RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SPTSSBQ8NFR3 76 aa13.15□□□□□ -0.3
COL18A1-202ENST00000355480 LINC00474Q9P2X8 69 aa13.15□□□□□ -0.3
COL18A1-202ENST00000355480 NCOR2Q9Y618 2525 aa13.15□□□□□ -0.3
COL18A1-202ENST00000355480 NUP210LQ5VU65 1888 aa13.15□□□□□ -0.3
COL18A1-202ENST00000355480 POLR2KP53803 58 aaKnown RBP13.15□□□□□ -0.3
COL18A1-202ENST00000355480 UBE2D2P62837 147 aa13.15□□□□□ -0.3
COL18A1-202ENST00000355480 PCNX3Q9H6A9 2034 aa13.15□□□□□ -0.31
COL18A1-202ENST00000355480 WFDC13Q8IUB5 93 aa13.14□□□□□ -0.31
COL18A1-202ENST00000355480 NDUFV3P56181 108 aaKnown RBP13.14□□□□□ -0.31
COL18A1-202ENST00000355480 MPLKIPQ8TAP9 179 aa13.14□□□□□ -0.31
COL18A1-202ENST00000355480 TANC2Q9HCD6 1990 aa13.13□□□□□ -0.31
COL18A1-202ENST00000355480 PLXNB1O43157 2135 aa13.13□□□□□ -0.31
COL18A1-202ENST00000355480 RETNQ9HD89 108 aa13.13□□□□□ -0.31
COL18A1-202ENST00000355480 EDN2P20800 178 aa13.12□□□□□ -0.31
COL18A1-202ENST00000355480 PRRC2AP48634 2157 aaKnown RBP13.12□□□□□ -0.31
COL18A1-202ENST00000355480 K7ERS5 55 aa13.12□□□□□ -0.31
COL18A1-202ENST00000355480 ZNF73O43830 326 aaPredicted RBP13.12□□□□□ -0.31
COL18A1-202ENST00000355480 COX17Q14061 63 aa13.12□□□□□ -0.31
COL18A1-202ENST00000355480 ODF3L2Q3SX64 289 aa13.12□□□□□ -0.31
COL18A1-202ENST00000355480 SMIM11BQ8TCY0 68 aa13.12□□□□□ -0.31
COL18A1-202ENST00000355480 CYSRT1A8MQ03 144 aa13.11□□□□□ -0.31
COL18A1-202ENST00000355480 CDC42SE2Q9NRR3 84 aa13.11□□□□□ -0.31
COL18A1-202ENST00000355480 FAM236DA0A1B0GTK5 79 aa13.11□□□□□ -0.31
COL18A1-202ENST00000355480 UQCRQO14949 82 aa13.11□□□□□ -0.31
COL18A1-202ENST00000355480 FAM236CP0DP71 79 aa13.11□□□□□ -0.31
COL18A1-202ENST00000355480 Q8IZM0 81 aa13.11□□□□□ -0.31
COL18A1-202ENST00000355480 DOPEY1Q5JWR5 2465 aa13.1□□□□□ -0.31
COL18A1-202ENST00000355480 GAS8-AS1O95177 125 aa13.1□□□□□ -0.31
COL18A1-202ENST00000355480 NUPR2A6NF83 97 aa13.1□□□□□ -0.31
COL18A1-202ENST00000355480 MRPS12O15235 138 aaKnown RBP13.1□□□□□ -0.31
COL18A1-202ENST00000355480 PIEZO1Q92508 2521 aa13.09□□□□□ -0.31
COL18A1-202ENST00000355480 IGF2RP11717 2491 aa13.07□□□□□ -0.32
COL18A1-202ENST00000355480 BRI3O95415 125 aa13.07□□□□□ -0.32
COL18A1-202ENST00000355480 C2CD3Q4AC94 2353 aa13.06□□□□□ -0.32
COL18A1-202ENST00000355480 POM121L12Q8N7R1 296 aa13.06□□□□□ -0.32
COL18A1-202ENST00000355480 IGLV1-51P01701 117 aa13.05□□□□□ -0.32
COL18A1-202ENST00000355480 M0QXV9 152 aa13.05□□□□□ -0.32
COL18A1-202ENST00000355480 LST1O00453 97 aa13.05□□□□□ -0.32
COL18A1-202ENST00000355480 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
COL18A1-202ENST00000355480 UNQ6190/PRO20217Q6UXQ8 127 aa13.04□□□□□ -0.32
COL18A1-202ENST00000355480 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.04□□□□□ -0.32
COL18A1-202ENST00000355480 FAM19A3Q7Z5A8 133 aa13.04□□□□□ -0.32
COL18A1-202ENST00000355480 MUC7Q8TAX7 377 aa13.04□□□□□ -0.32
COL18A1-202ENST00000355480 PRR15LQ9BU68 103 aa13.04□□□□□ -0.32
COL18A1-202ENST00000355480 YPEL4Q96NS1 127 aa13.02□□□□□ -0.32
COL18A1-202ENST00000355480 C10orf25Q5T742 122 aa13.02□□□□□ -0.32
COL18A1-202ENST00000355480 Q8N9L7 120 aa13.02□□□□□ -0.32
COL18A1-202ENST00000355480 LINC00242Q5T6M2 205 aa13.02□□□□□ -0.33
COL18A1-202ENST00000355480 RPL28P46779 137 aaKnown RBP13.02□□□□□ -0.33
COL18A1-202ENST00000355480 PIEZO2Q9H5I5 2752 aa13.01□□□□□ -0.33
COL18A1-202ENST00000355480 Q6ZTC4 211 aa13.01□□□□□ -0.33
COL18A1-202ENST00000355480 CNFNQ9BYD5 112 aa13.01□□□□□ -0.33
COL18A1-202ENST00000355480 EGFEM1PQ0D2K5 195 aa13.01□□□□□ -0.33
COL18A1-202ENST00000355480 SNURFQ9Y675 71 aa13□□□□□ -0.33
COL18A1-202ENST00000355480 C6orf223Q8N319 242 aa13□□□□□ -0.33
COL18A1-202ENST00000355480 CHCHD7Q9BUK0 85 aa13□□□□□ -0.33
COL18A1-202ENST00000355480 C2orf91Q6ZV80 131 aa13□□□□□ -0.33
COL18A1-202ENST00000355480 IGIPA6NJ69 53 aa13□□□□□ -0.33
COL18A1-202ENST00000355480 C9orf116Q5BN46 136 aaPredicted RBP13□□□□□ -0.33
COL18A1-202ENST00000355480 IGLV5-52A0A0A0MRZ9 124 aa12.99□□□□□ -0.33
COL18A1-202ENST00000355480 NDUFC2-KCTD14E9PQ53 114 aa12.98□□□□□ -0.33
COL18A1-202ENST00000355480 PRR4Q16378 134 aa12.98□□□□□ -0.33
COL18A1-202ENST00000355480 ARHGAP32A7KAX9 2087 aa12.98□□□□□ -0.33
COL18A1-202ENST00000355480 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
COL18A1-202ENST00000355480 SERP1Q9Y6X1 66 aa12.98□□□□□ -0.33
COL18A1-202ENST00000355480 C16orf95Q9H693 158 aa12.97□□□□□ -0.33
COL18A1-202ENST00000355480 A0A1W2PPR1 153 aa12.97□□□□□ -0.33
COL18A1-202ENST00000355480 CIRBP-AS1Q8TBR5 109 aa12.96□□□□□ -0.33
COL18A1-202ENST00000355480 HCFC1P51610 2035 aa12.96□□□□□ -0.33
COL18A1-202ENST00000355480 IGLV4-60A0A075B6I1 120 aa12.96□□□□□ -0.33
COL18A1-202ENST00000355480 REG3GQ6UW15 175 aa12.96□□□□□ -0.34
COL18A1-202ENST00000355480 FHL2Q14192 279 aa12.95□□□□□ -0.34
COL18A1-202ENST00000355480 TRBV10-3A0A0K0K1G6 114 aa12.95□□□□□ -0.34
COL18A1-202ENST00000355480 FAM240AA0A1B0GVK7 77 aa12.95□□□□□ -0.34
COL18A1-202ENST00000355480 SMIM1B2RUZ4 78 aa12.95□□□□□ -0.34
COL18A1-202ENST00000355480 FAM30AQ9NZY2 134 aa12.95□□□□□ -0.34
COL18A1-202ENST00000355480 SERP2Q8N6R1 65 aa12.95□□□□□ -0.34
COL18A1-202ENST00000355480 MUC22E2RYF6 1773 aaPredicted RBP12.95□□□□□ -0.34
COL18A1-202ENST00000355480 MRPL55Q7Z7F7 128 aaKnown RBP12.95□□□□□ -0.34
COL18A1-202ENST00000355480 NDUFC1O43677 76 aa12.94□□□□□ -0.34
COL18A1-202ENST00000355480 C10orf142B7Z368 130 aa12.94□□□□□ -0.34
COL18A1-202ENST00000355480 NTM-AS1Q6ZSK4 140 aa12.93□□□□□ -0.34
COL18A1-202ENST00000355480 LINC00694P0DN24 101 aa12.93□□□□□ -0.34
COL18A1-202ENST00000355480 COX6A2Q02221 97 aa12.93□□□□□ -0.34
COL18A1-202ENST00000355480 V9GYY9 64 aa12.93□□□□□ -0.34
COL18A1-202ENST00000355480 ATP5EP56381 51 aaPredicted RBP12.91□□□□□ -0.34
COL18A1-202ENST00000355480 IMUPQ9GZP8 106 aa12.91□□□□□ -0.34
COL18A1-202ENST00000355480 MYO9AB2RTY4 2548 aa12.91□□□□□ -0.34
COL18A1-202ENST00000355480 C1orf137Q5JT78 98 aa12.91□□□□□ -0.34
COL18A1-202ENST00000355480 PRR3P79522 188 aaKnown RBP12.9□□□□□ -0.34
COL18A1-202ENST00000355480 Q6ZVQ6 151 aa12.89□□□□□ -0.35
COL18A1-202ENST00000355480 ESRGQ1W209 222 aa12.89□□□□□ -0.35
COL18A1-202ENST00000355480 LINC01556Q5JQF7 62 aa12.89□□□□□ -0.35
COL18A1-202ENST00000355480 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
COL18A1-202ENST00000355480 Q8N814 137 aa12.88□□□□□ -0.35
COL18A1-202ENST00000355480 C1orf134Q5TEV5 83 aa12.87□□□□□ -0.35
COL18A1-202ENST00000355480 SRCAPQ6ZRS2 3230 aa12.87□□□□□ -0.35
COL18A1-202ENST00000355480 A6NED7 52 aa12.86□□□□□ -0.35
COL18A1-202ENST00000355480 Q6JHZ5 121 aa12.85□□□□□ -0.35
COL18A1-202ENST00000355480 ZNF580Q9UK33 172 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms