RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 C2orf66Q6UXQ4 117 aa9.06□□□□□ -0.96
DDX39A-202ENST00000324340 C15orf53Q8NAA6 179 aa9.06□□□□□ -0.96
DDX39A-202ENST00000324340 DNAJC30Q96LL9 226 aa9.06□□□□□ -0.96
DDX39A-202ENST00000324340 TIMM17AQ99595 171 aa9.06□□□□□ -0.96
DDX39A-202ENST00000324340 NACAE9PAV3 2078 aa9.06□□□□□ -0.96
DDX39A-202ENST00000324340 DNAH3Q8TD57 4116 aa9.06□□□□□ -0.96
DDX39A-202ENST00000324340 F5H697 171 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 M0QY20 66 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 EMP1P54849 157 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 PMVKQ15126 192 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 ZNF56Q15929 161 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 MEIG1Q5JSS6 88 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 TMEM170BQ5T4T1 132 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 UBE2WQ96B02 151 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 KIR2DL4Q99706 377 aa9.05□□□□□ -0.96
DDX39A-202ENST00000324340 IGHV3-53P01767 116 aa9.04□□□□□ -0.96
DDX39A-202ENST00000324340 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
DDX39A-202ENST00000324340 TM2D3Q9BRN9 247 aa9.04□□□□□ -0.96
DDX39A-202ENST00000324340 RETNQ9HD89 108 aa9.04□□□□□ -0.96
DDX39A-202ENST00000324340 TRGV2A0A075B6R0 118 aa9.03□□□□□ -0.96
DDX39A-202ENST00000324340 TRBV6-5A0A0K0K1A5 114 aa9.03□□□□□ -0.96
DDX39A-202ENST00000324340 A0A1B0GX51 115 aa9.03□□□□□ -0.96
DDX39A-202ENST00000324340 SDHAF1A6NFY7 115 aa9.03□□□□□ -0.96
DDX39A-202ENST00000324340 NTN5Q8WTR8 489 aaPredicted RBP9.03□□□□□ -0.96
DDX39A-202ENST00000324340 RPL39LQ96EH5 51 aaKnown RBP9.03□□□□□ -0.96
DDX39A-202ENST00000324340 TMEM101Q96IK0 257 aa9.03□□□□□ -0.96
DDX39A-202ENST00000324340 C11orf68Q9H3H3 251 aaKnown RBP9.03□□□□□ -0.96
DDX39A-202ENST00000324340 IGHV3-73A0A0B4J1V6 119 aa9.02□□□□□ -0.97
DDX39A-202ENST00000324340 LEPROTO15243 131 aa9.02□□□□□ -0.97
DDX39A-202ENST00000324340 C5orf47Q569G3 176 aa9.02□□□□□ -0.97
DDX39A-202ENST00000324340 Q6ZSN1 163 aa9.02□□□□□ -0.97
DDX39A-202ENST00000324340 IGLV4-69A0A075B6H9 119 aa9.01□□□□□ -0.97
DDX39A-202ENST00000324340 DEFB4AO15263 64 aa9.01□□□□□ -0.97
DDX39A-202ENST00000324340 SPART-AS1P0CW21 52 aa9.01□□□□□ -0.97
DDX39A-202ENST00000324340 LGALS3P17931 250 aaKnown RBP9.01□□□□□ -0.97
DDX39A-202ENST00000324340 RPS28P62857 69 aaKnown RBP9.01□□□□□ -0.97
DDX39A-202ENST00000324340 AMELXQ99217 191 aa9.01□□□□□ -0.97
DDX39A-202ENST00000324340 IGIPA6NJ69 53 aa9□□□□□ -0.97
DDX39A-202ENST00000324340 J3QQQ9 107 aa9□□□□□ -0.97
DDX39A-202ENST00000324340 COX6CP09669 75 aa9□□□□□ -0.97
DDX39A-202ENST00000324340 DEFB130BP0DP73 79 aa9□□□□□ -0.97
DDX39A-202ENST00000324340 DEFB130AP0DP74 79 aa9□□□□□ -0.97
DDX39A-202ENST00000324340 TRBV10-1A0A0K0K1A3 114 aa8.99□□□□□ -0.97
DDX39A-202ENST00000324340 POLR2KP53803 58 aaKnown RBP8.99□□□□□ -0.97
DDX39A-202ENST00000324340 FHL2Q14192 279 aa8.99□□□□□ -0.97
DDX39A-202ENST00000324340 CELA1Q9UNI1 258 aa8.99□□□□□ -0.97
DDX39A-202ENST00000324340 TRBV27A0A0K0K1C4 114 aa8.99□□□□□ -0.97
DDX39A-202ENST00000324340 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
DDX39A-202ENST00000324340 A4D1N5 150 aa8.99□□□□□ -0.97
DDX39A-202ENST00000324340 UQCRQO14949 82 aa8.99□□□□□ -0.97
DDX39A-202ENST00000324340 MRAPQ8TCY5 172 aa8.99□□□□□ -0.97
DDX39A-202ENST00000324340 K7EQD1 137 aa8.98□□□□□ -0.97
DDX39A-202ENST00000324340 CXCL5P42830 114 aa8.98□□□□□ -0.97
DDX39A-202ENST00000324340 DAD1P61803 113 aa8.98□□□□□ -0.97
DDX39A-202ENST00000324340 MGAM2Q2M2H8 2515 aa8.98□□□□□ -0.97
DDX39A-202ENST00000324340 TRGV4A0A0C4DH28 118 aa8.97□□□□□ -0.97
DDX39A-202ENST00000324340 VCYO14598 125 aa8.97□□□□□ -0.97
DDX39A-202ENST00000324340 C2orf82Q6UX34 121 aa8.97□□□□□ -0.97
DDX39A-202ENST00000324340 C3orf22Q8N5N4 141 aa8.97□□□□□ -0.97
DDX39A-202ENST00000324340 LINC00526Q96FQ7 95 aa8.97□□□□□ -0.97
DDX39A-202ENST00000324340 B9D2Q9BPU9 175 aa8.97□□□□□ -0.97
DDX39A-202ENST00000324340 Q9UF83 564 aa8.97□□□□□ -0.97
DDX39A-202ENST00000324340 NOTCH1P46531 2555 aa8.96□□□□□ -0.97
DDX39A-202ENST00000324340 RHOHQ15669 191 aa8.96□□□□□ -0.98
DDX39A-202ENST00000324340 A0A0J9YWU9 116 aa8.95□□□□□ -0.98
DDX39A-202ENST00000324340 TMEM223A0PJW6 202 aa8.95□□□□□ -0.98
DDX39A-202ENST00000324340 J3KT08 172 aa8.95□□□□□ -0.98
DDX39A-202ENST00000324340 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
DDX39A-202ENST00000324340 LINC00643Q86TS7 51 aa8.95□□□□□ -0.98
DDX39A-202ENST00000324340 I3L3M4 83 aa8.94□□□□□ -0.98
DDX39A-202ENST00000324340 TSHBP01222 138 aa8.94□□□□□ -0.98
DDX39A-202ENST00000324340 LINC00694P0DN24 101 aa8.94□□□□□ -0.98
DDX39A-202ENST00000324340 SDIM1Q6ZPB5 146 aa8.94□□□□□ -0.98
DDX39A-202ENST00000324340 PRO0255Q9UI72 69 aa8.94□□□□□ -0.98
DDX39A-202ENST00000324340 TEX49A0A1B0GTD5 131 aa8.93□□□□□ -0.98
DDX39A-202ENST00000324340 H7C423 109 aa8.93□□□□□ -0.98
DDX39A-202ENST00000324340 RPL36AP83881 106 aaKnown RBP8.93□□□□□ -0.98
DDX39A-202ENST00000324340 Q1RN00 199 aa8.93□□□□□ -0.98
DDX39A-202ENST00000324340 RPL36ALQ969Q0 106 aaKnown RBP8.93□□□□□ -0.98
DDX39A-202ENST00000324340 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
DDX39A-202ENST00000324340 NBEAL2Q6ZNJ1 2754 aa8.92□□□□□ -0.98
DDX39A-202ENST00000324340 A0A0J9YXY3 114 aa8.92□□□□□ -0.98
DDX39A-202ENST00000324340 LST1O00453 97 aa8.92□□□□□ -0.98
DDX39A-202ENST00000324340 TIMM17BO60830 172 aa8.92□□□□□ -0.98
DDX39A-202ENST00000324340 TSPEAR-AS2P59090 65 aa8.92□□□□□ -0.98
DDX39A-202ENST00000324340 MUSTN1Q8IVN3 82 aa8.92□□□□□ -0.98
DDX39A-202ENST00000324340 ZNRF2Q8NHG8 242 aa8.92□□□□□ -0.98
DDX39A-202ENST00000324340 ICOSQ9Y6W8 199 aa8.92□□□□□ -0.98
DDX39A-202ENST00000324340 TRIAP1O43715 76 aa8.91□□□□□ -0.98
DDX39A-202ENST00000324340 EIF4EBP3O60516 100 aaPredicted RBP8.91□□□□□ -0.98
DDX39A-202ENST00000324340 C9orf153Q5TBE3 101 aa8.91□□□□□ -0.98
DDX39A-202ENST00000324340 DAZ4Q86SG3 579 aaKnown RBP8.91□□□□□ -0.98
DDX39A-202ENST00000324340 OR13C6PQ8NH95 151 aa8.91□□□□□ -0.98
DDX39A-202ENST00000324340 DAZ3Q9NR90 486 aaKnown RBP8.91□□□□□ -0.98
DDX39A-202ENST00000324340 LOC100131303A0A0U1RQF7 123 aa8.9□□□□□ -0.98
DDX39A-202ENST00000324340 C11orf45Q8TAV5 145 aa8.9□□□□□ -0.98
DDX39A-202ENST00000324340 VSIG2Q96IQ7 327 aa8.9□□□□□ -0.98
DDX39A-202ENST00000324340 F5H768 121 aa8.89□□□□□ -0.99
DDX39A-202ENST00000324340 PAX4O43316 350 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms