RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 COX7A2LO14548 114 aa9.61□□□□□ -0.87
LINC01116-202ENST00000339037 MRPL54Q6P161 138 aaKnown RBP9.61□□□□□ -0.87
LINC01116-202ENST00000339037 TRBV24-1A0A075B6N3 115 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 LOC100996750A0A140TA64 210 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 A0A1B0GW15 77 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 A0A1W2PNN7 141 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 LINC00862A6NCI5 91 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 APOMO95445 188 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 CKS2P33552 79 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 CAMK2N2Q96S95 79 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 KRTAP4-6Q9BYQ5 205 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 SMDT1Q9H4I9 107 aa9.6□□□□□ -0.87
LINC01116-202ENST00000339037 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
LINC01116-202ENST00000339037 A0A1B0GXF2 115 aa9.59□□□□□ -0.87
LINC01116-202ENST00000339037 TNFRSF6BO95407 300 aa9.59□□□□□ -0.87
LINC01116-202ENST00000339037 MT-ND6P03923 174 aa9.59□□□□□ -0.87
LINC01116-202ENST00000339037 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
LINC01116-202ENST00000339037 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.87
LINC01116-202ENST00000339037 C20orf78Q9BR46 151 aa9.59□□□□□ -0.87
LINC01116-202ENST00000339037 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
LINC01116-202ENST00000339037 D6R8Y8 96 aa9.58□□□□□ -0.88
LINC01116-202ENST00000339037 NPYP01303 97 aa9.58□□□□□ -0.88
LINC01116-202ENST00000339037 RPL32P62910 135 aaKnown RBP9.58□□□□□ -0.88
LINC01116-202ENST00000339037 HBBP68871 147 aa9.58□□□□□ -0.88
LINC01116-202ENST00000339037 C9orf116Q5BN46 136 aaPredicted RBP9.58□□□□□ -0.88
LINC01116-202ENST00000339037 FAM104AQ969W3 186 aa9.58□□□□□ -0.88
LINC01116-202ENST00000339037 TIMM21Q9BVV7 248 aa9.58□□□□□ -0.88
LINC01116-202ENST00000339037 SMIM2Q9BVW6 85 aa9.58□□□□□ -0.88
LINC01116-202ENST00000339037 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.57□□□□□ -0.88
LINC01116-202ENST00000339037 RPL18AQ02543 176 aaKnown RBP9.57□□□□□ -0.88
LINC01116-202ENST00000339037 TMEM18Q96B42 140 aa9.57□□□□□ -0.88
LINC01116-202ENST00000339037 C1orf137Q5JT78 98 aa9.56□□□□□ -0.88
LINC01116-202ENST00000339037 C5orf38Q86SI9 138 aa9.56□□□□□ -0.88
LINC01116-202ENST00000339037 C2orf48Q96LS8 159 aa9.56□□□□□ -0.88
LINC01116-202ENST00000339037 MUC2Q02817 5179 aa9.55□□□□□ -0.88
LINC01116-202ENST00000339037 F8W036 122 aa9.55□□□□□ -0.88
LINC01116-202ENST00000339037 S100A8P05109 93 aa9.55□□□□□ -0.88
LINC01116-202ENST00000339037 OPRPNQ99935 248 aaPredicted RBP9.55□□□□□ -0.88
LINC01116-202ENST00000339037 TCAPO15273 167 aa9.54□□□□□ -0.88
LINC01116-202ENST00000339037 SPAG11BQ08648 103 aa9.54□□□□□ -0.88
LINC01116-202ENST00000339037 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
LINC01116-202ENST00000339037 SVIPQ8NHG7 77 aa9.54□□□□□ -0.88
LINC01116-202ENST00000339037 SPANXA1Q9NS26 97 aa9.53□□□□□ -0.88
LINC01116-202ENST00000339037 PPBPP02775 128 aa9.52□□□□□ -0.89
LINC01116-202ENST00000339037 DIRC1Q969H9 104 aa9.52□□□□□ -0.89
LINC01116-202ENST00000339037 MRPS36P82909 103 aaKnown RBP9.51□□□□□ -0.89
LINC01116-202ENST00000339037 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
LINC01116-202ENST00000339037 ORMDL3Q8N138 153 aa9.51□□□□□ -0.89
LINC01116-202ENST00000339037 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
LINC01116-202ENST00000339037 OR10D4PQ8NGN7 298 aa9.51□□□□□ -0.89
LINC01116-202ENST00000339037 IGHV3OR16-9A0A0B4J2B5 98 aa9.5□□□□□ -0.89
LINC01116-202ENST00000339037 IGLV7-43P04211 117 aa9.5□□□□□ -0.89
LINC01116-202ENST00000339037 TMEM136Q6ZRR5 245 aa9.5□□□□□ -0.89
LINC01116-202ENST00000339037 PRELID3AQ96N28 172 aa9.5□□□□□ -0.89
LINC01116-202ENST00000339037 A0A087WZ39 114 aa9.49□□□□□ -0.89
LINC01116-202ENST00000339037 IFITM10A6NMD0 228 aa9.49□□□□□ -0.89
LINC01116-202ENST00000339037 ORAOV1Q8WV07 137 aa9.49□□□□□ -0.89
LINC01116-202ENST00000339037 IMMP2LQ96T52 175 aa9.49□□□□□ -0.89
LINC01116-202ENST00000339037 MRPL35Q9NZE8 188 aaKnown RBP9.49□□□□□ -0.89
LINC01116-202ENST00000339037 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
LINC01116-202ENST00000339037 F8WDY8 70 aa9.47□□□□□ -0.89
LINC01116-202ENST00000339037 H0Y9J4 135 aa9.47□□□□□ -0.89
LINC01116-202ENST00000339037 NDUFA1O15239 70 aa9.47□□□□□ -0.89
LINC01116-202ENST00000339037 RAB5AP20339 215 aa9.47□□□□□ -0.89
LINC01116-202ENST00000339037 IFI27P40305 119 aaPredicted RBP9.47□□□□□ -0.89
LINC01116-202ENST00000339037 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.9
LINC01116-202ENST00000339037 LOC389332A0A1B0GUA5 103 aa9.46□□□□□ -0.9
LINC01116-202ENST00000339037 B5MCH6 92 aa9.46□□□□□ -0.9
LINC01116-202ENST00000339037 PNRC1Q12796 327 aaPredicted RBP9.46□□□□□ -0.9
LINC01116-202ENST00000339037 C10orf25Q5T742 122 aa9.46□□□□□ -0.9
LINC01116-202ENST00000339037 PRSS47A8MTI9 375 aa9.45□□□□□ -0.9
LINC01116-202ENST00000339037 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
LINC01116-202ENST00000339037 KRTAP11-1Q8IUC1 163 aa9.45□□□□□ -0.9
LINC01116-202ENST00000339037 PYGO1Q9Y3Y4 419 aa9.45□□□□□ -0.9
LINC01116-202ENST00000339037 IGLV1-50A0A075B6I6 118 aa9.44□□□□□ -0.9
LINC01116-202ENST00000339037 TGIF2-C20orf24A0A0A6YYL0 155 aa9.44□□□□□ -0.9
LINC01116-202ENST00000339037 MT-ND4LP03901 98 aa9.44□□□□□ -0.9
LINC01116-202ENST00000339037 TLX1NBP0CAT3 122 aa9.44□□□□□ -0.9
LINC01116-202ENST00000339037 LINC00242Q5T6M2 205 aa9.44□□□□□ -0.9
LINC01116-202ENST00000339037 UNQ6190/PRO20217Q6UXQ8 127 aa9.44□□□□□ -0.9
LINC01116-202ENST00000339037 TMEM141Q96I45 108 aa9.44□□□□□ -0.9
LINC01116-202ENST00000339037 MAP1LC3AQ9H492 121 aa9.44□□□□□ -0.9
LINC01116-202ENST00000339037 LAMTOR2Q9Y2Q5 125 aa9.44□□□□□ -0.9
LINC01116-202ENST00000339037 C6orf48Q9UBA6 75 aa9.43□□□□□ -0.9
LINC01116-202ENST00000339037 RAB14P61106 215 aa9.42□□□□□ -0.9
LINC01116-202ENST00000339037 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
LINC01116-202ENST00000339037 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
LINC01116-202ENST00000339037 ZC2HC1BQ5TFG8 222 aa9.42□□□□□ -0.9
LINC01116-202ENST00000339037 Q8N8P6 123 aa9.42□□□□□ -0.9
LINC01116-202ENST00000339037 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
LINC01116-202ENST00000339037 M0QXV9 152 aa9.41□□□□□ -0.9
LINC01116-202ENST00000339037 KRTAP1-4P0C5Y4 121 aa9.41□□□□□ -0.9
LINC01116-202ENST00000339037 UBE2BP63146 152 aa9.41□□□□□ -0.9
LINC01116-202ENST00000339037 C2orf66Q6UXQ4 117 aa9.41□□□□□ -0.9
LINC01116-202ENST00000339037 TEX43Q6ZNM6 134 aa9.41□□□□□ -0.9
LINC01116-202ENST00000339037 LINC00173Q6ZV60 143 aa9.41□□□□□ -0.9
LINC01116-202ENST00000339037 CYSLTR1Q9Y271 337 aa9.41□□□□□ -0.9
LINC01116-202ENST00000339037 UBE2D1P51668 147 aa9.4□□□□□ -0.9
LINC01116-202ENST00000339037 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
LINC01116-202ENST00000339037 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms