RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 H0Y8G0 127 aa11.94□□□□□ -0.5
SDCBP2-201ENST00000339987 C1orf134Q5TEV5 83 aa11.94□□□□□ -0.5
SDCBP2-201ENST00000339987 KRTAP26-1Q6PEX3 210 aa11.94□□□□□ -0.5
SDCBP2-201ENST00000339987 SPATA12Q7Z6I5 190 aa11.94□□□□□ -0.5
SDCBP2-201ENST00000339987 LINC00242Q5T6M2 205 aa11.93□□□□□ -0.5
SDCBP2-201ENST00000339987 Q6ZRN7 208 aaPredicted RBP11.93□□□□□ -0.5
SDCBP2-201ENST00000339987 SACSQ9NZJ4 4579 aa11.93□□□□□ -0.5
SDCBP2-201ENST00000339987 SEC11AP67812 179 aa11.92□□□□□ -0.5
SDCBP2-201ENST00000339987 CD164L2Q6UWJ8 174 aa11.92□□□□□ -0.5
SDCBP2-201ENST00000339987 XCL1P47992 114 aa11.91□□□□□ -0.5
SDCBP2-201ENST00000339987 CHTOPQ9Y3Y2 248 aaKnown RBP11.91□□□□□ -0.5
SDCBP2-201ENST00000339987 A0A0J9YXV3 536 aa11.9□□□□□ -0.5
SDCBP2-201ENST00000339987 TINCRA0A1B0GVN0 87 aa11.9□□□□□ -0.5
SDCBP2-201ENST00000339987 GAGE12HA6NDE8 117 aa11.9□□□□□ -0.5
SDCBP2-201ENST00000339987 FOXI1Q12951 378 aa11.9□□□□□ -0.5
SDCBP2-201ENST00000339987 ODF1Q14990 250 aa11.9□□□□□ -0.5
SDCBP2-201ENST00000339987 VAMP8Q9BV40 100 aa11.9□□□□□ -0.5
SDCBP2-201ENST00000339987 F8VRH5 84 aa11.89□□□□□ -0.51
SDCBP2-201ENST00000339987 IGLC3P0DOY3 106 aa11.89□□□□□ -0.51
SDCBP2-201ENST00000339987 HERVK_113P63121 156 aa11.89□□□□□ -0.51
SDCBP2-201ENST00000339987 LINC01545Q5VT33 79 aa11.89□□□□□ -0.51
SDCBP2-201ENST00000339987 IGLV4-69A0A075B6H9 119 aa11.88□□□□□ -0.51
SDCBP2-201ENST00000339987 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
SDCBP2-201ENST00000339987 HSBP1L1C9JCN9 74 aa11.88□□□□□ -0.51
SDCBP2-201ENST00000339987 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
SDCBP2-201ENST00000339987 HYDINQ4G0P3 5121 aa11.88□□□□□ -0.51
SDCBP2-201ENST00000339987 PSCAO43653 123 aa11.87□□□□□ -0.51
SDCBP2-201ENST00000339987 COX6A2Q02221 97 aa11.87□□□□□ -0.51
SDCBP2-201ENST00000339987 CDPF1Q6NVV7 123 aa11.87□□□□□ -0.51
SDCBP2-201ENST00000339987 MRPL35Q9NZE8 188 aaKnown RBP11.87□□□□□ -0.51
SDCBP2-201ENST00000339987 IGLV5-45A0A087WSX0 123 aa11.86□□□□□ -0.51
SDCBP2-201ENST00000339987 TSTD3H0UI37 97 aa11.86□□□□□ -0.51
SDCBP2-201ENST00000339987 MAPKAPK5-AS1Q8N8E1 139 aa11.86□□□□□ -0.51
SDCBP2-201ENST00000339987 CHAC1Q9BUX1 264 aa11.86□□□□□ -0.51
SDCBP2-201ENST00000339987 C11orf86A6NJI1 115 aa11.85□□□□□ -0.51
SDCBP2-201ENST00000339987 COX7A2LO14548 114 aa11.85□□□□□ -0.51
SDCBP2-201ENST00000339987 RTL8CO15255 209 aa11.85□□□□□ -0.51
SDCBP2-201ENST00000339987 LINC01561Q8N1V8 128 aa11.85□□□□□ -0.51
SDCBP2-201ENST00000339987 A0A087WZ39 114 aa11.84□□□□□ -0.51
SDCBP2-201ENST00000339987 PLNP26678 52 aa11.84□□□□□ -0.51
SDCBP2-201ENST00000339987 C5orf38Q86SI9 138 aa11.84□□□□□ -0.51
SDCBP2-201ENST00000339987 CDKN2A-AS1Q9UH64 79 aa11.84□□□□□ -0.51
SDCBP2-201ENST00000339987 DPM2O94777 84 aa11.83□□□□□ -0.52
SDCBP2-201ENST00000339987 ATOH7Q8N100 152 aa11.83□□□□□ -0.52
SDCBP2-201ENST00000339987 LINC00469Q8N7U9 141 aa11.83□□□□□ -0.52
SDCBP2-201ENST00000339987 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
SDCBP2-201ENST00000339987 ZNF22P17026 224 aaPredicted RBP11.82□□□□□ -0.52
SDCBP2-201ENST00000339987 PMCHL2Q9BQD1 86 aa11.82□□□□□ -0.52
SDCBP2-201ENST00000339987 LRCOL1A6NCL2 159 aa11.81□□□□□ -0.52
SDCBP2-201ENST00000339987 SPATA45Q537H7 98 aa11.81□□□□□ -0.52
SDCBP2-201ENST00000339987 CFAP161Q6P656 301 aa11.81□□□□□ -0.52
SDCBP2-201ENST00000339987 IGHV1-58A0A0C4DH39 117 aa11.8□□□□□ -0.52
SDCBP2-201ENST00000339987 PCP4L1A6NKN8 68 aa11.8□□□□□ -0.52
SDCBP2-201ENST00000339987 H3BRM9 83 aa11.8□□□□□ -0.52
SDCBP2-201ENST00000339987 IGKCP01834 107 aa11.8□□□□□ -0.52
SDCBP2-201ENST00000339987 MALP21145 153 aa11.8□□□□□ -0.52
SDCBP2-201ENST00000339987 USP17L23D6RBM5 183 aa11.79□□□□□ -0.52
SDCBP2-201ENST00000339987 APOMO95445 188 aa11.79□□□□□ -0.52
SDCBP2-201ENST00000339987 TMEM170BQ5T4T1 132 aa11.79□□□□□ -0.52
SDCBP2-201ENST00000339987 C15orf56Q8N910 161 aa11.79□□□□□ -0.52
SDCBP2-201ENST00000339987 IGHV3-64A0A075B6Q5 118 aa11.78□□□□□ -0.52
SDCBP2-201ENST00000339987 LINC00336Q6ZUF6 198 aa11.78□□□□□ -0.52
SDCBP2-201ENST00000339987 WFDC2Q14508 124 aa11.77□□□□□ -0.52
SDCBP2-201ENST00000339987 A0A087WTM6 91 aa11.77□□□□□ -0.53
SDCBP2-201ENST00000339987 SMIM1B2RUZ4 78 aa11.77□□□□□ -0.53
SDCBP2-201ENST00000339987 TNP2Q05952 138 aa11.77□□□□□ -0.53
SDCBP2-201ENST00000339987 C14orf177Q52M58 125 aa11.77□□□□□ -0.53
SDCBP2-201ENST00000339987 PRO1933Q9H354 126 aa11.77□□□□□ -0.53
SDCBP2-201ENST00000339987 GVQW2A0A096LPI5 108 aaPredicted RBP11.76□□□□□ -0.53
SDCBP2-201ENST00000339987 TMEM223A0PJW6 202 aa11.76□□□□□ -0.53
SDCBP2-201ENST00000339987 LECT2O14960 151 aa11.76□□□□□ -0.53
SDCBP2-201ENST00000339987 DNAH2Q9P225 4427 aa11.76□□□□□ -0.53
SDCBP2-201ENST00000339987 SPINK8P0C7L1 97 aa11.75□□□□□ -0.53
SDCBP2-201ENST00000339987 ORAOV1Q8WV07 137 aa11.75□□□□□ -0.53
SDCBP2-201ENST00000339987 FRAS1Q86XX4 4008 aa11.74□□□□□ -0.53
SDCBP2-201ENST00000339987 DNAH10Q8IVF4 4471 aa11.74□□□□□ -0.53
SDCBP2-201ENST00000339987 IGLV5-39A0A0G2JS06 123 aa11.74□□□□□ -0.53
SDCBP2-201ENST00000339987 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
SDCBP2-201ENST00000339987 EREGO14944 169 aa11.73□□□□□ -0.53
SDCBP2-201ENST00000339987 HERVK_113P61574 105 aa11.72□□□□□ -0.53
SDCBP2-201ENST00000339987 SPAG11BQ08648 103 aa11.72□□□□□ -0.53
SDCBP2-201ENST00000339987 MAJINQ3KP22 176 aa11.72□□□□□ -0.53
SDCBP2-201ENST00000339987 HIGD2BQ4VC39 106 aa11.72□□□□□ -0.53
SDCBP2-201ENST00000339987 Q8N814 137 aa11.72□□□□□ -0.53
SDCBP2-201ENST00000339987 UQCR10Q9UDW1 63 aa11.72□□□□□ -0.53
SDCBP2-201ENST00000339987 DNAH17Q9UFH2 4485 aa11.72□□□□□ -0.53
SDCBP2-201ENST00000339987 ZNF561-AS1K7EIQ3 104 aa11.71□□□□□ -0.53
SDCBP2-201ENST00000339987 KIAA0087Q14695 138 aa11.71□□□□□ -0.53
SDCBP2-201ENST00000339987 Q8IZM0 81 aa11.71□□□□□ -0.53
SDCBP2-201ENST00000339987 DDTP30046 118 aa11.7□□□□□ -0.54
SDCBP2-201ENST00000339987 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
SDCBP2-201ENST00000339987 F8WDY8 70 aa11.69□□□□□ -0.54
SDCBP2-201ENST00000339987 PRSS2P07478 247 aa11.69□□□□□ -0.54
SDCBP2-201ENST00000339987 COX7B2Q8TF08 81 aa11.69□□□□□ -0.54
SDCBP2-201ENST00000339987 C2orf48Q96LS8 159 aa11.69□□□□□ -0.54
SDCBP2-201ENST00000339987 NTN5Q8WTR8 489 aaPredicted RBP11.69□□□□□ -0.54
SDCBP2-201ENST00000339987 TOMM7Q9P0U1 55 aa11.69□□□□□ -0.54
SDCBP2-201ENST00000339987 STPG4Q8N801 248 aa11.68□□□□□ -0.54
SDCBP2-201ENST00000339987 E9PLD3 99 aa11.67□□□□□ -0.54
SDCBP2-201ENST00000339987 LEPROTO15243 131 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms