RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 C5orf38Q86SI9 138 aa9.82□□□□□ -0.84
VAPA-201ENST00000340541 ALKBH7Q9BT30 221 aaPredicted RBP9.82□□□□□ -0.84
VAPA-201ENST00000340541 CYSLTR1Q9Y271 337 aa9.82□□□□□ -0.84
VAPA-201ENST00000340541 IGHV3OR16-9A0A0B4J2B5 98 aa9.81□□□□□ -0.84
VAPA-201ENST00000340541 IFITM10A6NMD0 228 aa9.81□□□□□ -0.84
VAPA-201ENST00000340541 MT-ND6P03923 174 aa9.81□□□□□ -0.84
VAPA-201ENST00000340541 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
VAPA-201ENST00000340541 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
VAPA-201ENST00000340541 SVBPQ8N300 66 aa9.81□□□□□ -0.84
VAPA-201ENST00000340541 TGIF2-C20orf24A0A0A6YYL0 155 aa9.8□□□□□ -0.84
VAPA-201ENST00000340541 IGIPA6NJ69 53 aa9.8□□□□□ -0.84
VAPA-201ENST00000340541 SNAPINO95295 136 aa9.8□□□□□ -0.84
VAPA-201ENST00000340541 OXTP01178 125 aa9.8□□□□□ -0.84
VAPA-201ENST00000340541 KRTAP10-4P60372 401 aaPredicted RBP9.8□□□□□ -0.84
VAPA-201ENST00000340541 COX6A2Q02221 97 aa9.8□□□□□ -0.84
VAPA-201ENST00000340541 LINC00173Q6ZV60 143 aa9.8□□□□□ -0.84
VAPA-201ENST00000340541 TMEM141Q96I45 108 aa9.8□□□□□ -0.84
VAPA-201ENST00000340541 MRPL18Q9H0U6 180 aaKnown RBP9.8□□□□□ -0.84
VAPA-201ENST00000340541 LINC01546A6NGU7 62 aa9.79□□□□□ -0.84
VAPA-201ENST00000340541 MALP21145 153 aa9.79□□□□□ -0.84
VAPA-201ENST00000340541 NDUFA5Q16718 116 aa9.79□□□□□ -0.84
VAPA-201ENST00000340541 ZC2HC1BQ5TFG8 222 aa9.79□□□□□ -0.84
VAPA-201ENST00000340541 PRSS3P2Q8NHM4 247 aa9.79□□□□□ -0.84
VAPA-201ENST00000340541 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
VAPA-201ENST00000340541 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
VAPA-201ENST00000340541 ZNF561-AS1K7EIQ3 104 aa9.78□□□□□ -0.84
VAPA-201ENST00000340541 LINC00242Q5T6M2 205 aa9.78□□□□□ -0.84
VAPA-201ENST00000340541 CARD19Q96LW7 228 aa9.78□□□□□ -0.84
VAPA-201ENST00000340541 AMELXQ99217 191 aa9.78□□□□□ -0.84
VAPA-201ENST00000340541 NPSP0C0P6 89 aa9.77□□□□□ -0.85
VAPA-201ENST00000340541 UBE2D1P51668 147 aa9.77□□□□□ -0.85
VAPA-201ENST00000340541 SYCNQ0VAF6 134 aa9.77□□□□□ -0.85
VAPA-201ENST00000340541 FABP9Q0Z7S8 132 aa9.77□□□□□ -0.85
VAPA-201ENST00000340541 TEX43Q6ZNM6 134 aa9.77□□□□□ -0.85
VAPA-201ENST00000340541 TOMM6Q96B49 74 aa9.77□□□□□ -0.85
VAPA-201ENST00000340541 YPEL4Q96NS1 127 aa9.77□□□□□ -0.85
VAPA-201ENST00000340541 A0A087WYN8 130 aa9.76□□□□□ -0.85
VAPA-201ENST00000340541 A0A096LNI7 61 aa9.75□□□□□ -0.85
VAPA-201ENST00000340541 APOMO95445 188 aa9.75□□□□□ -0.85
VAPA-201ENST00000340541 Q6ZRU5 148 aa9.75□□□□□ -0.85
VAPA-201ENST00000340541 OR10D4PQ8NGN7 298 aa9.75□□□□□ -0.85
VAPA-201ENST00000340541 C2orf48Q96LS8 159 aa9.75□□□□□ -0.85
VAPA-201ENST00000340541 TIMM17AQ99595 171 aa9.75□□□□□ -0.85
VAPA-201ENST00000340541 A0A087WZ39 114 aa9.74□□□□□ -0.85
VAPA-201ENST00000340541 G0S2P27469 103 aa9.74□□□□□ -0.85
VAPA-201ENST00000340541 SPAG11BQ08648 103 aa9.74□□□□□ -0.85
VAPA-201ENST00000340541 Q6ZN92 141 aa9.74□□□□□ -0.85
VAPA-201ENST00000340541 VCX2Q9H322 139 aa9.74□□□□□ -0.85
VAPA-201ENST00000340541 PLAC8Q9NZF1 115 aa9.74□□□□□ -0.85
VAPA-201ENST00000340541 TRAPPC1Q9Y5R8 145 aa9.74□□□□□ -0.85
VAPA-201ENST00000340541 IGKV2-24A0A0C4DH68 120 aa9.73□□□□□ -0.85
VAPA-201ENST00000340541 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
VAPA-201ENST00000340541 ORAOV1Q8WV07 137 aa9.73□□□□□ -0.85
VAPA-201ENST00000340541 CAMK2N2Q96S95 79 aa9.73□□□□□ -0.85
VAPA-201ENST00000340541 C2orf88Q9BSF0 95 aa9.73□□□□□ -0.85
VAPA-201ENST00000340541 ERASQ7Z444 233 aa9.72□□□□□ -0.85
VAPA-201ENST00000340541 SLC7A5P1Q8MH63 180 aa9.72□□□□□ -0.85
VAPA-201ENST00000340541 C18orf32Q8TCD1 76 aa9.72□□□□□ -0.85
VAPA-201ENST00000340541 URB1-AS1Q96HZ7 61 aa9.72□□□□□ -0.85
VAPA-201ENST00000340541 KIAA0087Q14695 138 aa9.71□□□□□ -0.86
VAPA-201ENST00000340541 MAJINQ3KP22 176 aa9.71□□□□□ -0.86
VAPA-201ENST00000340541 FA2HQ7L5A8 372 aa9.71□□□□□ -0.86
VAPA-201ENST00000340541 DPH3Q96FX2 82 aa9.71□□□□□ -0.86
VAPA-201ENST00000340541 SCGB3A1Q96QR1 104 aa9.71□□□□□ -0.86
VAPA-201ENST00000340541 PAPPA-AS1Q5QFB9 102 aa9.7□□□□□ -0.86
VAPA-201ENST00000340541 LINC01561Q8N1V8 128 aa9.7□□□□□ -0.86
VAPA-201ENST00000340541 PKIGQ9Y2B9 76 aa9.7□□□□□ -0.86
VAPA-201ENST00000340541 A0A096LNJ9 63 aa9.69□□□□□ -0.86
VAPA-201ENST00000340541 F8WDY8 70 aa9.69□□□□□ -0.86
VAPA-201ENST00000340541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.69□□□□□ -0.86
VAPA-201ENST00000340541 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
VAPA-201ENST00000340541 RNF151Q2KHN1 245 aa9.69□□□□□ -0.86
VAPA-201ENST00000340541 C10orf25Q5T742 122 aa9.69□□□□□ -0.86
VAPA-201ENST00000340541 MRPL35Q9NZE8 188 aaKnown RBP9.69□□□□□ -0.86
VAPA-201ENST00000340541 PKHD1L1Q86WI1 4243 aa9.69□□□□□ -0.86
VAPA-201ENST00000340541 A0A0J9YXV3 536 aa9.68□□□□□ -0.86
VAPA-201ENST00000340541 LOC107984640A0A0U1RRK4 108 aa9.68□□□□□ -0.86
VAPA-201ENST00000340541 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
VAPA-201ENST00000340541 PTTG1IPP53801 180 aa9.68□□□□□ -0.86
VAPA-201ENST00000340541 CBLN2Q8IUK8 224 aa9.68□□□□□ -0.86
VAPA-201ENST00000340541 STPG4Q8N801 248 aa9.68□□□□□ -0.86
VAPA-201ENST00000340541 SMCO4Q9NRQ5 59 aa9.68□□□□□ -0.86
VAPA-201ENST00000340541 UNQ6190/PRO20217Q6UXQ8 127 aa9.67□□□□□ -0.86
VAPA-201ENST00000340541 LINC00474Q9P2X8 69 aa9.67□□□□□ -0.86
VAPA-201ENST00000340541 NDUFA1O15239 70 aa9.66□□□□□ -0.86
VAPA-201ENST00000340541 LINC00614P0C842 121 aa9.66□□□□□ -0.86
VAPA-201ENST00000340541 HNRNPA3P51991 378 aaKnown RBP9.66□□□□□ -0.86
VAPA-201ENST00000340541 HERVK_113P63121 156 aa9.66□□□□□ -0.86
VAPA-201ENST00000340541 C6orf48Q9UBA6 75 aa9.66□□□□□ -0.86
VAPA-201ENST00000340541 CDKN2A-AS1Q9UH64 79 aa9.66□□□□□ -0.86
VAPA-201ENST00000340541 SEC11AP67812 179 aa9.65□□□□□ -0.86
VAPA-201ENST00000340541 GAGE2BQ13066 116 aa9.65□□□□□ -0.86
VAPA-201ENST00000340541 CST9LQ9H4G1 147 aa9.65□□□□□ -0.86
VAPA-201ENST00000340541 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
VAPA-201ENST00000340541 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
VAPA-201ENST00000340541 IGLV5-45A0A087WSX0 123 aa9.63□□□□□ -0.87
VAPA-201ENST00000340541 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
VAPA-201ENST00000340541 TLX1NBP0CAT3 122 aa9.63□□□□□ -0.87
VAPA-201ENST00000340541 PMVKQ15126 192 aa9.63□□□□□ -0.87
VAPA-201ENST00000340541 PMCHL1Q16048 86 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms