RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 LAMTOR2Q9Y2Q5 125 aa11.11□□□□□ -0.63
TPM1-203ENST00000317516 IFITM10A6NMD0 228 aa11.1□□□□□ -0.63
TPM1-203ENST00000317516 F8WDY8 70 aa11.1□□□□□ -0.63
TPM1-203ENST00000317516 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
TPM1-203ENST00000317516 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
TPM1-203ENST00000317516 IGHV3OR16-9A0A0B4J2B5 98 aa11.09□□□□□ -0.63
TPM1-203ENST00000317516 Q6ZRP5 223 aa11.09□□□□□ -0.63
TPM1-203ENST00000317516 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
TPM1-203ENST00000317516 PYGO1Q9Y3Y4 419 aa11.09□□□□□ -0.63
TPM1-203ENST00000317516 PRSS47A8MTI9 375 aa11.08□□□□□ -0.64
TPM1-203ENST00000317516 MT1HL1P0DM35 61 aa11.08□□□□□ -0.64
TPM1-203ENST00000317516 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
TPM1-203ENST00000317516 FAM104AQ969W3 186 aa11.08□□□□□ -0.64
TPM1-203ENST00000317516 MAP1LC3AQ9H492 121 aa11.08□□□□□ -0.64
TPM1-203ENST00000317516 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
TPM1-203ENST00000317516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
TPM1-203ENST00000317516 SPINK6Q6UWN8 80 aa11.07□□□□□ -0.64
TPM1-203ENST00000317516 LOC389332A0A1B0GUA5 103 aa11.06□□□□□ -0.64
TPM1-203ENST00000317516 RPL18AQ02543 176 aaKnown RBP11.06□□□□□ -0.64
TPM1-203ENST00000317516 IMMP2LQ96T52 175 aa11.06□□□□□ -0.64
TPM1-203ENST00000317516 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
TPM1-203ENST00000317516 FAT3Q8TDW7 4589 aa11.05□□□□□ -0.64
TPM1-203ENST00000317516 NDUFA1O15239 70 aa11.05□□□□□ -0.64
TPM1-203ENST00000317516 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
TPM1-203ENST00000317516 C9orf116Q5BN46 136 aaPredicted RBP11.04□□□□□ -0.64
TPM1-203ENST00000317516 REG3GQ6UW15 175 aa11.04□□□□□ -0.64
TPM1-203ENST00000317516 Q8N8P6 123 aa11.04□□□□□ -0.64
TPM1-203ENST00000317516 TMEM141Q96I45 108 aa11.04□□□□□ -0.64
TPM1-203ENST00000317516 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
TPM1-203ENST00000317516 IGLV4-3A0A075B6K6 122 aa11.03□□□□□ -0.64
TPM1-203ENST00000317516 A0A0J9YXV3 536 aa11.03□□□□□ -0.64
TPM1-203ENST00000317516 Q6ZN92 141 aa11.03□□□□□ -0.64
TPM1-203ENST00000317516 TEX43Q6ZNM6 134 aa11.03□□□□□ -0.64
TPM1-203ENST00000317516 C2orf88Q9BSF0 95 aa11.03□□□□□ -0.64
TPM1-203ENST00000317516 CYSLTR1Q9Y271 337 aa11.03□□□□□ -0.64
TPM1-203ENST00000317516 A0A087WZ39 114 aa11.02□□□□□ -0.65
TPM1-203ENST00000317516 K7EMI3 77 aa11.02□□□□□ -0.65
TPM1-203ENST00000317516 ORMDL2Q53FV1 153 aa11.02□□□□□ -0.65
TPM1-203ENST00000317516 G0S2P27469 103 aa11.01□□□□□ -0.65
TPM1-203ENST00000317516 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
TPM1-203ENST00000317516 CLLU1Q5K131 121 aa11.01□□□□□ -0.65
TPM1-203ENST00000317516 LINC00242Q5T6M2 205 aa11.01□□□□□ -0.65
TPM1-203ENST00000317516 CTDSP1Q9GZU7 261 aa11.01□□□□□ -0.65
TPM1-203ENST00000317516 PKHD1L1Q86WI1 4243 aa11□□□□□ -0.65
TPM1-203ENST00000317516 C2orf66Q6UXQ4 117 aa11□□□□□ -0.65
TPM1-203ENST00000317516 UNQ6190/PRO20217Q6UXQ8 127 aa11□□□□□ -0.65
TPM1-203ENST00000317516 VCX2Q9H322 139 aa11□□□□□ -0.65
TPM1-203ENST00000317516 NXT2Q9NPJ8 142 aaKnown RBP11□□□□□ -0.65
TPM1-203ENST00000317516 MT-ND6P03923 174 aa10.99□□□□□ -0.65
TPM1-203ENST00000317516 NPSP0C0P6 89 aa10.99□□□□□ -0.65
TPM1-203ENST00000317516 TLX1NBP0CAT3 122 aa10.99□□□□□ -0.65
TPM1-203ENST00000317516 LINC01561Q8N1V8 128 aa10.99□□□□□ -0.65
TPM1-203ENST00000317516 UBE2D1P51668 147 aa10.98□□□□□ -0.65
TPM1-203ENST00000317516 C10orf25Q5T742 122 aa10.98□□□□□ -0.65
TPM1-203ENST00000317516 PAPPA-AS1Q5QFB9 102 aa10.97□□□□□ -0.65
TPM1-203ENST00000317516 UQCC3Q6UW78 93 aa10.97□□□□□ -0.65
TPM1-203ENST00000317516 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
TPM1-203ENST00000317516 TRBV30A0A0K0K1B3 111 aa10.96□□□□□ -0.65
TPM1-203ENST00000317516 KIAA0087Q14695 138 aa10.96□□□□□ -0.65
TPM1-203ENST00000317516 PHF5AQ7RTV0 110 aaKnown RBP10.96□□□□□ -0.65
TPM1-203ENST00000317516 PACRGQ96M98 296 aaPredicted RBP10.96□□□□□ -0.65
TPM1-203ENST00000317516 PSORS1C2Q9UIG4 136 aa10.96□□□□□ -0.65
TPM1-203ENST00000317516 PRSS2P07478 247 aa10.95□□□□□ -0.66
TPM1-203ENST00000317516 SEC11AP67812 179 aa10.95□□□□□ -0.66
TPM1-203ENST00000317516 GAGE2EQ4V326 116 aa10.95□□□□□ -0.66
TPM1-203ENST00000317516 AMELXQ99217 191 aa10.95□□□□□ -0.66
TPM1-203ENST00000317516 GAGE2DQ9UEU5 116 aa10.95□□□□□ -0.66
TPM1-203ENST00000317516 TRAV9-1A0A075B6T8 112 aa10.94□□□□□ -0.66
TPM1-203ENST00000317516 IGIPA6NJ69 53 aa10.94□□□□□ -0.66
TPM1-203ENST00000317516 C1orf137Q5JT78 98 aa10.94□□□□□ -0.66
TPM1-203ENST00000317516 TMEM218A2RU14 115 aa10.93□□□□□ -0.66
TPM1-203ENST00000317516 IFITM2Q01629 132 aa10.93□□□□□ -0.66
TPM1-203ENST00000317516 HMCN2Q8NDA2 5059 aa10.92□□□□□ -0.66
TPM1-203ENST00000317516 S100PP25815 95 aa10.92□□□□□ -0.66
TPM1-203ENST00000317516 KRTAP10-8P60410 259 aa10.92□□□□□ -0.66
TPM1-203ENST00000317516 CKS1BP61024 79 aa10.92□□□□□ -0.66
TPM1-203ENST00000317516 NDUFC2-KCTD14E9PQ53 114 aa10.91□□□□□ -0.66
TPM1-203ENST00000317516 HERVK_113P63121 156 aa10.91□□□□□ -0.66
TPM1-203ENST00000317516 C6orf226Q5I0X4 101 aa10.91□□□□□ -0.66
TPM1-203ENST00000317516 ZC2HC1BQ5TFG8 222 aa10.91□□□□□ -0.66
TPM1-203ENST00000317516 C2orf82Q6UX34 121 aa10.91□□□□□ -0.66
TPM1-203ENST00000317516 LINC00173Q6ZV60 143 aa10.91□□□□□ -0.66
TPM1-203ENST00000317516 FAM19A3Q7Z5A8 133 aa10.91□□□□□ -0.66
TPM1-203ENST00000317516 TIMM17AQ99595 171 aa10.91□□□□□ -0.66
TPM1-203ENST00000317516 FAM168BA1KXE4 195 aa10.9□□□□□ -0.66
TPM1-203ENST00000317516 KIAA1644Q3SXP7 199 aa10.9□□□□□ -0.66
TPM1-203ENST00000317516 FAM19A5Q7Z5A7 132 aaPredicted RBP10.9□□□□□ -0.66
TPM1-203ENST00000317516 TOMM6Q96B49 74 aa10.9□□□□□ -0.66
TPM1-203ENST00000317516 GEMIN7Q9H840 131 aaKnown RBP10.9□□□□□ -0.66
TPM1-203ENST00000317516 TOMM7Q9P0U1 55 aa10.9□□□□□ -0.66
TPM1-203ENST00000317516 LINC01549A6NIU2 74 aa10.89□□□□□ -0.67
TPM1-203ENST00000317516 ADCYAP1P18509 176 aa10.89□□□□□ -0.67
TPM1-203ENST00000317516 ALKBH7Q9BT30 221 aaPredicted RBP10.89□□□□□ -0.67
TPM1-203ENST00000317516 SEC11CQ9BY50 192 aa10.89□□□□□ -0.67
TPM1-203ENST00000317516 IGLV7-43P04211 117 aa10.88□□□□□ -0.67
TPM1-203ENST00000317516 ERASQ7Z444 233 aa10.88□□□□□ -0.67
TPM1-203ENST00000317516 Q8IZM0 81 aa10.88□□□□□ -0.67
TPM1-203ENST00000317516 DIRC1Q969H9 104 aa10.88□□□□□ -0.67
TPM1-203ENST00000317516 SCGB3A1Q96QR1 104 aa10.88□□□□□ -0.67
TPM1-203ENST00000317516 GNB1LQ9BYB4 327 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms