RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 HIST1H1DP16402 221 aaKnown RBP-0.62□□□□□ -2.51
RNU6-428P-201ENST00000362942 SPRR2EP22531 72 aa-0.62□□□□□ -2.51
RNU6-428P-201ENST00000362942 SPRR2AP35326 72 aa-0.62□□□□□ -2.51
RNU6-428P-201ENST00000362942 ARPC4P59998 168 aa-0.62□□□□□ -2.51
RNU6-428P-201ENST00000362942 SVEP1Q4LDE5 3571 aa-0.62□□□□□ -2.51
RNU6-428P-201ENST00000362942 NBPF19A0A087WUL8 3843 aa-0.62□□□□□ -2.51
RNU6-428P-201ENST00000362942 TEX15Q9BXT5 2789 aa-0.62□□□□□ -2.51
RNU6-428P-201ENST00000362942 TACC2O95359 2948 aa-0.63□□□□□ -2.51
RNU6-428P-201ENST00000362942 UNC13AQ9UPW8 1703 aa-0.63□□□□□ -2.51
RNU6-428P-201ENST00000362942 Q6AWC8 147 aa-0.63□□□□□ -2.51
RNU6-428P-201ENST00000362942 MGST2Q99735 147 aa-0.63□□□□□ -2.51
RNU6-428P-201ENST00000362942 RERGLQ9H628 205 aa-0.63□□□□□ -2.51
RNU6-428P-201ENST00000362942 DYNLRB1Q9NP97 96 aa-0.63□□□□□ -2.51
RNU6-428P-201ENST00000362942 CSPG4Q6UVK1 2322 aa-0.63□□□□□ -2.51
RNU6-428P-201ENST00000362942 RAPGEF6Q8TEU7 1601 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 MTORP42345 2549 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 DNAH3Q8TD57 4116 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 PLECQ15149 4684 aaKnown RBP-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 CNOT1A5YKK6 2376 aaKnown RBP-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 URB1O60287 2271 aaKnown RBP-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 LOC285095A0A1B0GVY8 99 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 SPRR1BP22528 89 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 Q8N8P6 123 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 LINC00472Q9H8W2 130 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 SERP1Q9Y6X1 66 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 TCHHQ07283 1943 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 SPTBN1Q01082 2364 aaKnown RBP-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 DNAH6Q9C0G6 4158 aa-0.64□□□□□ -2.51
RNU6-428P-201ENST00000362942 RIMS1Q86UR5 1692 aaKnown RBP-0.65□□□□□ -2.51
RNU6-428P-201ENST00000362942 CUBNO60494 3623 aa-0.65□□□□□ -2.51
RNU6-428P-201ENST00000362942 KRTAP19-6Q3LI70 58 aa-0.65□□□□□ -2.51
RNU6-428P-201ENST00000362942 NAA60Q9H7X0 242 aa-0.65□□□□□ -2.51
RNU6-428P-201ENST00000362942 NDUFA4L2Q9NRX3 87 aa-0.65□□□□□ -2.51
RNU6-428P-201ENST00000362942 ALMS1Q8TCU4 4167 aa-0.65□□□□□ -2.51
RNU6-428P-201ENST00000362942 KDM5AP29375 1690 aaKnown RBP-0.65□□□□□ -2.51
RNU6-428P-201ENST00000362942 DEFB123Q8N688 67 aa-0.66□□□□□ -2.52
RNU6-428P-201ENST00000362942 PPP3R2Q96LZ3 170 aa-0.66□□□□□ -2.52
RNU6-428P-201ENST00000362942 SNRNP25Q9BV90 132 aaKnown RBP-0.66□□□□□ -2.52
RNU6-428P-201ENST00000362942 LINC01558Q9Y6Z2 57 aa-0.66□□□□□ -2.52
RNU6-428P-201ENST00000362942 LRRK2Q5S007 2527 aa-0.66□□□□□ -2.52
RNU6-428P-201ENST00000362942 SRCAPQ6ZRS2 3230 aa-0.66□□□□□ -2.52
RNU6-428P-201ENST00000362942 PKD1L2Q7Z442 2459 aa-0.66□□□□□ -2.52
RNU6-428P-201ENST00000362942 POLA1P09884 1462 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 GAPVD1Q14C86 1478 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 MUC17Q685J3 4493 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 PKHD1P08F94 4074 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 TRBV7-3A0A075B6L6 115 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 IGLC7A0M8Q6 106 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 MT1HL1P0DM35 61 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 KRTAP6-2Q3LI66 62 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 FXYD6Q9H0Q3 95 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 PSME4Q14997 1843 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 NBEAQ8NFP9 2946 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 CFAP46Q8IYW2 2715 aa-0.67□□□□□ -2.52
RNU6-428P-201ENST00000362942 ARHGEF12Q9NZN5 1544 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 DMXL2Q8TDJ6 3036 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 PKHD1L1Q86WI1 4243 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 FAM25AB3EWG3 89 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 FAM25CB3EWG5 89 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 FAM25GB3EWG6 89 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 MGPP08493 103 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 SELENOWP63302 87 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 NAIPQ13075 1403 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 MYH7P12883 1935 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 CEP295Q9C0D2 2601 aa-0.68□□□□□ -2.52
RNU6-428P-201ENST00000362942 BOD1L1Q8NFC6 3051 aa-0.69□□□□□ -2.52
RNU6-428P-201ENST00000362942 SFT2D2O95562 160 aa-0.69□□□□□ -2.52
RNU6-428P-201ENST00000362942 C8orf59Q8N0T1 100 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-428P-201ENST00000362942 LSM10Q969L4 123 aaKnown RBP-0.69□□□□□ -2.52
RNU6-428P-201ENST00000362942 ARL11Q969Q4 196 aa-0.69□□□□□ -2.52
RNU6-428P-201ENST00000362942 SPRR2FQ96RM1 72 aa-0.69□□□□□ -2.52
RNU6-428P-201ENST00000362942 LYSTQ99698 3801 aa-0.69□□□□□ -2.52
RNU6-428P-201ENST00000362942 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 A0A0C4DFX4 3053 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 ZZEF1O43149 2961 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 TRBV7-4A0A0J9YYF1 115 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 M0R2T5 61 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 HMGN4O00479 90 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 SSSCA1O60232 199 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 DEFB112Q30KQ8 113 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 Q56UQ5 140 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 TMEM263Q8WUH6 116 aaKnown RBP-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 SPANXDQ9BXN6 97 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 FAIMQ9NVQ4 179 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 IQSEC2Q5JU85 1478 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 DNAH2Q9P225 4427 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 CHD7Q9P2D1 2997 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 GVINP1Q7Z2Y8 2422 aa-0.7□□□□□ -2.52
RNU6-428P-201ENST00000362942 BTAF1O14981 1849 aa-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 CPSF1Q10570 1443 aaKnown RBP-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 MYO9AB2RTY4 2548 aa-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 ACACAQ13085 2346 aa-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 UTP20O75691 2785 aaKnown RBP-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 MYOM1P52179 1685 aa-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 IFNGP01579 166 aa-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 WHAMMP3Q1A5X7 153 aa-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 MEIG1Q5JSS6 88 aa-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 MRPL54Q6P161 138 aaKnown RBP-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 MYOZ3Q8TDC0 251 aa-0.71□□□□□ -2.52
RNU6-428P-201ENST00000362942 TLN1Q9Y490 2541 aaKnown RBP-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms