RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 CEBPGP53567 150 aa5.62□□□□□ -1.51
CNOT9-202ENST00000295701 Q6ZUT4 128 aa5.62□□□□□ -1.51
CNOT9-202ENST00000295701 FAM231DQ6ZW35 169 aa5.62□□□□□ -1.51
CNOT9-202ENST00000295701 TMEM191AQ9H0A3 160 aa5.62□□□□□ -1.51
CNOT9-202ENST00000295701 UBE2D4Q9Y2X8 147 aa5.62□□□□□ -1.51
CNOT9-202ENST00000295701 A0A1B0GUT8 65 aa5.61□□□□□ -1.51
CNOT9-202ENST00000295701 HIGD1CA8MV81 97 aa5.61□□□□□ -1.51
CNOT9-202ENST00000295701 IGLV7-43P04211 117 aa5.61□□□□□ -1.51
CNOT9-202ENST00000295701 SLC51BQ86UW2 128 aa5.61□□□□□ -1.51
CNOT9-202ENST00000295701 NRACQ8N912 160 aa5.61□□□□□ -1.51
CNOT9-202ENST00000295701 C2orf48Q96LS8 159 aa5.61□□□□□ -1.51
CNOT9-202ENST00000295701 VCYO14598 125 aa5.6□□□□□ -1.51
CNOT9-202ENST00000295701 FCER1GP30273 86 aa5.6□□□□□ -1.51
CNOT9-202ENST00000295701 TAGLN2P37802 199 aaKnown RBP5.6□□□□□ -1.51
CNOT9-202ENST00000295701 SPAG11BQ08648 103 aa5.6□□□□□ -1.51
CNOT9-202ENST00000295701 C10orf25Q5T742 122 aa5.6□□□□□ -1.51
CNOT9-202ENST00000295701 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
CNOT9-202ENST00000295701 TSKUQ8WUA8 353 aa5.6□□□□□ -1.51
CNOT9-202ENST00000295701 FAM104AQ969W3 186 aa5.6□□□□□ -1.51
CNOT9-202ENST00000295701 A0A087WZ39 114 aa5.59□□□□□ -1.51
CNOT9-202ENST00000295701 TMEM250H0YL14 139 aa5.59□□□□□ -1.51
CNOT9-202ENST00000295701 RPL39P62891 51 aaKnown RBP5.59□□□□□ -1.51
CNOT9-202ENST00000295701 CT83Q5H943 113 aa5.59□□□□□ -1.51
CNOT9-202ENST00000295701 BORCS7Q96B45 105 aa5.59□□□□□ -1.51
CNOT9-202ENST00000295701 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
CNOT9-202ENST00000295701 H0Y9J4 135 aa5.58□□□□□ -1.52
CNOT9-202ENST00000295701 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
CNOT9-202ENST00000295701 SUMO2P61956 95 aaKnown RBP5.58□□□□□ -1.52
CNOT9-202ENST00000295701 BLOC1S1P78537 153 aa5.58□□□□□ -1.52
CNOT9-202ENST00000295701 ALKAL2Q6UX46 152 aa5.58□□□□□ -1.52
CNOT9-202ENST00000295701 UNQ6190/PRO20217Q6UXQ8 127 aa5.58□□□□□ -1.52
CNOT9-202ENST00000295701 FAM19A5Q7Z5A7 132 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-202ENST00000295701 LINC01551Q86U37 167 aa5.58□□□□□ -1.52
CNOT9-202ENST00000295701 ORAOV1Q8WV07 137 aa5.58□□□□□ -1.52
CNOT9-202ENST00000295701 DIRC1Q969H9 104 aa5.58□□□□□ -1.52
CNOT9-202ENST00000295701 MRPL51Q4U2R6 128 aaKnown RBP5.57□□□□□ -1.52
CNOT9-202ENST00000295701 GAGE2EQ4V326 116 aa5.57□□□□□ -1.52
CNOT9-202ENST00000295701 TCTE3Q8IZS6 198 aa5.57□□□□□ -1.52
CNOT9-202ENST00000295701 FAM210AQ96ND0 272 aa5.57□□□□□ -1.52
CNOT9-202ENST00000295701 SMIM7Q9BQ49 75 aa5.57□□□□□ -1.52
CNOT9-202ENST00000295701 OSTCQ9NRP0 149 aa5.57□□□□□ -1.52
CNOT9-202ENST00000295701 MRPL35Q9NZE8 188 aaKnown RBP5.57□□□□□ -1.52
CNOT9-202ENST00000295701 C6orf48Q9UBA6 75 aa5.57□□□□□ -1.52
CNOT9-202ENST00000295701 GAGE2DQ9UEU5 116 aa5.57□□□□□ -1.52
CNOT9-202ENST00000295701 V9GYV3 84 aa5.57□□□□□ -1.52
CNOT9-202ENST00000295701 IGHV3OR16-9A0A0B4J2B5 98 aa5.56□□□□□ -1.52
CNOT9-202ENST00000295701 RIGQ13278 110 aa5.56□□□□□ -1.52
CNOT9-202ENST00000295701 PRR4Q16378 134 aa5.56□□□□□ -1.52
CNOT9-202ENST00000295701 KIR2DL4Q99706 377 aa5.56□□□□□ -1.52
CNOT9-202ENST00000295701 TIMM21Q9BVV7 248 aa5.56□□□□□ -1.52
CNOT9-202ENST00000295701 ZNF727A8MUV8 499 aa5.55□□□□□ -1.52
CNOT9-202ENST00000295701 FAM104BQ5XKR9 115 aa5.55□□□□□ -1.52
CNOT9-202ENST00000295701 OR10D4PQ8NGN7 298 aa5.55□□□□□ -1.52
CNOT9-202ENST00000295701 IMMP2LQ96T52 175 aa5.55□□□□□ -1.52
CNOT9-202ENST00000295701 EIF5A2Q9GZV4 153 aaKnown RBP5.55□□□□□ -1.52
CNOT9-202ENST00000295701 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
CNOT9-202ENST00000295701 IGLV1-50A0A075B6I6 118 aa5.54□□□□□ -1.52
CNOT9-202ENST00000295701 NDUFA1O15239 70 aa5.54□□□□□ -1.52
CNOT9-202ENST00000295701 TCAPO15273 167 aa5.54□□□□□ -1.52
CNOT9-202ENST00000295701 SRP19P09132 144 aaKnown RBP5.54□□□□□ -1.52
CNOT9-202ENST00000295701 TLX1NBP0CAT3 122 aa5.54□□□□□ -1.52
CNOT9-202ENST00000295701 KIAA0087Q14695 138 aa5.54□□□□□ -1.52
CNOT9-202ENST00000295701 M0QXV9 152 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 PPP1R2P9O14990 202 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 PPP1R17O96001 155 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 CKS2P33552 79 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 UBE2BP63146 152 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 SMAGPQ0VAQ4 97 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 C9orf129Q5T035 196 aaKnown RBP5.53□□□□□ -1.52
CNOT9-202ENST00000295701 C2orf82Q6UX34 121 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 TMEM18Q96B42 140 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 SMDT1Q9H4I9 107 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 FAT4Q6V0I7 4981 aa5.53□□□□□ -1.52
CNOT9-202ENST00000295701 TRBV24-1A0A075B6N3 115 aa5.52□□□□□ -1.53
CNOT9-202ENST00000295701 IFITM10A6NMD0 228 aa5.52□□□□□ -1.53
CNOT9-202ENST00000295701 F8WDY8 70 aa5.52□□□□□ -1.53
CNOT9-202ENST00000295701 TNFRSF6BO95407 300 aa5.52□□□□□ -1.53
CNOT9-202ENST00000295701 TSPAN13O95857 204 aa5.52□□□□□ -1.53
CNOT9-202ENST00000295701 RPL23P62829 140 aaKnown RBP5.52□□□□□ -1.53
CNOT9-202ENST00000295701 TMEM241Q24JQ0 296 aa5.52□□□□□ -1.53
CNOT9-202ENST00000295701 FAM74A3Q4VXF1 159 aa5.52□□□□□ -1.53
CNOT9-202ENST00000295701 C20orf78Q9BR46 151 aa5.52□□□□□ -1.53
CNOT9-202ENST00000295701 D6R8Y8 96 aa5.51□□□□□ -1.53
CNOT9-202ENST00000295701 NPYP01303 97 aa5.51□□□□□ -1.53
CNOT9-202ENST00000295701 UBE2D1P51668 147 aa5.51□□□□□ -1.53
CNOT9-202ENST00000295701 RPL32P62910 135 aaKnown RBP5.51□□□□□ -1.53
CNOT9-202ENST00000295701 MRPS36P82909 103 aaKnown RBP5.51□□□□□ -1.53
CNOT9-202ENST00000295701 ZC2HC1BQ5TFG8 222 aa5.51□□□□□ -1.53
CNOT9-202ENST00000295701 SMIM2Q9BVW6 85 aa5.51□□□□□ -1.53
CNOT9-202ENST00000295701 SPANXA1Q9NS26 97 aa5.51□□□□□ -1.53
CNOT9-202ENST00000295701 NAT8BQ9UHF3 227 aa5.51□□□□□ -1.53
CNOT9-202ENST00000295701 SMIM27A0A1W2PRY6 76 aa5.5□□□□□ -1.53
CNOT9-202ENST00000295701 LINC00862A6NCI5 91 aa5.5□□□□□ -1.53
CNOT9-202ENST00000295701 C9JQL5 133 aa5.5□□□□□ -1.53
CNOT9-202ENST00000295701 HBBP68871 147 aa5.5□□□□□ -1.53
CNOT9-202ENST00000295701 LINC00242Q5T6M2 205 aa5.5□□□□□ -1.53
CNOT9-202ENST00000295701 MRPL54Q6P161 138 aaKnown RBP5.5□□□□□ -1.53
CNOT9-202ENST00000295701 LINC00469Q8N7U9 141 aa5.5□□□□□ -1.53
CNOT9-202ENST00000295701 IGLV4-3A0A075B6K6 122 aa5.49□□□□□ -1.53
CNOT9-202ENST00000295701 TGIF2-C20orf24A0A0A6YYL0 155 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms