RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 SYCNQ0VAF6 134 aa10.23□□□□□ -0.77
HDDC2-201ENST00000318787 SEC11CQ9BY50 192 aa10.23□□□□□ -0.77
HDDC2-201ENST00000318787 A0A096LNI7 61 aa10.22□□□□□ -0.77
HDDC2-201ENST00000318787 APOMO95445 188 aa10.22□□□□□ -0.77
HDDC2-201ENST00000318787 S100PP25815 95 aa10.22□□□□□ -0.77
HDDC2-201ENST00000318787 CIRBPQ14011 172 aaKnown RBP10.22□□□□□ -0.77
HDDC2-201ENST00000318787 KIAA1644Q3SXP7 199 aa10.22□□□□□ -0.77
HDDC2-201ENST00000318787 CAMK2N2Q96S95 79 aa10.22□□□□□ -0.77
HDDC2-201ENST00000318787 IMMP2LQ96T52 175 aa10.22□□□□□ -0.77
HDDC2-201ENST00000318787 STPG4Q8N801 248 aa10.21□□□□□ -0.78
HDDC2-201ENST00000318787 Q8N8P6 123 aa10.21□□□□□ -0.78
HDDC2-201ENST00000318787 MRPS36P82909 103 aaKnown RBP10.2□□□□□ -0.78
HDDC2-201ENST00000318787 SPAG11BQ08648 103 aa10.2□□□□□ -0.78
HDDC2-201ENST00000318787 Q6ZRU5 148 aa10.2□□□□□ -0.78
HDDC2-201ENST00000318787 FAM104AQ969W3 186 aa10.2□□□□□ -0.78
HDDC2-201ENST00000318787 CYSLTR1Q9Y271 337 aa10.2□□□□□ -0.78
HDDC2-201ENST00000318787 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
HDDC2-201ENST00000318787 KRTAP10-4P60372 401 aaPredicted RBP10.19□□□□□ -0.78
HDDC2-201ENST00000318787 C2orf66Q6UXQ4 117 aa10.19□□□□□ -0.78
HDDC2-201ENST00000318787 ORAOV1Q8WV07 137 aa10.19□□□□□ -0.78
HDDC2-201ENST00000318787 TMEM141Q96I45 108 aa10.19□□□□□ -0.78
HDDC2-201ENST00000318787 PKIGQ9Y2B9 76 aa10.19□□□□□ -0.78
HDDC2-201ENST00000318787 TGIF2-C20orf24A0A0A6YYL0 155 aa10.18□□□□□ -0.78
HDDC2-201ENST00000318787 PRSS47A8MTI9 375 aa10.18□□□□□ -0.78
HDDC2-201ENST00000318787 GAGE2BQ13066 116 aa10.18□□□□□ -0.78
HDDC2-201ENST00000318787 ORMDL2Q53FV1 153 aa10.18□□□□□ -0.78
HDDC2-201ENST00000318787 C7orf33Q8WU49 177 aa10.18□□□□□ -0.78
HDDC2-201ENST00000318787 RPS10P5Q9NQ39 176 aa10.18□□□□□ -0.78
HDDC2-201ENST00000318787 Q6ZN92 141 aa10.17□□□□□ -0.78
HDDC2-201ENST00000318787 TEX43Q6ZNM6 134 aa10.17□□□□□ -0.78
HDDC2-201ENST00000318787 C2orf88Q9BSF0 95 aa10.17□□□□□ -0.78
HDDC2-201ENST00000318787 NXT2Q9NPJ8 142 aaKnown RBP10.17□□□□□ -0.78
HDDC2-201ENST00000318787 PLAC8Q9NZF1 115 aa10.17□□□□□ -0.78
HDDC2-201ENST00000318787 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
HDDC2-201ENST00000318787 RPL18AQ02543 176 aaKnown RBP10.16□□□□□ -0.78
HDDC2-201ENST00000318787 ZC2HC1BQ5TFG8 222 aa10.16□□□□□ -0.78
HDDC2-201ENST00000318787 PYGO1Q9Y3Y4 419 aa10.16□□□□□ -0.78
HDDC2-201ENST00000318787 A0A0J9YXV3 536 aa10.15□□□□□ -0.78
HDDC2-201ENST00000318787 LOC107984640A0A0U1RRK4 108 aa10.15□□□□□ -0.78
HDDC2-201ENST00000318787 HNRNPA3P51991 378 aaKnown RBP10.15□□□□□ -0.78
HDDC2-201ENST00000318787 LINC00474Q9P2X8 69 aa10.15□□□□□ -0.78
HDDC2-201ENST00000318787 IGHV3OR16-9A0A0B4J2B5 98 aa10.14□□□□□ -0.79
HDDC2-201ENST00000318787 OR10D4PQ8NGN7 298 aa10.14□□□□□ -0.79
HDDC2-201ENST00000318787 RHEBQ15382 184 aa10.14□□□□□ -0.79
HDDC2-201ENST00000318787 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
HDDC2-201ENST00000318787 C2orf48Q96LS8 159 aa10.14□□□□□ -0.79
HDDC2-201ENST00000318787 VCX2Q9H322 139 aa10.14□□□□□ -0.79
HDDC2-201ENST00000318787 K7EMI3 77 aa10.13□□□□□ -0.79
HDDC2-201ENST00000318787 PTTG1IPP53801 180 aa10.13□□□□□ -0.79
HDDC2-201ENST00000318787 GNB1LQ9BYB4 327 aa10.13□□□□□ -0.79
HDDC2-201ENST00000318787 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
HDDC2-201ENST00000318787 FABP9Q0Z7S8 132 aa10.12□□□□□ -0.79
HDDC2-201ENST00000318787 MRPL18Q9H0U6 180 aaKnown RBP10.12□□□□□ -0.79
HDDC2-201ENST00000318787 CARHSP1Q9Y2V2 147 aaKnown RBP10.12□□□□□ -0.79
HDDC2-201ENST00000318787 NDUFA1O15239 70 aa10.11□□□□□ -0.79
HDDC2-201ENST00000318787 APOC3P02656 99 aa10.11□□□□□ -0.79
HDDC2-201ENST00000318787 UBE2D1P51668 147 aa10.11□□□□□ -0.79
HDDC2-201ENST00000318787 C10orf91Q5T1B1 145 aa10.11□□□□□ -0.79
HDDC2-201ENST00000318787 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
HDDC2-201ENST00000318787 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.1□□□□□ -0.79
HDDC2-201ENST00000318787 G0S2P27469 103 aa10.1□□□□□ -0.79
HDDC2-201ENST00000318787 LINC00173Q6ZV60 143 aa10.1□□□□□ -0.79
HDDC2-201ENST00000318787 A0A087WZ39 114 aa10.09□□□□□ -0.79
HDDC2-201ENST00000318787 IGIPA6NJ69 53 aa10.09□□□□□ -0.79
HDDC2-201ENST00000318787 MT-ND6P03923 174 aa10.09□□□□□ -0.79
HDDC2-201ENST00000318787 COX19Q49B96 90 aa10.09□□□□□ -0.79
HDDC2-201ENST00000318787 UNQ6190/PRO20217Q6UXQ8 127 aa10.09□□□□□ -0.79
HDDC2-201ENST00000318787 SCGB3A1Q96QR1 104 aa10.09□□□□□ -0.79
HDDC2-201ENST00000318787 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
HDDC2-201ENST00000318787 SMCO4Q9NRQ5 59 aa10.09□□□□□ -0.79
HDDC2-201ENST00000318787 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
HDDC2-201ENST00000318787 NDUFA5Q16718 116 aa10.08□□□□□ -0.8
HDDC2-201ENST00000318787 PAPPA-AS1Q5QFB9 102 aa10.08□□□□□ -0.8
HDDC2-201ENST00000318787 C10orf25Q5T742 122 aa10.08□□□□□ -0.8
HDDC2-201ENST00000318787 FA2HQ7L5A8 372 aa10.08□□□□□ -0.8
HDDC2-201ENST00000318787 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
HDDC2-201ENST00000318787 AMELXQ99217 191 aa10.08□□□□□ -0.8
HDDC2-201ENST00000318787 PRSS2P07478 247 aa10.07□□□□□ -0.8
HDDC2-201ENST00000318787 GEMIN7Q9H840 131 aaKnown RBP10.07□□□□□ -0.8
HDDC2-201ENST00000318787 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
HDDC2-201ENST00000318787 OXTP01178 125 aa10.06□□□□□ -0.8
HDDC2-201ENST00000318787 PRR3P79522 188 aaKnown RBP10.06□□□□□ -0.8
HDDC2-201ENST00000318787 C2orf82Q6UX34 121 aa10.06□□□□□ -0.8
HDDC2-201ENST00000318787 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
HDDC2-201ENST00000318787 TIMM17AQ99595 171 aa10.06□□□□□ -0.8
HDDC2-201ENST00000318787 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
HDDC2-201ENST00000318787 A0A1W2PNN7 141 aa10.05□□□□□ -0.8
HDDC2-201ENST00000318787 NPSP0C0P6 89 aa10.05□□□□□ -0.8
HDDC2-201ENST00000318787 RNF151Q2KHN1 245 aa10.05□□□□□ -0.8
HDDC2-201ENST00000318787 GAGE2EQ4V326 116 aa10.05□□□□□ -0.8
HDDC2-201ENST00000318787 C9orf116Q5BN46 136 aaPredicted RBP10.05□□□□□ -0.8
HDDC2-201ENST00000318787 C6orf48Q9UBA6 75 aa10.05□□□□□ -0.8
HDDC2-201ENST00000318787 GAGE2DQ9UEU5 116 aa10.05□□□□□ -0.8
HDDC2-201ENST00000318787 TRAPPC1Q9Y5R8 145 aa10.05□□□□□ -0.8
HDDC2-201ENST00000318787 PKHD1L1Q86WI1 4243 aa10.05□□□□□ -0.8
HDDC2-201ENST00000318787 F8WDY8 70 aa10.04□□□□□ -0.8
HDDC2-201ENST00000318787 SNAPINO95295 136 aa10.04□□□□□ -0.8
HDDC2-201ENST00000318787 ERASQ7Z444 233 aa10.04□□□□□ -0.8
HDDC2-201ENST00000318787 SVBPQ8N300 66 aa10.04□□□□□ -0.8
HDDC2-201ENST00000318787 CKS1BP61024 79 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms