RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 KRTDAPP60985 99 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 LYPD6BQ8NI32 183 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 UBE2G2P60604 165 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 UBE2G1P62253 170 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 PET117Q6UWS5 81 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 PRR26Q8N8Z3 221 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 UQCR10Q9UDW1 63 aa3.88□□□□□ -1.79
ITGB1-201ENST00000302278 A0A1W2PNN7 141 aa3.87□□□□□ -1.79
ITGB1-201ENST00000302278 BCL2P10415 239 aa3.87□□□□□ -1.79
ITGB1-201ENST00000302278 HIGD2BQ4VC39 106 aa3.87□□□□□ -1.79
ITGB1-201ENST00000302278 SMIM12Q96EX1 92 aa3.87□□□□□ -1.79
ITGB1-201ENST00000302278 ALKBH7Q9BT30 221 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-201ENST00000302278 AMTP48728 403 aa3.87□□□□□ -1.79
ITGB1-201ENST00000302278 NUP35Q8NFH5 326 aa3.87□□□□□ -1.79
ITGB1-201ENST00000302278 C2orf48Q96LS8 159 aa3.87□□□□□ -1.79
ITGB1-201ENST00000302278 SPANXN1Q5VSR9 72 aa3.87□□□□□ -1.79
ITGB1-201ENST00000302278 TSKUQ8WUA8 353 aa3.87□□□□□ -1.79
ITGB1-201ENST00000302278 C19orf71A6NCJ1 209 aa3.86□□□□□ -1.79
ITGB1-201ENST00000302278 CCL25O15444 150 aa3.86□□□□□ -1.79
ITGB1-201ENST00000302278 SMIM17P0DL12 118 aa3.86□□□□□ -1.79
ITGB1-201ENST00000302278 FGF6P10767 208 aa3.86□□□□□ -1.79
ITGB1-201ENST00000302278 TMSB15BA0A087X1C1 80 aa3.86□□□□□ -1.79
ITGB1-201ENST00000302278 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.86□□□□□ -1.79
ITGB1-201ENST00000302278 TLX1NBP0CAT3 122 aa3.86□□□□□ -1.79
ITGB1-201ENST00000302278 RPS20P60866 119 aaKnown RBP3.86□□□□□ -1.79
ITGB1-201ENST00000302278 MEF2BQ02080 365 aaPredicted RBP3.86□□□□□ -1.79
ITGB1-201ENST00000302278 SYCNQ0VAF6 134 aa3.86□□□□□ -1.79
ITGB1-201ENST00000302278 IFITM10A6NMD0 228 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 UBE2L6O14933 153 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 IMMP2LQ96T52 175 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 LINC00959A0A1B0GUT2 108 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 F2Z2F3 143 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 CTRLP40313 264 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 CD164L2Q6UWJ8 174 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 ORAOV1Q8WV07 137 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 C11orf52Q96A22 123 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 NUDT11Q96G61 164 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 IGLV4-69A0A075B6H9 119 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 F5H697 171 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 MT-ND6P03923 174 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 ESDP10768 282 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 NTF3P20783 257 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 CAMPP49913 170 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 GTF2H5Q6ZYL4 71 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 NUDT10Q8NFP7 164 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 CRCT1Q9UGL9 99 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 LAMTOR2Q9Y2Q5 125 aa3.85□□□□□ -1.79
ITGB1-201ENST00000302278 TRBV6-5A0A0K0K1A5 114 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 J3QR89 54 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 UBE2V1Q13404 147 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 SPATA45Q537H7 98 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 MBD3L1Q8WWY6 194 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 TMEM250H0YL14 139 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 APOMO95445 188 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 HINT1P49773 126 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-201ENST00000302278 CCL20P78556 96 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 COX19Q49B96 90 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 COA6Q5JTJ3 125 aaKnown RBP3.84□□□□□ -1.79
ITGB1-201ENST00000302278 MANBALQ9NQG1 85 aa3.84□□□□□ -1.79
ITGB1-201ENST00000302278 HSBP1O75506 76 aa3.84□□□□□ -1.8
ITGB1-201ENST00000302278 PMCHP20382 165 aa3.84□□□□□ -1.8
ITGB1-201ENST00000302278 TPRXLQ17RH7 258 aa3.84□□□□□ -1.8
ITGB1-201ENST00000302278 C1orf137Q5JT78 98 aa3.84□□□□□ -1.8
ITGB1-201ENST00000302278 RPP21Q9H633 154 aaKnown RBP3.84□□□□□ -1.8
ITGB1-201ENST00000302278 PMCHL1Q16048 86 aa3.83□□□□□ -1.8
ITGB1-201ENST00000302278 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
ITGB1-201ENST00000302278 CSDC2Q9Y534 153 aaKnown RBP3.83□□□□□ -1.8
ITGB1-201ENST00000302278 SMCPP49901 116 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-201ENST00000302278 TRAV1-1A0A0B4J248 108 aa3.83□□□□□ -1.8
ITGB1-201ENST00000302278 C9orf116Q5BN46 136 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-201ENST00000302278 GATD1Q8NB37 220 aa3.83□□□□□ -1.8
ITGB1-201ENST00000302278 NAT8BQ9UHF3 227 aa3.83□□□□□ -1.8
ITGB1-201ENST00000302278 PHF5AQ7RTV0 110 aaKnown RBP3.82□□□□□ -1.8
ITGB1-201ENST00000302278 LINC00526Q96FQ7 95 aa3.82□□□□□ -1.8
ITGB1-201ENST00000302278 CDC42SE2Q9NRR3 84 aa3.82□□□□□ -1.8
ITGB1-201ENST00000302278 MRPL35Q9NZE8 188 aaKnown RBP3.82□□□□□ -1.8
ITGB1-201ENST00000302278 A0A1B0GV72 72 aa3.82□□□□□ -1.8
ITGB1-201ENST00000302278 KRTAP7-1Q8IUC3 87 aa3.82□□□□□ -1.8
ITGB1-201ENST00000302278 SCO2A0A1W2PP80 73 aa3.82□□□□□ -1.8
ITGB1-201ENST00000302278 PDE6DO43924 150 aa3.82□□□□□ -1.8
ITGB1-201ENST00000302278 MGPP08493 103 aa3.82□□□□□ -1.8
ITGB1-201ENST00000302278 RPL23P62829 140 aaKnown RBP3.82□□□□□ -1.8
ITGB1-201ENST00000302278 PRR4Q16378 134 aa3.82□□□□□ -1.8
ITGB1-201ENST00000302278 CHTOPQ9Y3Y2 248 aaKnown RBP3.82□□□□□ -1.8
ITGB1-201ENST00000302278 APCSP02743 223 aa3.81□□□□□ -1.8
ITGB1-201ENST00000302278 GAGE10A6NGK3 116 aa3.81□□□□□ -1.8
ITGB1-201ENST00000302278 ZNF561-AS1K7EIQ3 104 aa3.81□□□□□ -1.8
ITGB1-201ENST00000302278 PAGE4O60829 102 aa3.81□□□□□ -1.8
ITGB1-201ENST00000302278 SS18Q15532 418 aa3.81□□□□□ -1.8
ITGB1-201ENST00000302278 MRPL18Q9H0U6 180 aaKnown RBP3.81□□□□□ -1.8
ITGB1-201ENST00000302278 TSHBP01222 138 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 TRAV9-1A0A075B6T8 112 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 MUC21A0A140T8X8 626 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 NUPR1O60356 82 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 XCL1P47992 114 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 OCIAD2Q56VL3 154 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 AMMECR1LQ6DCA0 310 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 YPEL4Q96NS1 127 aa3.8□□□□□ -1.8
ITGB1-201ENST00000302278 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-201ENST00000302278 IGKV2-29A2NJV5 120 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms