RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 OPRPNQ99935 248 aaPredicted RBP12.35□□□□□ -0.43
SERF1A-201ENST00000317633 SPANXA1Q9NS26 97 aa12.35□□□□□ -0.43
SERF1A-201ENST00000317633 MRPL35Q9NZE8 188 aaKnown RBP12.35□□□□□ -0.43
SERF1A-201ENST00000317633 TNFRSF6BO95407 300 aa12.34□□□□□ -0.43
SERF1A-201ENST00000317633 S100A8P05109 93 aa12.34□□□□□ -0.43
SERF1A-201ENST00000317633 C1orf137Q5JT78 98 aa12.34□□□□□ -0.43
SERF1A-201ENST00000317633 ORAOV1Q8WV07 137 aa12.34□□□□□ -0.43
SERF1A-201ENST00000317633 RPL39P62891 51 aaKnown RBP12.33□□□□□ -0.44
SERF1A-201ENST00000317633 SMIM2Q9BVW6 85 aa12.33□□□□□ -0.44
SERF1A-201ENST00000317633 F8W036 122 aa12.32□□□□□ -0.44
SERF1A-201ENST00000317633 LCE2BO14633 110 aa12.32□□□□□ -0.44
SERF1A-201ENST00000317633 NDUFA1O15239 70 aa12.32□□□□□ -0.44
SERF1A-201ENST00000317633 PHF5AQ7RTV0 110 aaKnown RBP12.32□□□□□ -0.44
SERF1A-201ENST00000317633 IGHV3OR16-9A0A0B4J2B5 98 aa12.31□□□□□ -0.44
SERF1A-201ENST00000317633 HBBP68871 147 aa12.31□□□□□ -0.44
SERF1A-201ENST00000317633 MRPS36P82909 103 aaKnown RBP12.31□□□□□ -0.44
SERF1A-201ENST00000317633 D6R8Y8 96 aa12.3□□□□□ -0.44
SERF1A-201ENST00000317633 RNF213Q63HN8 5207 aa12.3□□□□□ -0.44
SERF1A-201ENST00000317633 IFITM10A6NMD0 228 aa12.29□□□□□ -0.44
SERF1A-201ENST00000317633 PPBPP02775 128 aa12.29□□□□□ -0.44
SERF1A-201ENST00000317633 PEA15Q15121 130 aa12.29□□□□□ -0.44
SERF1A-201ENST00000317633 TLX1NBP0CAT3 122 aa12.28□□□□□ -0.44
SERF1A-201ENST00000317633 MRPL54Q6P161 138 aaKnown RBP12.28□□□□□ -0.44
SERF1A-201ENST00000317633 FAM104AQ969W3 186 aa12.28□□□□□ -0.44
SERF1A-201ENST00000317633 SMDT1Q9H4I9 107 aa12.28□□□□□ -0.44
SERF1A-201ENST00000317633 TGIF2-C20orf24A0A0A6YYL0 155 aa12.27□□□□□ -0.45
SERF1A-201ENST00000317633 DIRC1Q969H9 104 aa12.27□□□□□ -0.45
SERF1A-201ENST00000317633 A0A087WZ39 114 aa12.26□□□□□ -0.45
SERF1A-201ENST00000317633 C9JQL5 133 aa12.26□□□□□ -0.45
SERF1A-201ENST00000317633 NPYP01303 97 aa12.26□□□□□ -0.45
SERF1A-201ENST00000317633 IGLV7-43P04211 117 aa12.26□□□□□ -0.45
SERF1A-201ENST00000317633 RAB5AP20339 215 aa12.26□□□□□ -0.45
SERF1A-201ENST00000317633 IFI27P40305 119 aaPredicted RBP12.26□□□□□ -0.45
SERF1A-201ENST00000317633 UNQ6190/PRO20217Q6UXQ8 127 aa12.25□□□□□ -0.45
SERF1A-201ENST00000317633 A0A1B0GXF2 115 aa12.24□□□□□ -0.45
SERF1A-201ENST00000317633 C10orf25Q5T742 122 aa12.24□□□□□ -0.45
SERF1A-201ENST00000317633 ORMDL3Q8N138 153 aa12.24□□□□□ -0.45
SERF1A-201ENST00000317633 C6orf48Q9UBA6 75 aa12.24□□□□□ -0.45
SERF1A-201ENST00000317633 FAM168BA1KXE4 195 aa12.23□□□□□ -0.45
SERF1A-201ENST00000317633 GAGE2EQ4V326 116 aa12.23□□□□□ -0.45
SERF1A-201ENST00000317633 GAGE2DQ9UEU5 116 aa12.23□□□□□ -0.45
SERF1A-201ENST00000317633 PYGO1Q9Y3Y4 419 aa12.23□□□□□ -0.45
SERF1A-201ENST00000317633 SRSF3P84103 164 aaKnown RBP12.22□□□□□ -0.45
SERF1A-201ENST00000317633 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
SERF1A-201ENST00000317633 FAM19A5Q7Z5A7 132 aaPredicted RBP12.22□□□□□ -0.45
SERF1A-201ENST00000317633 ATP5L2Q7Z4Y8 100 aa12.21□□□□□ -0.45
SERF1A-201ENST00000317633 PRELID3AQ96N28 172 aa12.21□□□□□ -0.45
SERF1A-201ENST00000317633 TRBV30A0A0K0K1B3 111 aa12.2□□□□□ -0.46
SERF1A-201ENST00000317633 H0Y9J4 135 aa12.2□□□□□ -0.46
SERF1A-201ENST00000317633 TMEM141Q96I45 108 aa12.2□□□□□ -0.46
SERF1A-201ENST00000317633 KIAA0087Q14695 138 aa12.19□□□□□ -0.46
SERF1A-201ENST00000317633 LINC00242Q5T6M2 205 aa12.19□□□□□ -0.46
SERF1A-201ENST00000317633 PRR26Q8N8Z3 221 aa12.19□□□□□ -0.46
SERF1A-201ENST00000317633 PACRGQ96M98 296 aaPredicted RBP12.19□□□□□ -0.46
SERF1A-201ENST00000317633 IGLV4-3A0A075B6K6 122 aa12.18□□□□□ -0.46
SERF1A-201ENST00000317633 UBE2BP63146 152 aa12.18□□□□□ -0.46
SERF1A-201ENST00000317633 TEX43Q6ZNM6 134 aa12.18□□□□□ -0.46
SERF1A-201ENST00000317633 LAMTOR2Q9Y2Q5 125 aa12.18□□□□□ -0.46
SERF1A-201ENST00000317633 NDUFC2-KCTD14E9PQ53 114 aa12.17□□□□□ -0.46
SERF1A-201ENST00000317633 M0QXV9 152 aa12.17□□□□□ -0.46
SERF1A-201ENST00000317633 KRTAP11-1Q8IUC1 163 aa12.17□□□□□ -0.46
SERF1A-201ENST00000317633 LINC01561Q8N1V8 128 aa12.17□□□□□ -0.46
SERF1A-201ENST00000317633 C2orf88Q9BSF0 95 aa12.17□□□□□ -0.46
SERF1A-201ENST00000317633 IGLV1-50A0A075B6I6 118 aa12.16□□□□□ -0.46
SERF1A-201ENST00000317633 PRSS47A8MTI9 375 aa12.16□□□□□ -0.46
SERF1A-201ENST00000317633 Q6ZN92 141 aa12.15□□□□□ -0.46
SERF1A-201ENST00000317633 MAP1LC3AQ9H492 121 aa12.15□□□□□ -0.46
SERF1A-201ENST00000317633 LOC389332A0A1B0GUA5 103 aa12.14□□□□□ -0.47
SERF1A-201ENST00000317633 UBE2D1P51668 147 aa12.14□□□□□ -0.47
SERF1A-201ENST00000317633 C2orf82Q6UX34 121 aa12.14□□□□□ -0.47
SERF1A-201ENST00000317633 CYSLTR1Q9Y271 337 aa12.14□□□□□ -0.47
SERF1A-201ENST00000317633 KRTAP7-1Q8IUC3 87 aa12.13□□□□□ -0.47
SERF1A-201ENST00000317633 PRSS2P07478 247 aa12.12□□□□□ -0.47
SERF1A-201ENST00000317633 C4orf48Q5BLP8 95 aa12.12□□□□□ -0.47
SERF1A-201ENST00000317633 C2orf66Q6UXQ4 117 aa12.12□□□□□ -0.47
SERF1A-201ENST00000317633 VCX2Q9H322 139 aa12.12□□□□□ -0.47
SERF1A-201ENST00000317633 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
SERF1A-201ENST00000317633 CKS1BP61024 79 aa12.11□□□□□ -0.47
SERF1A-201ENST00000317633 C9orf129Q5T035 196 aaKnown RBP12.11□□□□□ -0.47
SERF1A-201ENST00000317633 Q8N8P6 123 aa12.11□□□□□ -0.47
SERF1A-201ENST00000317633 NPSP0C0P6 89 aa12.1□□□□□ -0.47
SERF1A-201ENST00000317633 RPL13AP40429 203 aaKnown RBP12.1□□□□□ -0.47
SERF1A-201ENST00000317633 ORMDL2Q53FV1 153 aa12.1□□□□□ -0.47
SERF1A-201ENST00000317633 K7EMI3 77 aa12.09□□□□□ -0.47
SERF1A-201ENST00000317633 KRTAP1-4P0C5Y4 121 aa12.09□□□□□ -0.47
SERF1A-201ENST00000317633 C6orf226Q5I0X4 101 aa12.09□□□□□ -0.47
SERF1A-201ENST00000317633 AMELXQ99217 191 aa12.09□□□□□ -0.47
SERF1A-201ENST00000317633 TOMM7Q9P0U1 55 aa12.09□□□□□ -0.47
SERF1A-201ENST00000317633 A0A1B0GVG6 124 aa12.08□□□□□ -0.48
SERF1A-201ENST00000317633 PNRC1Q12796 327 aaPredicted RBP12.08□□□□□ -0.48
SERF1A-201ENST00000317633 ANAPC16Q96DE5 110 aa12.08□□□□□ -0.48
SERF1A-201ENST00000317633 PAPPA-AS1Q5QFB9 102 aa12.07□□□□□ -0.48
SERF1A-201ENST00000317633 ZC2HC1BQ5TFG8 222 aa12.07□□□□□ -0.48
SERF1A-201ENST00000317633 LINC00173Q6ZV60 143 aa12.07□□□□□ -0.48
SERF1A-201ENST00000317633 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
SERF1A-201ENST00000317633 Q8IZM0 81 aa12.07□□□□□ -0.48
SERF1A-201ENST00000317633 MT-ND4LP03901 98 aa12.06□□□□□ -0.48
SERF1A-201ENST00000317633 SEC11AP67812 179 aa12.06□□□□□ -0.48
SERF1A-201ENST00000317633 LPAP08519 4548 aa12.06□□□□□ -0.48
SERF1A-201ENST00000317633 NUPR1O60356 82 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms