RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CSDC2Q9Y534 153 aaKnown RBP9.13□□□□□ -0.95
CTHRC1-201ENST00000330295 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
CTHRC1-201ENST00000330295 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.12□□□□□ -0.95
CTHRC1-201ENST00000330295 hDV102S1A0JD36 115 aa9.12□□□□□ -0.95
CTHRC1-201ENST00000330295 CCL25O15444 150 aa9.12□□□□□ -0.95
CTHRC1-201ENST00000330295 NPYP01303 97 aa9.12□□□□□ -0.95
CTHRC1-201ENST00000330295 CNBPP62633 177 aaKnown RBP9.12□□□□□ -0.95
CTHRC1-201ENST00000330295 ADCYAP1P18509 176 aa9.11□□□□□ -0.95
CTHRC1-201ENST00000330295 TIMM21Q9BVV7 248 aa9.11□□□□□ -0.95
CTHRC1-201ENST00000330295 MAP1LC3AQ9H492 121 aa9.11□□□□□ -0.95
CTHRC1-201ENST00000330295 CDC42SE2Q9NRR3 84 aa9.11□□□□□ -0.95
CTHRC1-201ENST00000330295 LINC00959A0A1B0GUT2 108 aa9.1□□□□□ -0.95
CTHRC1-201ENST00000330295 C1orf196B1AJZ1 125 aa9.1□□□□□ -0.95
CTHRC1-201ENST00000330295 XCL1P47992 114 aa9.1□□□□□ -0.95
CTHRC1-201ENST00000330295 PSORS1C2Q9UIG4 136 aa9.1□□□□□ -0.95
CTHRC1-201ENST00000330295 RHEBQ15382 184 aa9.09□□□□□ -0.95
CTHRC1-201ENST00000330295 NDUFA5Q16718 116 aa9.09□□□□□ -0.95
CTHRC1-201ENST00000330295 SPANXA1Q9NS26 97 aa9.09□□□□□ -0.95
CTHRC1-201ENST00000330295 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
CTHRC1-201ENST00000330295 COX19Q49B96 90 aa9.08□□□□□ -0.96
CTHRC1-201ENST00000330295 LOC389332A0A1B0GUA5 103 aa9.07□□□□□ -0.96
CTHRC1-201ENST00000330295 KRTAP9-7A8MTY7 169 aa9.07□□□□□ -0.96
CTHRC1-201ENST00000330295 G0S2P27469 103 aa9.07□□□□□ -0.96
CTHRC1-201ENST00000330295 CD164L2Q6UWJ8 174 aa9.07□□□□□ -0.96
CTHRC1-201ENST00000330295 RPS10P5Q9NQ39 176 aa9.07□□□□□ -0.96
CTHRC1-201ENST00000330295 CARHSP1Q9Y2V2 147 aaKnown RBP9.07□□□□□ -0.96
CTHRC1-201ENST00000330295 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
CTHRC1-201ENST00000330295 IGHV1-58A0A0C4DH39 117 aa9.06□□□□□ -0.96
CTHRC1-201ENST00000330295 PRSS47A8MTI9 375 aa9.06□□□□□ -0.96
CTHRC1-201ENST00000330295 K7EMI3 77 aa9.06□□□□□ -0.96
CTHRC1-201ENST00000330295 MALP21145 153 aa9.06□□□□□ -0.96
CTHRC1-201ENST00000330295 FOXI1Q12951 378 aa9.06□□□□□ -0.96
CTHRC1-201ENST00000330295 C10orf91Q5T1B1 145 aa9.06□□□□□ -0.96
CTHRC1-201ENST00000330295 NXT2Q9NPJ8 142 aaKnown RBP9.06□□□□□ -0.96
CTHRC1-201ENST00000330295 COX7A2LO14548 114 aa9.05□□□□□ -0.96
CTHRC1-201ENST00000330295 IFI27P40305 119 aaPredicted RBP9.05□□□□□ -0.96
CTHRC1-201ENST00000330295 ORMDL2Q53FV1 153 aa9.05□□□□□ -0.96
CTHRC1-201ENST00000330295 LCE3BQ5TA77 95 aa9.05□□□□□ -0.96
CTHRC1-201ENST00000330295 Q8N8P6 123 aa9.05□□□□□ -0.96
CTHRC1-201ENST00000330295 PKIGQ9Y2B9 76 aa9.05□□□□□ -0.96
CTHRC1-201ENST00000330295 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
CTHRC1-201ENST00000330295 MRPS36P82909 103 aaKnown RBP9.04□□□□□ -0.96
CTHRC1-201ENST00000330295 MAJINQ3KP22 176 aa9.04□□□□□ -0.96
CTHRC1-201ENST00000330295 Q6ZRP5 223 aa9.04□□□□□ -0.96
CTHRC1-201ENST00000330295 STPG4Q8N801 248 aa9.04□□□□□ -0.96
CTHRC1-201ENST00000330295 KRTAP4-12Q9BQ66 201 aa9.04□□□□□ -0.96
CTHRC1-201ENST00000330295 GNB1LQ9BYB4 327 aa9.04□□□□□ -0.96
CTHRC1-201ENST00000330295 GVQW2A0A096LPI5 108 aaPredicted RBP9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 ZNF561-AS1K7EIQ3 104 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 APOMO95445 188 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 MT-ND6P03923 174 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 SLPIP03973 132 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 HIGD2BQ4VC39 106 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 Q6ZUT4 128 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 SVBPQ8N300 66 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 PRR26Q8N8Z3 221 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 C15orf56Q8N910 161 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 CYSLTR1Q9Y271 337 aa9.03□□□□□ -0.96
CTHRC1-201ENST00000330295 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
CTHRC1-201ENST00000330295 SNAPINO95295 136 aa9.02□□□□□ -0.97
CTHRC1-201ENST00000330295 APOC3P02656 99 aa9.02□□□□□ -0.97
CTHRC1-201ENST00000330295 RNASE13Q5GAN3 156 aaKnown RBP9.02□□□□□ -0.97
CTHRC1-201ENST00000330295 Q6ZN92 141 aa9.02□□□□□ -0.97
CTHRC1-201ENST00000330295 PYGO1Q9Y3Y4 419 aa9.02□□□□□ -0.97
CTHRC1-201ENST00000330295 COX6A2Q02221 97 aa9.01□□□□□ -0.97
CTHRC1-201ENST00000330295 PAPPA-AS1Q5QFB9 102 aa9.01□□□□□ -0.97
CTHRC1-201ENST00000330295 PRSS3P2Q8NHM4 247 aa9.01□□□□□ -0.97
CTHRC1-201ENST00000330295 C2orf88Q9BSF0 95 aa9.01□□□□□ -0.97
CTHRC1-201ENST00000330295 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
CTHRC1-201ENST00000330295 FABP9Q0Z7S8 132 aa9□□□□□ -0.97
CTHRC1-201ENST00000330295 KIAA1644Q3SXP7 199 aa9□□□□□ -0.97
CTHRC1-201ENST00000330295 TMEM141Q96I45 108 aa9□□□□□ -0.97
CTHRC1-201ENST00000330295 MUC17Q685J3 4493 aa8.99□□□□□ -0.97
CTHRC1-201ENST00000330295 LINC01549A6NIU2 74 aa8.99□□□□□ -0.97
CTHRC1-201ENST00000330295 C2orf66Q6UXQ4 117 aa8.99□□□□□ -0.97
CTHRC1-201ENST00000330295 TEX43Q6ZNM6 134 aa8.99□□□□□ -0.97
CTHRC1-201ENST00000330295 TGIF2-C20orf24A0A0A6YYL0 155 aa8.98□□□□□ -0.97
CTHRC1-201ENST00000330295 NPSP0C0P6 89 aa8.98□□□□□ -0.97
CTHRC1-201ENST00000330295 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
CTHRC1-201ENST00000330295 OPRPNQ99935 248 aaPredicted RBP8.98□□□□□ -0.97
CTHRC1-201ENST00000330295 VCX2Q9H322 139 aa8.98□□□□□ -0.97
CTHRC1-201ENST00000330295 SYCNQ0VAF6 134 aa8.97□□□□□ -0.97
CTHRC1-201ENST00000330295 CARD19Q96LW7 228 aa8.97□□□□□ -0.97
CTHRC1-201ENST00000330295 MRPL18Q9H0U6 180 aaKnown RBP8.97□□□□□ -0.97
CTHRC1-201ENST00000330295 LINC00474Q9P2X8 69 aa8.97□□□□□ -0.97
CTHRC1-201ENST00000330295 IGLV4-3A0A075B6K6 122 aa8.96□□□□□ -0.98
CTHRC1-201ENST00000330295 FA2HQ7L5A8 372 aa8.96□□□□□ -0.98
CTHRC1-201ENST00000330295 ALKBH7Q9BT30 221 aaPredicted RBP8.96□□□□□ -0.98
CTHRC1-201ENST00000330295 SMCO4Q9NRQ5 59 aa8.96□□□□□ -0.98
CTHRC1-201ENST00000330295 OR10D4PQ8NGN7 298 aa8.95□□□□□ -0.98
CTHRC1-201ENST00000330295 CAMK2N2Q96S95 79 aa8.95□□□□□ -0.98
CTHRC1-201ENST00000330295 TRAPPC1Q9Y5R8 145 aa8.95□□□□□ -0.98
CTHRC1-201ENST00000330295 IGLV4-69A0A075B6H9 119 aa8.94□□□□□ -0.98
CTHRC1-201ENST00000330295 F8WDY8 70 aa8.94□□□□□ -0.98
CTHRC1-201ENST00000330295 SEC11AP67812 179 aa8.94□□□□□ -0.98
CTHRC1-201ENST00000330295 SPAG11BQ08648 103 aa8.94□□□□□ -0.98
CTHRC1-201ENST00000330295 C2orf48Q96LS8 159 aa8.94□□□□□ -0.98
CTHRC1-201ENST00000330295 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
CTHRC1-201ENST00000330295 LINC01547P58512 204 aaPredicted RBP8.93□□□□□ -0.98
CTHRC1-201ENST00000330295 TOMM6Q96B49 74 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms