□□ -0.85
CKS1B-202ENST00000368436 F8W036 122 aa9.75□□□□□ -0.85
CKS1B-202ENST00000368436 NPYP01303 97 aa9.75□□□□□ -0.85
CKS1B-202ENST00000368436 IGLV7-43P04211 117 aa9.75□□□□□ -0.85
CKS1B-202ENST00000368436 HBBP68871 147 aa9.75□□□□□ -0.85
CKS1B-202ENST00000368436 MRPL54Q6P161 138 aaKnown RBP9.75□□□□□ -0.85
CKS1B-202ENST00000368436 FAM168BA1KXE4 195 aa9.74□□□□□ -0.85
CKS1B-202ENST00000368436 IFITM10A6NMD0 228 aa9.74□□□□□ -0.85
CKS1B-202ENST00000368436 PPBPP02775 128 aa9.74□□□□□ -0.85
CKS1B-202ENST00000368436 PEA15Q15121 130 aa9.74□□□□□ -0.85
CKS1B-202ENST00000368436 UNQ6190/PRO20217Q6UXQ8 127 aa9.74□□□□□ -0.85
CKS1B-202ENST00000368436 KRTAP11-1Q8IUC1 163 aa9.74□□□□□ -0.85
CKS1B-202ENST00000368436 SMDT1Q9H4I9 107 aa9.74□□□□□ -0.85
CKS1B-202ENST00000368436 C6orf48Q9UBA6 75 aa9.74□□□□□ -0.85
CKS1B-202ENST00000368436 DIRC1Q969H9 104 aa9.73□□□□□ -0.85
CKS1B-202ENST00000368436 A0A087WZ39 114 aa9.72□□□□□ -0.85
CKS1B-202ENST00000368436 KIAA0087Q14695 138 aa9.72□□□□□ -0.85
CKS1B-202ENST00000368436 PYGO1Q9Y3Y4 419 aa9.72□□□□□ -0.85
CKS1B-202ENST00000368436 TGIF2-C20orf24A0A0A6YYL0 155 aa9.71□□□□□ -0.86
CKS1B-202ENST00000368436 KRTAP7-1Q8IUC3 87 aa9.71□□□□□ -0.86
CKS1B-202ENST00000368436 H0Y9J4 135 aa9.7□□□□□ -0.86
CKS1B-202ENST00000368436 IFI27P40305 119 aaPredicted RBP9.7□□□□□ -0.86
CKS1B-202ENST00000368436 LINC00242Q5T6M2 205 aa9.7□□□□□ -0.86
CKS1B-202ENST00000368436 ORMDL3Q8N138 153 aa9.7□□□□□ -0.86
CKS1B-202ENST00000368436 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
CKS1B-202ENST00000368436 LPAP08519 4548 aa9.69□□□□□ -0.86
CKS1B-202ENST00000368436 IGLV4-3A0A075B6K6 122 aa9.69□□□□□ -0.86
CKS1B-202ENST00000368436 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
CKS1B-202ENST00000368436 RAB5AP20339 215 aa9.69□□□□□ -0.86
CKS1B-202ENST00000368436 GAGE2EQ4V326 116 aa9.69□□□□□ -0.86
CKS1B-202ENST00000368436 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
CKS1B-202ENST00000368436 ATP5L2Q7Z4Y8 100 aa9.69□□□□□ -0.86
CKS1B-202ENST00000368436 FAM19A5Q7Z5A7 132 aaPredicted RBP9.69□□□□□ -0.86
CKS1B-202ENST00000368436 GAGE2DQ9UEU5 116 aa9.69□□□□□ -0.86
CKS1B-202ENST00000368436 TRBV30A0A0K0K1B3 111 aa9.68□□□□□ -0.86
CKS1B-202ENST00000368436 LINC01561Q8N1V8 128 aa9.68□□□□□ -0.86
CKS1B-202ENST00000368436 PRELID3AQ96N28 172 aa9.68□□□□□ -0.86
CKS1B-202ENST00000368436 TMEM141Q96I45 108 aa9.67□□□□□ -0.86
CKS1B-202ENST00000368436 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
CKS1B-202ENST00000368436 KRTAP1-4P0C5Y4 121 aa9.66□□□□□ -0.86
CKS1B-202ENST00000368436 UBE2D1P51668 147 aa9.66□□□□□ -0.86
CKS1B-202ENST00000368436 C2orf82Q6UX34 121 aa9.66□□□□□ -0.86
CKS1B-202ENST00000368436 IGLV1-50A0A075B6I6 118 aa9.65□□□□□ -0.86
CKS1B-202ENST00000368436 A0A1B0GVG6 124 aa9.65□□□□□ -0.86
CKS1B-202ENST00000368436 M0QXV9 152 aa9.65□□□□□ -0.86
CKS1B-202ENST00000368436 C9orf129Q5T035 196 aaKnown RBP9.65□□□□□ -0.86
CKS1B-202ENST00000368436 LAMTOR2Q9Y2Q5 125 aa9.65□□□□□ -0.86
CKS1B-202ENST00000368436 TEX43Q6ZNM6 134 aa9.64□□□□□ -0.87
CKS1B-202ENST00000368436 LOC389332A0A1B0GUA5 103 aa9.63□□□□□ -0.87
CKS1B-202ENST00000368436 UBE2BP63146 152 aa9.63□□□□□ -0.87
CKS1B-202ENST00000368436 PACRGQ96M98 296 aaPredicted RBP9.63□□□□□ -0.87
CKS1B-202ENST00000368436 AMELXQ99217 191 aa9.63□□□□□ -0.87
CKS1B-202ENST00000368436 MAP1LC3AQ9H492 121 aa9.63□□□□□ -0.87
CKS1B-202ENST00000368436 ZC2HC1BQ5TFG8 222 aa9.62□□□□□ -0.87
CKS1B-202ENST00000368436 LINC00173Q6ZV60 143 aa9.62□□□□□ -0.87
CKS1B-202ENST00000368436 Q8N8P6 123 aa9.62□□□□□ -0.87
CKS1B-202ENST00000368436 C2orf88Q9BSF0 95 aa9.62□□□□□ -0.87
CKS1B-202ENST00000368436 CYSLTR1Q9Y271 337 aa9.62□□□□□ -0.87
CKS1B-202ENST00000368436 NPSP0C0P6 89 aa9.61□□□□□ -0.87
CKS1B-202ENST00000368436 C2orf66Q6UXQ4 117 aa9.61□□□□□ -0.87
CKS1B-202ENST00000368436 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
CKS1B-202ENST00000368436 Q6ZN92 141 aa9.6□□□□□ -0.87
CKS1B-202ENST00000368436 VCX2Q9H322 139 aa9.6□□□□□ -0.87
CKS1B-202ENST00000368436 IGIPA6NJ69 53 aa9.59□□□□□ -0.87
CKS1B-202ENST00000368436 ORMDL2Q53FV1 153 aa9.59□□□□□ -0.87
CKS1B-202ENST00000368436 K7EMI3 77 aa9.58□□□□□ -0.88
CKS1B-202ENST00000368436 PRSS2P07478 247 aa9.58□□□□□ -0.88
CKS1B-202ENST00000368436 Q8IZM0 81 aa9.58□□□□□ -0.88
CKS1B-202ENST00000368436 ANAPC16Q96DE5 110 aa9.58□□□□□ -0.88
CKS1B-202ENST00000368436 CARHSP1Q9Y2V2 147 aaKnown RBP9.58□□□□□ -0.88
CKS1B-202ENST00000368436 ZNF861PO60384 105 aa9.57□□□□□ -0.88
CKS1B-202ENST00000368436 RPL13AP40429 203 aaKnown RBP9.57□□□□□ -0.88
CKS1B-202ENST00000368436 CKS1BP61024 79 aa9.57□□□□□ -0.88
CKS1B-202ENST00000368436 PNRC1Q12796 327 aaPredicted RBP9.57□□□□□ -0.88
CKS1B-202ENST00000368436 C6orf226Q5I0X4 101 aa9.57□□□□□ -0.88
CKS1B-202ENST00000368436 MT-ND4LP03901 98 aa9.56□□□□□ -0.88
CKS1B-202ENST00000368436 TOMM7Q9P0U1 55 aa9.56□□□□□ -0.88
CKS1B-202ENST00000368436 C22orf24Q9Y442 160 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms