RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 TNFRSF6BO95407 300 aa8.69□□□□□ -1.02
TPM1-202ENST00000288398 RPL32P62910 135 aaKnown RBP8.69□□□□□ -1.02
TPM1-202ENST00000288398 HBBP68871 147 aa8.69□□□□□ -1.02
TPM1-202ENST00000288398 RNF151Q2KHN1 245 aa8.69□□□□□ -1.02
TPM1-202ENST00000288398 OPRPNQ99935 248 aaPredicted RBP8.69□□□□□ -1.02
TPM1-202ENST00000288398 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
TPM1-202ENST00000288398 TRBV24-1A0A075B6N3 115 aa8.68□□□□□ -1.02
TPM1-202ENST00000288398 TGIF2-C20orf24A0A0A6YYL0 155 aa8.68□□□□□ -1.02
TPM1-202ENST00000288398 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
TPM1-202ENST00000288398 D6R8Y8 96 aa8.68□□□□□ -1.02
TPM1-202ENST00000288398 NDUFA1O15239 70 aa8.68□□□□□ -1.02
TPM1-202ENST00000288398 RAB5AP20339 215 aa8.68□□□□□ -1.02
TPM1-202ENST00000288398 RPL39P62891 51 aaKnown RBP8.68□□□□□ -1.02
TPM1-202ENST00000288398 SRSF9Q13242 221 aaKnown RBP eCLIP8.68□□□□□ -1.02
TPM1-202ENST00000288398 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
TPM1-202ENST00000288398 MRPL54Q6P161 138 aaKnown RBP8.68□□□□□ -1.02
TPM1-202ENST00000288398 PPBPP02775 128 aa8.67□□□□□ -1.02
TPM1-202ENST00000288398 KRTAP10-8P60410 259 aa8.67□□□□□ -1.02
TPM1-202ENST00000288398 SLC7A5P1Q8MH63 180 aa8.67□□□□□ -1.02
TPM1-202ENST00000288398 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
TPM1-202ENST00000288398 PSORS1C2Q9UIG4 136 aa8.67□□□□□ -1.02
TPM1-202ENST00000288398 IFI27P40305 119 aaPredicted RBP8.66□□□□□ -1.02
TPM1-202ENST00000288398 UQCC3Q6UW78 93 aa8.66□□□□□ -1.02
TPM1-202ENST00000288398 PHF5AQ7RTV0 110 aaKnown RBP8.66□□□□□ -1.02
TPM1-202ENST00000288398 A0A087WZ39 114 aa8.65□□□□□ -1.02
TPM1-202ENST00000288398 MRPS36P82909 103 aaKnown RBP8.65□□□□□ -1.02
TPM1-202ENST00000288398 ODF1Q14990 250 aa8.65□□□□□ -1.02
TPM1-202ENST00000288398 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
TPM1-202ENST00000288398 NPYP01303 97 aa8.64□□□□□ -1.03
TPM1-202ENST00000288398 ORMDL3Q8N138 153 aa8.64□□□□□ -1.03
TPM1-202ENST00000288398 DIRC1Q969H9 104 aa8.64□□□□□ -1.03
TPM1-202ENST00000288398 IGHV3OR16-9A0A0B4J2B5 98 aa8.63□□□□□ -1.03
TPM1-202ENST00000288398 TNXBP22105 4242 aa8.63□□□□□ -1.03
TPM1-202ENST00000288398 GAGE2EQ4V326 116 aa8.62□□□□□ -1.03
TPM1-202ENST00000288398 TMEM136Q6ZRR5 245 aa8.62□□□□□ -1.03
TPM1-202ENST00000288398 FAM19A5Q7Z5A7 132 aaPredicted RBP8.62□□□□□ -1.03
TPM1-202ENST00000288398 COMMD7Q86VX2 200 aa8.62□□□□□ -1.03
TPM1-202ENST00000288398 PRELID3AQ96N28 172 aa8.62□□□□□ -1.03
TPM1-202ENST00000288398 C2orf88Q9BSF0 95 aa8.62□□□□□ -1.03
TPM1-202ENST00000288398 GAGE2DQ9UEU5 116 aa8.62□□□□□ -1.03
TPM1-202ENST00000288398 C9JQL5 133 aa8.61□□□□□ -1.03
TPM1-202ENST00000288398 UBE2BP63146 152 aa8.61□□□□□ -1.03
TPM1-202ENST00000288398 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
TPM1-202ENST00000288398 Q6ZN92 141 aa8.61□□□□□ -1.03
TPM1-202ENST00000288398 ATP5L2Q7Z4Y8 100 aa8.61□□□□□ -1.03
TPM1-202ENST00000288398 PACRGQ96M98 296 aaPredicted RBP8.61□□□□□ -1.03
TPM1-202ENST00000288398 A0A1B0GXF2 115 aa8.6□□□□□ -1.03
TPM1-202ENST00000288398 IGLV7-43P04211 117 aa8.6□□□□□ -1.03
TPM1-202ENST00000288398 TLX1NBP0CAT3 122 aa8.6□□□□□ -1.03
TPM1-202ENST00000288398 SRSF3P84103 164 aaKnown RBP8.6□□□□□ -1.03
TPM1-202ENST00000288398 TEX43Q6ZNM6 134 aa8.6□□□□□ -1.03
TPM1-202ENST00000288398 TMEM141Q96I45 108 aa8.6□□□□□ -1.03
TPM1-202ENST00000288398 PRSS2P07478 247 aa8.59□□□□□ -1.03
TPM1-202ENST00000288398 C10orf91Q5T1B1 145 aa8.59□□□□□ -1.03
TPM1-202ENST00000288398 C10orf25Q5T742 122 aa8.59□□□□□ -1.03
TPM1-202ENST00000288398 MAP1LC3AQ9H492 121 aa8.59□□□□□ -1.03
TPM1-202ENST00000288398 C6orf48Q9UBA6 75 aa8.59□□□□□ -1.03
TPM1-202ENST00000288398 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.03
TPM1-202ENST00000288398 LRP2P98164 4655 aa8.59□□□□□ -1.04
TPM1-202ENST00000288398 TRBV30A0A0K0K1B3 111 aa8.58□□□□□ -1.04
TPM1-202ENST00000288398 LOC389332A0A1B0GUA5 103 aa8.58□□□□□ -1.04
TPM1-202ENST00000288398 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
TPM1-202ENST00000288398 M0QXV9 152 aa8.58□□□□□ -1.04
TPM1-202ENST00000288398 LAMTOR2Q9Y2Q5 125 aa8.58□□□□□ -1.04
TPM1-202ENST00000288398 IGLV4-3A0A075B6K6 122 aa8.57□□□□□ -1.04
TPM1-202ENST00000288398 FAM104AQ969W3 186 aa8.57□□□□□ -1.04
TPM1-202ENST00000288398 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
TPM1-202ENST00000288398 NDUFC2-KCTD14E9PQ53 114 aa8.56□□□□□ -1.04
TPM1-202ENST00000288398 H0Y9J4 135 aa8.56□□□□□ -1.04
TPM1-202ENST00000288398 UBE2D1P51668 147 aa8.56□□□□□ -1.04
TPM1-202ENST00000288398 CKS1BP61024 79 aa8.56□□□□□ -1.04
TPM1-202ENST00000288398 LINC00242Q5T6M2 205 aa8.56□□□□□ -1.04
TPM1-202ENST00000288398 VCX2Q9H322 139 aa8.56□□□□□ -1.04
TPM1-202ENST00000288398 TMEM218A2RU14 115 aa8.55□□□□□ -1.04
TPM1-202ENST00000288398 PRR26Q8N8Z3 221 aa8.55□□□□□ -1.04
TPM1-202ENST00000288398 TOMM7Q9P0U1 55 aa8.55□□□□□ -1.04
TPM1-202ENST00000288398 MT-ND4LP03901 98 aa8.54□□□□□ -1.04
TPM1-202ENST00000288398 ORMDL2Q53FV1 153 aa8.54□□□□□ -1.04
TPM1-202ENST00000288398 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
TPM1-202ENST00000288398 C2orf66Q6UXQ4 117 aa8.54□□□□□ -1.04
TPM1-202ENST00000288398 LINC01561Q8N1V8 128 aa8.54□□□□□ -1.04
TPM1-202ENST00000288398 SEC11CQ9BY50 192 aa8.54□□□□□ -1.04
TPM1-202ENST00000288398 CARHSP1Q9Y2V2 147 aaKnown RBP8.54□□□□□ -1.04
TPM1-202ENST00000288398 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
TPM1-202ENST00000288398 G0S2P27469 103 aa8.53□□□□□ -1.04
TPM1-202ENST00000288398 PNRC1Q12796 327 aaPredicted RBP8.53□□□□□ -1.04
TPM1-202ENST00000288398 KIAA0087Q14695 138 aa8.53□□□□□ -1.04
TPM1-202ENST00000288398 C6orf226Q5I0X4 101 aa8.53□□□□□ -1.04
TPM1-202ENST00000288398 PAPPA-AS1Q5QFB9 102 aa8.53□□□□□ -1.04
TPM1-202ENST00000288398 Q8N8P6 123 aa8.53□□□□□ -1.04
TPM1-202ENST00000288398 ANAPC16Q96DE5 110 aa8.53□□□□□ -1.04
TPM1-202ENST00000288398 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
TPM1-202ENST00000288398 SEC11AP67812 179 aa8.52□□□□□ -1.05
TPM1-202ENST00000288398 K7EMI3 77 aa8.51□□□□□ -1.05
TPM1-202ENST00000288398 RPL13AP40429 203 aaKnown RBP8.51□□□□□ -1.05
TPM1-202ENST00000288398 ALKBH7Q9BT30 221 aaPredicted RBP8.51□□□□□ -1.05
TPM1-202ENST00000288398 CTDSP1Q9GZU7 261 aa8.51□□□□□ -1.05
TPM1-202ENST00000288398 GEMIN7Q9H840 131 aaKnown RBP8.51□□□□□ -1.05
TPM1-202ENST00000288398 NPSP0C0P6 89 aa8.5□□□□□ -1.05
TPM1-202ENST00000288398 LBHQ53QV2 105 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms