RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 IGKCP01834 107 aa4.81□□□□□ -1.64
VPS13A-201ENST00000355766 PRM2P04554 102 aa4.81□□□□□ -1.64
VPS13A-201ENST00000355766 ATP5G1P05496 136 aa4.81□□□□□ -1.64
VPS13A-201ENST00000355766 PRSS1P07477 247 aa4.81□□□□□ -1.64
VPS13A-201ENST00000355766 DDTP30046 118 aa4.81□□□□□ -1.64
VPS13A-201ENST00000355766 FAM222AQ5U5X8 452 aa4.81□□□□□ -1.64
VPS13A-201ENST00000355766 UQCR10Q9UDW1 63 aa4.81□□□□□ -1.64
VPS13A-201ENST00000355766 IGHV3-73A0A0B4J1V6 119 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 TRAV10A0A0B4J240 114 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 P0DMU3 169 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 FAM231AP0DMU4 169 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 FAM231CP0DMU5 169 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 TIRAPP58753 221 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 DAD1P61803 113 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 SPATA45Q537H7 98 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.8□□□□□ -1.64
VPS13A-201ENST00000355766 Q6ZR54 194 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 NFE4Q86UQ8 179 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 BAALCQ8WXS3 180 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 MIEN1Q9BRT3 115 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 CHCHD7Q9BUK0 85 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 HHLA3Q9XRX5 114 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 PAM16Q9Y3D7 125 aa4.8□□□□□ -1.64
VPS13A-201ENST00000355766 MYCBP2O75592 4640 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 TRBV25-1A0A075B6N4 114 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 DEFB4AO15263 64 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 IGLC3P0DOY3 106 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 DEFB130BP0DP73 79 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 DEFB130AP0DP74 79 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 SEC11AP67812 179 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 LBHQ53QV2 105 aaPredicted RBP4.79□□□□□ -1.64
VPS13A-201ENST00000355766 Q6ZTC4 211 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 NEGR1Q7Z3B1 354 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 FAM19A3Q7Z5A8 133 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 ZNRF2Q8NHG8 242 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 AMELXQ99217 191 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 C2orf88Q9BSF0 95 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 TMEM243Q9BU79 118 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 CST9LQ9H4G1 147 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 UBE2D4Q9Y2X8 147 aa4.79□□□□□ -1.64
VPS13A-201ENST00000355766 CHTOPQ9Y3Y2 248 aaKnown RBP4.79□□□□□ -1.64
VPS13A-201ENST00000355766 IGLV4-3A0A075B6K6 122 aa4.78□□□□□ -1.64
VPS13A-201ENST00000355766 TRBV6-8A0A0A6YYG3 113 aa4.78□□□□□ -1.64
VPS13A-201ENST00000355766 C11orf86A6NJI1 115 aa4.78□□□□□ -1.64
VPS13A-201ENST00000355766 COX8AP10176 69 aa4.78□□□□□ -1.64
VPS13A-201ENST00000355766 EMP1P54849 157 aa4.78□□□□□ -1.64
VPS13A-201ENST00000355766 HERVK_113P61574 105 aa4.78□□□□□ -1.64
VPS13A-201ENST00000355766 VCX2Q9H322 139 aa4.78□□□□□ -1.64
VPS13A-201ENST00000355766 MRPL35Q9NZE8 188 aaKnown RBP4.78□□□□□ -1.64
VPS13A-201ENST00000355766 MRPS16Q9Y3D3 137 aaKnown RBP4.78□□□□□ -1.64
VPS13A-201ENST00000355766 A0A1B0GUV1 79 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 GAGE12JA6NER3 117 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 H0Y8G0 127 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 SIVA1O15304 175 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 CCL25O15444 150 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 RPL39P62891 51 aaKnown RBP4.77□□□□□ -1.65
VPS13A-201ENST00000355766 GAGE1Q13065 139 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 GAGE4Q13068 117 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 GAGE5Q13069 117 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 MRPL23Q16540 153 aaKnown RBP4.77□□□□□ -1.65
VPS13A-201ENST00000355766 SLC25A34Q6PIV7 304 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 BOD1L2Q8IYS8 172 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 ATP6V0E2Q8NHE4 81 aa4.77□□□□□ -1.65
VPS13A-201ENST00000355766 IGLV4-69A0A075B6H9 119 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 IGLV5-45A0A087WSX0 123 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 TINCRA0A1B0GVN0 87 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 E9PLD3 99 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 UBE2L6O14933 153 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 FGF6P10767 208 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 C1orf134Q5TEV5 83 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 ZC2HC1BQ5TFG8 222 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 DGAT2L7PQ6IED9 249 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 ATOH7Q8N100 152 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 OR5A1Q8NGJ0 315 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 TMEM101Q96IK0 257 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 ICOSQ9Y6W8 199 aa4.76□□□□□ -1.65
VPS13A-201ENST00000355766 hDV102S1A0JD36 115 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 PCP4L1A6NKN8 68 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 EPM2AB3EWF7 344 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 INAFM2P0DMQ5 153 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 HNRNPA3P51991 378 aaKnown RBP4.75□□□□□ -1.65
VPS13A-201ENST00000355766 HERVK_113P63121 156 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 AMMECR1LQ6DCA0 310 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 NTM-AS1Q6ZSK4 140 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 UBE2DNLQ8IWF7 75 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 FAM104AQ969W3 186 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 VSIG2Q96IQ7 327 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 CHAC1Q9BUX1 264 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 HIGD1BQ9P298 99 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 Q9UF83 564 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
VPS13A-201ENST00000355766 DEFB131BA0A096LNP1 70 aa4.74□□□□□ -1.65
VPS13A-201ENST00000355766 H3BRM9 83 aa4.74□□□□□ -1.65
VPS13A-201ENST00000355766 UBE2D1P51668 147 aa4.74□□□□□ -1.65
VPS13A-201ENST00000355766 C12orf74Q32Q52 190 aa4.74□□□□□ -1.65
VPS13A-201ENST00000355766 LELP1Q5T871 98 aa4.74□□□□□ -1.65
VPS13A-201ENST00000355766 PRO1933Q9H354 126 aa4.74□□□□□ -1.65
VPS13A-201ENST00000355766 CDC42SE2Q9NRR3 84 aa4.74□□□□□ -1.65
VPS13A-201ENST00000355766 HMCN2Q8NDA2 5059 aa4.74□□□□□ -1.65
VPS13A-201ENST00000355766 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms