RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TRAV12-2A0A075B6T6 113 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.48□□□□□ -1.69
CSTF3-201ENST00000323959 VCYO14598 125 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 RPL37AP61513 92 aaKnown RBP4.48□□□□□ -1.69
CSTF3-201ENST00000323959 TP73-AS1Q9UF72 201 aa4.48□□□□□ -1.69
CSTF3-201ENST00000323959 LINC00694P0DN24 101 aa4.47□□□□□ -1.69
CSTF3-201ENST00000323959 CFAP126Q5VTH2 177 aa4.47□□□□□ -1.69
CSTF3-201ENST00000323959 C14orf178Q8N769 122 aaPredicted RBP4.47□□□□□ -1.69
CSTF3-201ENST00000323959 TMEM141Q96I45 108 aa4.47□□□□□ -1.69
CSTF3-201ENST00000323959 TIMM17AQ99595 171 aa4.47□□□□□ -1.69
CSTF3-201ENST00000323959 PYGO1Q9Y3Y4 419 aa4.47□□□□□ -1.69
CSTF3-201ENST00000323959 SMIM13P0DJ93 91 aa4.46□□□□□ -1.7
CSTF3-201ENST00000323959 ZNF876PQ49A33 203 aa4.46□□□□□ -1.7
CSTF3-201ENST00000323959 BOD1L2Q8IYS8 172 aa4.46□□□□□ -1.7
CSTF3-201ENST00000323959 LINC01587Q99440 93 aa4.46□□□□□ -1.7
CSTF3-201ENST00000323959 TIMM21Q9BVV7 248 aa4.46□□□□□ -1.7
CSTF3-201ENST00000323959 SPANXB1Q9NS25 103 aaPredicted RBP4.46□□□□□ -1.7
CSTF3-201ENST00000323959 CYSLTR1Q9Y271 337 aa4.46□□□□□ -1.7
CSTF3-201ENST00000323959 FGF6P10767 208 aa4.46□□□□□ -1.7
CSTF3-201ENST00000323959 FAM19A3Q7Z5A8 133 aa4.46□□□□□ -1.7
CSTF3-201ENST00000323959 TRBV6-4A0A1B0GX49 114 aa4.45□□□□□ -1.7
CSTF3-201ENST00000323959 LYRM9A8MSI8 78 aa4.45□□□□□ -1.7
CSTF3-201ENST00000323959 H7C423 109 aa4.45□□□□□ -1.7
CSTF3-201ENST00000323959 GAGE5Q13069 117 aa4.45□□□□□ -1.7
CSTF3-201ENST00000323959 GAGE6Q13070 117 aa4.45□□□□□ -1.7
CSTF3-201ENST00000323959 SMKR1H3BMG3 65 aa4.45□□□□□ -1.7
CSTF3-201ENST00000323959 I3L3M4 83 aa4.45□□□□□ -1.7
CSTF3-201ENST00000323959 RAB37Q96AX2 223 aa4.45□□□□□ -1.7
CSTF3-201ENST00000323959 ERG28Q9UKR5 140 aa4.45□□□□□ -1.7
CSTF3-201ENST00000323959 DNAH10OSP0CZ25 163 aa4.44□□□□□ -1.7
CSTF3-201ENST00000323959 LINC00173Q6ZV60 143 aa4.44□□□□□ -1.7
CSTF3-201ENST00000323959 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
CSTF3-201ENST00000323959 SPANXA1Q9NS26 97 aa4.44□□□□□ -1.7
CSTF3-201ENST00000323959 CSDC2Q9Y534 153 aaKnown RBP4.44□□□□□ -1.7
CSTF3-201ENST00000323959 IGIPA6NJ69 53 aa4.44□□□□□ -1.7
CSTF3-201ENST00000323959 NAA38Q9BRA0 125 aaKnown RBP4.44□□□□□ -1.7
CSTF3-201ENST00000323959 J3KRW8 73 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 TSHBP01222 138 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 IGKV3-20P01619 116 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 GATA1P15976 413 aaPredicted RBP4.43□□□□□ -1.7
CSTF3-201ENST00000323959 MRPS36P82909 103 aaKnown RBP4.43□□□□□ -1.7
CSTF3-201ENST00000323959 PAPPA-AS1Q5QFB9 102 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 NEXN-AS1Q8NBZ9 246 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 KIR2DL4Q99706 377 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 VCX2Q9H322 139 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 A0A087WX48 190 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 SDHAF1A6NFY7 115 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 SPINK8P0C7L1 97 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 DAZ4Q86SG3 579 aaKnown RBP4.43□□□□□ -1.7
CSTF3-201ENST00000323959 RPL39LQ96EH5 51 aaKnown RBP4.43□□□□□ -1.7
CSTF3-201ENST00000323959 DAZ3Q9NR90 486 aaKnown RBP4.43□□□□□ -1.7
CSTF3-201ENST00000323959 XCL2Q9UBD3 114 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 SS18L2Q9UHA2 77 aa4.43□□□□□ -1.7
CSTF3-201ENST00000323959 TIMM8BQ9Y5J9 83 aaPredicted RBP4.43□□□□□ -1.7
CSTF3-201ENST00000323959 TRAV26-2A0A0B4J265 109 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 PLNP26678 52 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 WFDC2Q14508 124 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 RRN3P1Q2M238 152 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 SCXQ7RTU7 201 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 ATP6V0E2Q8NHE4 81 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 LINC01600Q96MT4 127 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 HIGD1BQ9P298 99 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 SELENOKQ9Y6D0 94 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 E9PLD3 99 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 K7EQD1 137 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 MGPP08493 103 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 FXYD7P58549 80 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 HERV-K104P63124 156 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 C20orf203Q8NBC4 194 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 LOC389332A0A1B0GUA5 103 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 H3BNG1 76 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 UBE2D3P61077 147 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 UBE2D2P62837 147 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 ZNF56Q15929 161 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 ETDBQ3ZM63 59 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 GAGE13Q4V321 117 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 AMELXQ99217 191 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 JPT2Q9H910 190 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 DKK2Q9UBU2 259 aa4.42□□□□□ -1.7
CSTF3-201ENST00000323959 HTN3P15516 51 aa4.41□□□□□ -1.7
CSTF3-201ENST00000323959 C2orf66Q6UXQ4 117 aa4.41□□□□□ -1.7
CSTF3-201ENST00000323959 ANAPC13Q9BS18 74 aa4.41□□□□□ -1.7
CSTF3-201ENST00000323959 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
CSTF3-201ENST00000323959 A0A087WWL8 130 aa4.41□□□□□ -1.7
CSTF3-201ENST00000323959 F8VRH5 84 aa4.41□□□□□ -1.7
CSTF3-201ENST00000323959 TIRAPP58753 221 aa4.41□□□□□ -1.7
CSTF3-201ENST00000323959 HHLA3Q9XRX5 114 aa4.41□□□□□ -1.7
CSTF3-201ENST00000323959 TRBV7-3A0A075B6L6 115 aa4.4□□□□□ -1.7
CSTF3-201ENST00000323959 BAALCQ8WXS3 180 aa4.4□□□□□ -1.7
CSTF3-201ENST00000323959 CHCHD7Q9BUK0 85 aa4.4□□□□□ -1.7
CSTF3-201ENST00000323959 DPM2O94777 84 aa4.4□□□□□ -1.71
CSTF3-201ENST00000323959 FOXI1Q12951 378 aa4.4□□□□□ -1.71
CSTF3-201ENST00000323959 FHL2Q14192 279 aa4.4□□□□□ -1.71
CSTF3-201ENST00000323959 Q6ZUT4 128 aa4.4□□□□□ -1.71
CSTF3-201ENST00000323959 SH2D6Q7Z4S9 175 aa4.4□□□□□ -1.71
CSTF3-201ENST00000323959 TM2D2Q9BX73 214 aa4.4□□□□□ -1.71
CSTF3-201ENST00000323959 CDIP1Q9H305 208 aa4.4□□□□□ -1.71
CSTF3-201ENST00000323959 APOMO95445 188 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 PMVKQ15126 192 aa4.39□□□□□ -1.71
CSTF3-201ENST00000323959 TAL2Q16559 108 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms