RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 Q9BRP9 147 aa9.27□□□□□ -0.93
CDH11-201ENST00000268603 CYSRT1A8MQ03 144 aa9.27□□□□□ -0.93
CDH11-201ENST00000268603 LIMD2Q9BT23 127 aa9.27□□□□□ -0.93
CDH11-201ENST00000268603 ATRXP46100 2492 aa9.27□□□□□ -0.93
CDH11-201ENST00000268603 TRAV7A0A075B6U4 112 aa9.26□□□□□ -0.93
CDH11-201ENST00000268603 MAPKAPK5-AS1Q8N8E1 139 aa9.26□□□□□ -0.93
CDH11-201ENST00000268603 Q8NA96 180 aa9.26□□□□□ -0.93
CDH11-201ENST00000268603 H0Y9P7 68 aa9.26□□□□□ -0.93
CDH11-201ENST00000268603 M0QY20 66 aa9.26□□□□□ -0.93
CDH11-201ENST00000268603 VPREB1P12018 145 aa9.25□□□□□ -0.93
CDH11-201ENST00000268603 Q6JHZ5 121 aa9.25□□□□□ -0.93
CDH11-201ENST00000268603 CREBBPQ92793 2442 aa9.25□□□□□ -0.93
CDH11-201ENST00000268603 COX17Q14061 63 aa9.24□□□□□ -0.93
CDH11-201ENST00000268603 MRGPRG-AS1Q2M3A8 158 aa9.24□□□□□ -0.93
CDH11-201ENST00000268603 MSMPQ1L6U9 139 aa9.24□□□□□ -0.93
CDH11-201ENST00000268603 ZNF702PQ9H963 129 aa9.24□□□□□ -0.93
CDH11-201ENST00000268603 FBXL19-AS1Q494R0 122 aa9.23□□□□□ -0.93
CDH11-201ENST00000268603 RNASE3P12724 160 aaKnown RBP9.23□□□□□ -0.93
CDH11-201ENST00000268603 SPAG11AQ6PDA7 123 aa9.23□□□□□ -0.93
CDH11-201ENST00000268603 CRIP2P52943 208 aaPredicted RBP9.23□□□□□ -0.93
CDH11-201ENST00000268603 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
CDH11-201ENST00000268603 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
CDH11-201ENST00000268603 TANC1Q9C0D5 1861 aa9.21□□□□□ -0.93
CDH11-201ENST00000268603 C9orf116Q5BN46 136 aaPredicted RBP9.21□□□□□ -0.93
CDH11-201ENST00000268603 TMEM131Q92545 1883 aa9.21□□□□□ -0.93
CDH11-201ENST00000268603 NCOA6Q14686 2063 aaPredicted RBP9.21□□□□□ -0.94
CDH11-201ENST00000268603 hDV103S1A0JD37 113 aa9.21□□□□□ -0.94
CDH11-201ENST00000268603 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
CDH11-201ENST00000268603 RNF185Q96GF1 192 aa9.21□□□□□ -0.94
CDH11-201ENST00000268603 NTM-AS1Q6ZSK4 140 aa9.2□□□□□ -0.94
CDH11-201ENST00000268603 HCG22E2RYF7 251 aa9.2□□□□□ -0.94
CDH11-201ENST00000268603 UNQ6190/PRO20217Q6UXQ8 127 aa9.2□□□□□ -0.94
CDH11-201ENST00000268603 PSMG3-AS1Q96PY0 264 aa9.2□□□□□ -0.94
CDH11-201ENST00000268603 KRTAP27-1Q3LI81 207 aa9.2□□□□□ -0.94
CDH11-201ENST00000268603 WISP2O76076 250 aa9.19□□□□□ -0.94
CDH11-201ENST00000268603 WDR87Q6ZQQ6 2873 aa9.19□□□□□ -0.94
CDH11-201ENST00000268603 COL4A3Q01955 1670 aa9.19□□□□□ -0.94
CDH11-201ENST00000268603 J3QL48 77 aa9.19□□□□□ -0.94
CDH11-201ENST00000268603 NRACQ8N912 160 aa9.19□□□□□ -0.94
CDH11-201ENST00000268603 HIVEP2P31629 2446 aa9.19□□□□□ -0.94
CDH11-201ENST00000268603 CENPFP49454 3210 aa9.19□□□□□ -0.94
CDH11-201ENST00000268603 PRRC2AP48634 2157 aaKnown RBP9.19□□□□□ -0.94
CDH11-201ENST00000268603 ADAMTS9Q9P2N4 1935 aa9.19□□□□□ -0.94
CDH11-201ENST00000268603 COX6A2Q02221 97 aa9.19□□□□□ -0.94
CDH11-201ENST00000268603 A0A1B0GU69 56 aa9.18□□□□□ -0.94
CDH11-201ENST00000268603 TSHBP01222 138 aa9.18□□□□□ -0.94
CDH11-201ENST00000268603 WNK1Q9H4A3 2382 aa9.18□□□□□ -0.94
CDH11-201ENST00000268603 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
CDH11-201ENST00000268603 Q8IZM0 81 aa9.17□□□□□ -0.94
CDH11-201ENST00000268603 A0A087WSZ3 146 aa9.17□□□□□ -0.94
CDH11-201ENST00000268603 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
CDH11-201ENST00000268603 Q6ZTC4 211 aa9.17□□□□□ -0.94
CDH11-201ENST00000268603 ARHGAP21Q5T5U3 1957 aa9.17□□□□□ -0.94
CDH11-201ENST00000268603 TTC28Q96AY4 2481 aa9.16□□□□□ -0.94
CDH11-201ENST00000268603 A0A087WVE0 104 aa9.16□□□□□ -0.94
CDH11-201ENST00000268603 FREM1Q5H8C1 2179 aa9.16□□□□□ -0.94
CDH11-201ENST00000268603 ZFHX2Q9C0A1 2572 aaPredicted RBP9.16□□□□□ -0.94
CDH11-201ENST00000268603 MUC4Q99102 2169 aa9.15□□□□□ -0.94
CDH11-201ENST00000268603 ACYP2P14621 99 aa9.15□□□□□ -0.94
CDH11-201ENST00000268603 Q9UF83 564 aa9.15□□□□□ -0.94
CDH11-201ENST00000268603 MBD6Q96DN6 1003 aa9.15□□□□□ -0.94
CDH11-201ENST00000268603 BDP1A6H8Y1 2624 aa9.15□□□□□ -0.94
CDH11-201ENST00000268603 EGFEM1PQ0D2K5 195 aa9.15□□□□□ -0.95
CDH11-201ENST00000268603 MED12LQ86YW9 2145 aa9.15□□□□□ -0.95
CDH11-201ENST00000268603 PRR3P79522 188 aaKnown RBP9.14□□□□□ -0.95
CDH11-201ENST00000268603 A0A1W2PNU3 283 aaPredicted RBP9.14□□□□□ -0.95
CDH11-201ENST00000268603 PCNTO95613 3336 aa9.14□□□□□ -0.95
CDH11-201ENST00000268603 OBSL1O75147 1896 aa9.14□□□□□ -0.95
CDH11-201ENST00000268603 LINC00575Q6W349 94 aa9.14□□□□□ -0.95
CDH11-201ENST00000268603 COX6B2Q6YFQ2 88 aa9.13□□□□□ -0.95
CDH11-201ENST00000268603 Q8N814 137 aa9.13□□□□□ -0.95
CDH11-201ENST00000268603 PCNX3Q9H6A9 2034 aa9.13□□□□□ -0.95
CDH11-201ENST00000268603 PCDH15Q96QU1 1955 aa9.12□□□□□ -0.95
CDH11-201ENST00000268603 SORL1Q92673 2214 aa9.12□□□□□ -0.95
CDH11-201ENST00000268603 Q8N3U1 123 aa9.12□□□□□ -0.95
CDH11-201ENST00000268603 Q6ZS46 218 aa9.11□□□□□ -0.95
CDH11-201ENST00000268603 DNAH12Q6ZR08 3092 aa9.11□□□□□ -0.95
CDH11-201ENST00000268603 NUP210Q8TEM1 1887 aaPredicted RBP9.11□□□□□ -0.95
CDH11-201ENST00000268603 TANC2Q9HCD6 1990 aa9.11□□□□□ -0.95
CDH11-201ENST00000268603 CDC42SE2Q9NRR3 84 aa9.11□□□□□ -0.95
CDH11-201ENST00000268603 C2orf16Q68DN1 1984 aa9.11□□□□□ -0.95
CDH11-201ENST00000268603 C1orf64Q8NEQ6 169 aa9.1□□□□□ -0.95
CDH11-201ENST00000268603 PTPRQQ9UMZ3 2332 aa9.1□□□□□ -0.95
CDH11-201ENST00000268603 A0A087WYN8 130 aa9.09□□□□□ -0.95
CDH11-201ENST00000268603 CRIP1P50238 77 aa9.09□□□□□ -0.95
CDH11-201ENST00000268603 PRR14LQ5THK1 2151 aa9.09□□□□□ -0.95
CDH11-201ENST00000268603 MUC7Q8TAX7 377 aa9.08□□□□□ -0.96
CDH11-201ENST00000268603 CEP350Q5VT06 3117 aa9.08□□□□□ -0.96
CDH11-201ENST00000268603 IGLV8-61A0A075B6I0 122 aa9.07□□□□□ -0.96
CDH11-201ENST00000268603 DSCAMO60469 2012 aa9.07□□□□□ -0.96
CDH11-201ENST00000268603 ALPK3Q96L96 1907 aa9.07□□□□□ -0.96
CDH11-201ENST00000268603 TMEM254Q8TBM7 123 aa9.06□□□□□ -0.96
CDH11-201ENST00000268603 PRR9Q5T870 116 aa9.06□□□□□ -0.96
CDH11-201ENST00000268603 YPEL4Q96NS1 127 aa9.06□□□□□ -0.96
CDH11-201ENST00000268603 NHLRC4P0CG21 123 aaPredicted RBP9.05□□□□□ -0.96
CDH11-201ENST00000268603 MOBPQ13875 183 aa9.05□□□□□ -0.96
CDH11-201ENST00000268603 KIAA1549LQ6ZVL6 1849 aa9.05□□□□□ -0.96
CDH11-201ENST00000268603 C11orf71Q6IPW1 123 aa9.05□□□□□ -0.96
CDH11-201ENST00000268603 P0C879 139 aa9.05□□□□□ -0.96
CDH11-201ENST00000268603 SMCR5Q8TEV8 140 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms