RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 IGHV3-53P01767 116 aa5.97□□□□□ -1.45
CDC42SE1-201ENST00000357235 C18orf65Q6ZTR6 163 aa5.97□□□□□ -1.45
CDC42SE1-201ENST00000357235 FAM236DA0A1B0GTK5 79 aa5.97□□□□□ -1.45
CDC42SE1-201ENST00000357235 NDUFC2-KCTD14E9PQ53 114 aa5.97□□□□□ -1.45
CDC42SE1-201ENST00000357235 NDUFC2O95298 119 aa5.97□□□□□ -1.45
CDC42SE1-201ENST00000357235 FAM236CP0DP71 79 aa5.97□□□□□ -1.45
CDC42SE1-201ENST00000357235 CFHR3Q02985 330 aa5.97□□□□□ -1.45
CDC42SE1-201ENST00000357235 Q9H8V8 135 aa5.97□□□□□ -1.45
CDC42SE1-201ENST00000357235 JMJD1CQ15652 2540 aa5.97□□□□□ -1.45
CDC42SE1-201ENST00000357235 FHL2Q14192 279 aa5.96□□□□□ -1.45
CDC42SE1-201ENST00000357235 FAM104AQ969W3 186 aa5.96□□□□□ -1.45
CDC42SE1-201ENST00000357235 UBE2D4Q9Y2X8 147 aa5.96□□□□□ -1.45
CDC42SE1-201ENST00000357235 A0A087WVE0 104 aa5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 IGKV3OR2-268A0A0C4DH90 116 aa5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 B4DSR2 109 aa5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 CIRBPQ14011 172 aaKnown RBP5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 TMEM243Q9BU79 118 aa5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 XCL2Q9UBD3 114 aa5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 COX7A2LO14548 114 aa5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 DNAL4O96015 105 aa5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 UBE2E2Q96LR5 201 aa5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 CHCHD7Q9BUK0 85 aa5.96□□□□□ -1.46
CDC42SE1-201ENST00000357235 PRIMA1Q86XR5 153 aa5.95□□□□□ -1.46
CDC42SE1-201ENST00000357235 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.95□□□□□ -1.46
CDC42SE1-201ENST00000357235 ABCA12Q86UK0 2595 aa5.95□□□□□ -1.46
CDC42SE1-201ENST00000357235 COX6A2Q02221 97 aa5.95□□□□□ -1.46
CDC42SE1-201ENST00000357235 C1orf195Q5TG92 126 aa5.95□□□□□ -1.46
CDC42SE1-201ENST00000357235 C11orf44Q8N8P7 122 aa5.95□□□□□ -1.46
CDC42SE1-201ENST00000357235 WFDC11Q8NEX6 87 aa5.95□□□□□ -1.46
CDC42SE1-201ENST00000357235 Q6JHZ5 121 aa5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 CCDC168Q8NDH2 2452 aa5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 ANKRD17O75179 2603 aaKnown RBP5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 TRGV1A0A0A0MS02 117 aa5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 RBMY1BA6NDE4 496 aaKnown RBP5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 RBMY1EA6NEQ0 496 aaKnown RBP5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 RBMY1DP0C7P1 496 aaKnown RBP5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 LINC01561Q8N1V8 128 aa5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 DYNLRB2Q8TF09 96 aa5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 CFAP46Q8IYW2 2715 aa5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 NAV2Q8IVL1 2488 aa5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 MXRA5Q9NR99 2828 aa5.94□□□□□ -1.46
CDC42SE1-201ENST00000357235 FAM222AQ5U5X8 452 aa5.93□□□□□ -1.46
CDC42SE1-201ENST00000357235 LRRK2Q5S007 2527 aa5.93□□□□□ -1.46
CDC42SE1-201ENST00000357235 FBN2P35556 2912 aa5.93□□□□□ -1.46
CDC42SE1-201ENST00000357235 A0A0U1RQV1 116 aa5.93□□□□□ -1.46
CDC42SE1-201ENST00000357235 Q8N2B8 174 aa5.93□□□□□ -1.46
CDC42SE1-201ENST00000357235 TOMM7Q9P0U1 55 aa5.93□□□□□ -1.46
CDC42SE1-201ENST00000357235 PIK3CD-AS1Q5SR53 167 aa5.92□□□□□ -1.46
CDC42SE1-201ENST00000357235 LINC00308Q8TCZ7 52 aa5.92□□□□□ -1.46
CDC42SE1-201ENST00000357235 C20orf197Q8N268 126 aa5.92□□□□□ -1.46
CDC42SE1-201ENST00000357235 DOPEY1Q5JWR5 2465 aa5.92□□□□□ -1.46
CDC42SE1-201ENST00000357235 J3QKU1 62 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 GHRHP01286 108 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 A0A1W2PRX2 142 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 PLA2G2AP14555 144 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 Q9HAA7 133 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 C22orf24Q9Y442 160 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 NDUFA1O15239 70 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 BEAN1Q3B7T3 259 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 LINC00242Q5T6M2 205 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 LINC00846Q9NV44 126 aa5.91□□□□□ -1.46
CDC42SE1-201ENST00000357235 FN1P02751 2386 aaKnown RBP5.9□□□□□ -1.46
CDC42SE1-201ENST00000357235 EPM2AB3EWF7 344 aa5.9□□□□□ -1.46
CDC42SE1-201ENST00000357235 HELZ2Q9BYK8 2649 aaKnown RBP5.9□□□□□ -1.47
CDC42SE1-201ENST00000357235 INSP01308 110 aa5.9□□□□□ -1.47
CDC42SE1-201ENST00000357235 SOSTDC1Q6X4U4 206 aa5.9□□□□□ -1.47
CDC42SE1-201ENST00000357235 MAP6D1Q9H9H5 199 aa5.9□□□□□ -1.47
CDC42SE1-201ENST00000357235 TEX15Q9BXT5 2789 aa5.89□□□□□ -1.47
CDC42SE1-201ENST00000357235 TIMM17BO60830 172 aa5.89□□□□□ -1.47
CDC42SE1-201ENST00000357235 C14orf132Q9NPU4 83 aa5.89□□□□□ -1.47
CDC42SE1-201ENST00000357235 TMEM89A2RUT3 159 aa5.89□□□□□ -1.47
CDC42SE1-201ENST00000357235 XCL1P47992 114 aa5.89□□□□□ -1.47
CDC42SE1-201ENST00000357235 STHQ8IWL8 128 aa5.89□□□□□ -1.47
CDC42SE1-201ENST00000357235 LINC01356Q8N9X3 169 aa5.89□□□□□ -1.47
CDC42SE1-201ENST00000357235 C16orf95Q9H693 158 aa5.89□□□□□ -1.47
CDC42SE1-201ENST00000357235 UBE2L6O14933 153 aa5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 RPL36AP83881 106 aaKnown RBP5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 Q6ZTI0 123 aa5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 C11orf72Q8NBR9 251 aa5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 RPL36ALQ969Q0 106 aaKnown RBP5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 ZNF702PQ9H963 129 aa5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 NF1P21359 2839 aa5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 TRAV23DV6A0A075B6W5 121 aa5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 SMIM1B2RUZ4 78 aa5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 C11orf68Q9H3H3 251 aaKnown RBP5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 NIPBLQ6KC79 2804 aaeCLIP5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 FAM218AQ96MZ4 157 aa5.88□□□□□ -1.47
CDC42SE1-201ENST00000357235 FP248Q71RG6 208 aaPredicted RBP5.87□□□□□ -1.47
CDC42SE1-201ENST00000357235 COPS9Q8WXC6 57 aa5.87□□□□□ -1.47
CDC42SE1-201ENST00000357235 HILS1P60008 231 aa5.87□□□□□ -1.47
CDC42SE1-201ENST00000357235 NOP10Q9NPE3 64 aaKnown RBP5.87□□□□□ -1.47
CDC42SE1-201ENST00000357235 TRGV2A0A075B6R0 118 aa5.86□□□□□ -1.47
CDC42SE1-201ENST00000357235 LINC00158P58513 81 aa5.86□□□□□ -1.47
CDC42SE1-201ENST00000357235 H7BZZ5 65 aa5.86□□□□□ -1.47
CDC42SE1-201ENST00000357235 CRPP02741 224 aa5.86□□□□□ -1.47
CDC42SE1-201ENST00000357235 RPL28P46779 137 aaKnown RBP5.86□□□□□ -1.47
CDC42SE1-201ENST00000357235 NTM-AS1Q6ZSK4 140 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms