RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 K7EQD1 137 aa9.01□□□□□ -0.97
CCDC60-201ENST00000327554 GHRHP01286 108 aa9.01□□□□□ -0.97
CCDC60-201ENST00000327554 TOMM7Q9P0U1 55 aa9.01□□□□□ -0.97
CCDC60-201ENST00000327554 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
CCDC60-201ENST00000327554 INSP01308 110 aa9□□□□□ -0.97
CCDC60-201ENST00000327554 WFDC9Q8NEX5 89 aa9□□□□□ -0.97
CCDC60-201ENST00000327554 ORMDL1Q9P0S3 153 aa9□□□□□ -0.97
CCDC60-201ENST00000327554 ATRXP46100 2492 aa9□□□□□ -0.97
CCDC60-201ENST00000327554 TRBV10-1A0A0K0K1A3 114 aa9□□□□□ -0.97
CCDC60-201ENST00000327554 NDUFC2O95298 119 aa9□□□□□ -0.97
CCDC60-201ENST00000327554 C10orf105Q8TEF2 133 aa9□□□□□ -0.97
CCDC60-201ENST00000327554 IL17DQ8TAD2 202 aa8.99□□□□□ -0.97
CCDC60-201ENST00000327554 MAP6D1Q9H9H5 199 aa8.99□□□□□ -0.97
CCDC60-201ENST00000327554 TRAV23DV6A0A075B6W5 121 aa8.99□□□□□ -0.97
CCDC60-201ENST00000327554 LY6G6DO95868 133 aa8.99□□□□□ -0.97
CCDC60-201ENST00000327554 CREBBPQ92793 2442 aa8.99□□□□□ -0.97
CCDC60-201ENST00000327554 TRGV1A0A0A0MS02 117 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 IBA57-AS1B1ANH7 110 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 SLURP1P55000 103 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 ATP5EP2Q5VTU8 51 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 LYPD5Q6UWN5 251 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 FAM19A1Q7Z5A9 133 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 LINC00167Q96N53 147 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 MSMBP08118 114 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 S100A7L2Q5SY68 101 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 TMEM243Q9BU79 118 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 CSPG4Q6UVK1 2322 aa8.98□□□□□ -0.97
CCDC60-201ENST00000327554 TRBV6-4A0A1B0GX49 114 aa8.97□□□□□ -0.97
CCDC60-201ENST00000327554 UBE2E2Q96LR5 201 aa8.97□□□□□ -0.97
CCDC60-201ENST00000327554 C19orf84I3L1E1 186 aa8.97□□□□□ -0.97
CCDC60-201ENST00000327554 UBE2L6O14933 153 aa8.97□□□□□ -0.97
CCDC60-201ENST00000327554 PAX4O43316 350 aa8.97□□□□□ -0.97
CCDC60-201ENST00000327554 DEFB112Q30KQ8 113 aa8.97□□□□□ -0.97
CCDC60-201ENST00000327554 PFN2P35080 140 aa8.96□□□□□ -0.97
CCDC60-201ENST00000327554 DEFB136Q30KP8 78 aa8.96□□□□□ -0.97
CCDC60-201ENST00000327554 ENHOQ6UWT2 76 aa8.96□□□□□ -0.97
CCDC60-201ENST00000327554 XCL2Q9UBD3 114 aa8.96□□□□□ -0.97
CCDC60-201ENST00000327554 EPM2AB3EWF7 344 aa8.96□□□□□ -0.98
CCDC60-201ENST00000327554 Q6ZTI0 123 aa8.96□□□□□ -0.98
CCDC60-201ENST00000327554 C18orf65Q6ZTR6 163 aa8.96□□□□□ -0.98
CCDC60-201ENST00000327554 IGHV4-30-2A0A087WSY4 118 aa8.95□□□□□ -0.98
CCDC60-201ENST00000327554 IGHV3OR16-9A0A0B4J2B5 98 aa8.95□□□□□ -0.98
CCDC60-201ENST00000327554 C1orf158Q8N1D5 194 aa8.95□□□□□ -0.98
CCDC60-201ENST00000327554 C20orf197Q8N268 126 aa8.95□□□□□ -0.98
CCDC60-201ENST00000327554 JMJD7-PLA2G4BH0Y9G9 81 aa8.95□□□□□ -0.98
CCDC60-201ENST00000327554 MAP1AP78559 2803 aaPredicted RBP8.95□□□□□ -0.98
CCDC60-201ENST00000327554 XCL1P47992 114 aa8.94□□□□□ -0.98
CCDC60-201ENST00000327554 IGKV3OR2-268A0A0C4DH90 116 aa8.94□□□□□ -0.98
CCDC60-201ENST00000327554 FAM236DA0A1B0GTK5 79 aa8.94□□□□□ -0.98
CCDC60-201ENST00000327554 FAM236CP0DP71 79 aa8.94□□□□□ -0.98
CCDC60-201ENST00000327554 TRBV10-3A0A0K0K1G6 114 aa8.93□□□□□ -0.98
CCDC60-201ENST00000327554 CELSR2Q9HCU4 2923 aa8.93□□□□□ -0.98
CCDC60-201ENST00000327554 A0A096LNT2 108 aa8.93□□□□□ -0.98
CCDC60-201ENST00000327554 UCNP55089 124 aa8.93□□□□□ -0.98
CCDC60-201ENST00000327554 NANOS2P60321 138 aaKnown RBP8.93□□□□□ -0.98
CCDC60-201ENST00000327554 IGLV4-60A0A075B6I1 120 aa8.92□□□□□ -0.98
CCDC60-201ENST00000327554 A0A087WZ39 114 aa8.92□□□□□ -0.98
CCDC60-201ENST00000327554 Q8N814 137 aa8.92□□□□□ -0.98
CCDC60-201ENST00000327554 H7BZZ5 65 aa8.92□□□□□ -0.98
CCDC60-201ENST00000327554 MRAPQ8TCY5 172 aa8.92□□□□□ -0.98
CCDC60-201ENST00000327554 ZNF702PQ9H963 129 aa8.92□□□□□ -0.98
CCDC60-201ENST00000327554 CSMD2Q7Z408 3487 aa8.91□□□□□ -0.98
CCDC60-201ENST00000327554 LOC100131303A0A0U1RQF7 123 aa8.91□□□□□ -0.98
CCDC60-201ENST00000327554 C2CD3Q4AC94 2353 aa8.91□□□□□ -0.98
CCDC60-201ENST00000327554 TMEM256-PLSCR3K7ERE1 68 aa8.9□□□□□ -0.98
CCDC60-201ENST00000327554 NBL1P41271 181 aa8.9□□□□□ -0.98
CCDC60-201ENST00000327554 SERP1Q9Y6X1 66 aa8.9□□□□□ -0.98
CCDC60-201ENST00000327554 DEFB114Q30KQ6 69 aa8.89□□□□□ -0.99
CCDC60-201ENST00000327554 ODF3L2Q3SX64 289 aa8.89□□□□□ -0.99
CCDC60-201ENST00000327554 CCL19Q99731 98 aa8.89□□□□□ -0.99
CCDC60-201ENST00000327554 UBL5Q9BZL1 73 aa8.89□□□□□ -0.99
CCDC60-201ENST00000327554 B4DSR2 109 aa8.89□□□□□ -0.99
CCDC60-201ENST00000327554 DYNLRB2Q8TF09 96 aa8.89□□□□□ -0.99
CCDC60-201ENST00000327554 C11orf68Q9H3H3 251 aaKnown RBP8.89□□□□□ -0.99
CCDC60-201ENST00000327554 TRAV7A0A075B6U4 112 aa8.88□□□□□ -0.99
CCDC60-201ENST00000327554 IGF2RP11717 2491 aa8.88□□□□□ -0.99
CCDC60-201ENST00000327554 BCE1O60756 84 aa8.88□□□□□ -0.99
CCDC60-201ENST00000327554 PRR3P79522 188 aaKnown RBP8.88□□□□□ -0.99
CCDC60-201ENST00000327554 NOP10Q9NPE3 64 aaKnown RBP8.88□□□□□ -0.99
CCDC60-201ENST00000327554 C6orf226Q5I0X4 101 aa8.86□□□□□ -0.99
CCDC60-201ENST00000327554 LINC00336Q6ZUF6 198 aa8.86□□□□□ -0.99
CCDC60-201ENST00000327554 STHQ8IWL8 128 aa8.86□□□□□ -0.99
CCDC60-201ENST00000327554 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
CCDC60-201ENST00000327554 TMEM86BQ8N661 226 aa8.86□□□□□ -0.99
CCDC60-201ENST00000327554 TRBV6-8A0A0A6YYG3 113 aa8.85□□□□□ -0.99
CCDC60-201ENST00000327554 Q6ZQT0 140 aa8.85□□□□□ -0.99
CCDC60-201ENST00000327554 LINC00959A0A1B0GUT2 108 aa8.85□□□□□ -0.99
CCDC60-201ENST00000327554 LINC00482Q8N8I6 264 aa8.85□□□□□ -0.99
CCDC60-201ENST00000327554 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
CCDC60-201ENST00000327554 NOTCH3Q9UM47 2321 aa8.85□□□□□ -0.99
CCDC60-201ENST00000327554 PLAC8L1A1L4L8 177 aa8.84□□□□□ -0.99
CCDC60-201ENST00000327554 M0R2N4 97 aa8.83□□□□□ -1
CCDC60-201ENST00000327554 C16orf95Q9H693 158 aa8.83□□□□□ -1
CCDC60-201ENST00000327554 TRAV10A0A0B4J240 114 aa8.83□□□□□ -1
CCDC60-201ENST00000327554 SPG11Q96JI7 2443 aa8.83□□□□□ -1
CCDC60-201ENST00000327554 RNASE1P07998 156 aaKnown RBP8.82□□□□□ -1
CCDC60-201ENST00000327554 LINC01547P58512 204 aaPredicted RBP8.82□□□□□ -1
CCDC60-201ENST00000327554 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
CCDC60-201ENST00000327554 Q8IZM0 81 aa8.82□□□□□ -1
CCDC60-201ENST00000327554 TRGV2A0A075B6R0 118 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms