RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 PMCHL1Q16048 86 aa9.92□□□□□ -0.82
FOXR1-201ENST00000317011 AMMECR1LQ6DCA0 310 aa9.92□□□□□ -0.82
FOXR1-201ENST00000317011 HNRNPA3P51991 378 aaKnown RBP9.91□□□□□ -0.82
FOXR1-201ENST00000317011 LINC00310P59036 64 aa9.91□□□□□ -0.82
FOXR1-201ENST00000317011 RPL37AP61513 92 aaKnown RBP9.91□□□□□ -0.82
FOXR1-201ENST00000317011 C2orf66Q6UXQ4 117 aa9.91□□□□□ -0.82
FOXR1-201ENST00000317011 C15orf56Q8N910 161 aa9.91□□□□□ -0.82
FOXR1-201ENST00000317011 TMEM18Q96B42 140 aa9.91□□□□□ -0.82
FOXR1-201ENST00000317011 CHCHD1Q96BP2 118 aaKnown RBP9.91□□□□□ -0.82
FOXR1-201ENST00000317011 CYSLTR1Q9Y271 337 aa9.91□□□□□ -0.82
FOXR1-201ENST00000317011 HSBP1O75506 76 aa9.9□□□□□ -0.82
FOXR1-201ENST00000317011 IGHV3-64A0A075B6Q5 118 aa9.89□□□□□ -0.83
FOXR1-201ENST00000317011 GAGE12HA6NDE8 117 aa9.89□□□□□ -0.83
FOXR1-201ENST00000317011 NDUFA6P56556 154 aa9.89□□□□□ -0.83
FOXR1-201ENST00000317011 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
FOXR1-201ENST00000317011 UBE2D4Q9Y2X8 147 aa9.89□□□□□ -0.83
FOXR1-201ENST00000317011 A0A096LNJ9 63 aa9.88□□□□□ -0.83
FOXR1-201ENST00000317011 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
FOXR1-201ENST00000317011 NUPR1O60356 82 aa9.88□□□□□ -0.83
FOXR1-201ENST00000317011 HBDP02042 147 aa9.88□□□□□ -0.83
FOXR1-201ENST00000317011 SERTAD4-AS1Q5TG53 156 aa9.88□□□□□ -0.83
FOXR1-201ENST00000317011 MRPL52Q86TS9 123 aaKnown RBP9.88□□□□□ -0.83
FOXR1-201ENST00000317011 OR5A1Q8NGJ0 315 aa9.88□□□□□ -0.83
FOXR1-201ENST00000317011 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
FOXR1-201ENST00000317011 ZNF25P17030 456 aaPredicted RBP9.87□□□□□ -0.83
FOXR1-201ENST00000317011 G0S2P27469 103 aa9.87□□□□□ -0.83
FOXR1-201ENST00000317011 SMAGPQ0VAQ4 97 aa9.87□□□□□ -0.83
FOXR1-201ENST00000317011 FAM19A2Q8N3H0 131 aa9.87□□□□□ -0.83
FOXR1-201ENST00000317011 SPACA4Q8TDM5 124 aa9.87□□□□□ -0.83
FOXR1-201ENST00000317011 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
FOXR1-201ENST00000317011 TOMM6Q96B49 74 aa9.87□□□□□ -0.83
FOXR1-201ENST00000317011 SPANXA1Q9NS26 97 aa9.87□□□□□ -0.83
FOXR1-201ENST00000317011 A0A087WYN8 130 aa9.86□□□□□ -0.83
FOXR1-201ENST00000317011 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
FOXR1-201ENST00000317011 Q6ZUT4 128 aa9.86□□□□□ -0.83
FOXR1-201ENST00000317011 OPRPNQ99935 248 aaPredicted RBP9.86□□□□□ -0.83
FOXR1-201ENST00000317011 TIMM21Q9BVV7 248 aa9.86□□□□□ -0.83
FOXR1-201ENST00000317011 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
FOXR1-201ENST00000317011 FOXI1Q12951 378 aa9.85□□□□□ -0.83
FOXR1-201ENST00000317011 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
FOXR1-201ENST00000317011 GVQW2A0A096LPI5 108 aaPredicted RBP9.84□□□□□ -0.83
FOXR1-201ENST00000317011 IGKV3OR2-268A0A0C4DH90 116 aa9.84□□□□□ -0.83
FOXR1-201ENST00000317011 CHTF8P0CG12 524 aa9.84□□□□□ -0.83
FOXR1-201ENST00000317011 COA6Q5JTJ3 125 aaKnown RBP9.84□□□□□ -0.83
FOXR1-201ENST00000317011 ZNF664Q8N3J9 261 aa9.84□□□□□ -0.83
FOXR1-201ENST00000317011 PYGO1Q9Y3Y4 419 aa9.84□□□□□ -0.83
FOXR1-201ENST00000317011 IGLV4-3A0A075B6K6 122 aa9.83□□□□□ -0.84
FOXR1-201ENST00000317011 IGIPA6NJ69 53 aa9.83□□□□□ -0.84
FOXR1-201ENST00000317011 PDZD11Q5EBL8 140 aa9.83□□□□□ -0.84
FOXR1-201ENST00000317011 Q6ZRU5 148 aa9.83□□□□□ -0.84
FOXR1-201ENST00000317011 CDC42SE2Q9NRR3 84 aa9.83□□□□□ -0.84
FOXR1-201ENST00000317011 TMA7Q9Y2S6 64 aaKnown RBP9.83□□□□□ -0.84
FOXR1-201ENST00000317011 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
FOXR1-201ENST00000317011 LINC00959A0A1B0GUT2 108 aa9.82□□□□□ -0.84
FOXR1-201ENST00000317011 LINC01549A6NIU2 74 aa9.82□□□□□ -0.84
FOXR1-201ENST00000317011 S100A6P06703 90 aa9.82□□□□□ -0.84
FOXR1-201ENST00000317011 MT1HL1P0DM35 61 aa9.82□□□□□ -0.84
FOXR1-201ENST00000317011 COX6A2Q02221 97 aa9.82□□□□□ -0.84
FOXR1-201ENST00000317011 ERASQ7Z444 233 aa9.82□□□□□ -0.84
FOXR1-201ENST00000317011 FAM104AQ969W3 186 aa9.82□□□□□ -0.84
FOXR1-201ENST00000317011 TIMM17AQ99595 171 aa9.82□□□□□ -0.84
FOXR1-201ENST00000317011 TNXBP22105 4242 aa9.82□□□□□ -0.84
FOXR1-201ENST00000317011 MRPS36P82909 103 aaKnown RBP9.81□□□□□ -0.84
FOXR1-201ENST00000317011 HIGD2BQ4VC39 106 aa9.81□□□□□ -0.84
FOXR1-201ENST00000317011 Q6ZN92 141 aa9.81□□□□□ -0.84
FOXR1-201ENST00000317011 DPH3Q96FX2 82 aa9.81□□□□□ -0.84
FOXR1-201ENST00000317011 TMEM141Q96I45 108 aa9.81□□□□□ -0.84
FOXR1-201ENST00000317011 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.8□□□□□ -0.84
FOXR1-201ENST00000317011 LEPROTL1O95214 131 aa9.8□□□□□ -0.84
FOXR1-201ENST00000317011 FABP4P15090 132 aa9.8□□□□□ -0.84
FOXR1-201ENST00000317011 ZC2HC1BQ5TFG8 222 aa9.8□□□□□ -0.84
FOXR1-201ENST00000317011 LINC00173Q6ZV60 143 aa9.8□□□□□ -0.84
FOXR1-201ENST00000317011 IFITM10A6NMD0 228 aa9.79□□□□□ -0.84
FOXR1-201ENST00000317011 ATP5LO75964 103 aa9.79□□□□□ -0.84
FOXR1-201ENST00000317011 TEX43Q6ZNM6 134 aa9.79□□□□□ -0.84
FOXR1-201ENST00000317011 VCX2Q9H322 139 aa9.79□□□□□ -0.84
FOXR1-201ENST00000317011 UBR4Q5T4S7 5183 aa9.79□□□□□ -0.84
FOXR1-201ENST00000317011 TRAV13-1A0A0B4J241 112 aa9.78□□□□□ -0.84
FOXR1-201ENST00000317011 CCL25O15444 150 aa9.78□□□□□ -0.84
FOXR1-201ENST00000317011 NPSP0C0P6 89 aa9.78□□□□□ -0.84
FOXR1-201ENST00000317011 PAPPA-AS1Q5QFB9 102 aa9.78□□□□□ -0.84
FOXR1-201ENST00000317011 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
FOXR1-201ENST00000317011 IGHV1-58A0A0C4DH39 117 aa9.77□□□□□ -0.85
FOXR1-201ENST00000317011 XCL1P47992 114 aa9.77□□□□□ -0.85
FOXR1-201ENST00000317011 SNRPEP62304 92 aaKnown RBP9.77□□□□□ -0.85
FOXR1-201ENST00000317011 IFI27L1Q96BM0 104 aa9.77□□□□□ -0.85
FOXR1-201ENST00000317011 C2orf88Q9BSF0 95 aa9.77□□□□□ -0.85
FOXR1-201ENST00000317011 HSPB8Q9UJY1 196 aa9.77□□□□□ -0.85
FOXR1-201ENST00000317011 SS18Q15532 418 aa9.76□□□□□ -0.85
FOXR1-201ENST00000317011 HIST3H2BBQ8N257 126 aa9.76□□□□□ -0.85
FOXR1-201ENST00000317011 AMELXQ99217 191 aa9.76□□□□□ -0.85
FOXR1-201ENST00000317011 H0Y8G0 127 aa9.75□□□□□ -0.85
FOXR1-201ENST00000317011 S100A2P29034 98 aa9.75□□□□□ -0.85
FOXR1-201ENST00000317011 PMVKQ15126 192 aa9.75□□□□□ -0.85
FOXR1-201ENST00000317011 MAJINQ3KP22 176 aa9.75□□□□□ -0.85
FOXR1-201ENST00000317011 A0A096LNI7 61 aa9.74□□□□□ -0.85
FOXR1-201ENST00000317011 STPG4Q8N801 248 aa9.74□□□□□ -0.85
FOXR1-201ENST00000317011 CST9LQ9H4G1 147 aa9.74□□□□□ -0.85
FOXR1-201ENST00000317011 LINC00474Q9P2X8 69 aa9.74□□□□□ -0.85
FOXR1-201ENST00000317011 C5orf52A6NGY3 159 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms